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The map label for this gene is 226224525

Identifier: 226224525

GI number: 226224525

Start: 1984067

End: 1984612

Strand: Reverse

Name: 226224525

Synonym: Lm4b_01938

Alternate gene names: NA

Gene position: 1984612-1984067 (Counterclockwise)

Preceding gene: 226224526

Following gene: 226224524

Centisome position: 68.14

GC content: 37.55

Gene sequence:

>546_bases
ATGAAGGCATCCATTTCAATAGACGAGAAGAAAGATTTTATTCGCTGGTTTTTAAATAAACACCAGATGAAGACTAGAGA
AGCAATGTGGGTTTTAAATTATATTGCTGGCCATGATCAAATTGTAAAATATGTTCATTTTGTTGATAATTTGGAAGGGT
GTGCGCGTGGGCTTTCACTTAGTGCTCACGGCGTTGAATCCGAACCGTTCCTATTTTTTAAAGGTAACATTATGACGACT
GATCCAGAAAAAGCATTTCATGATATTCGGTTAAATTGGGACGAAGAGTTGTATGTAGAACTTCATTTTGAAGAGGCAAT
GTCTTCGCCTGAATACGCACTTGTTCGTGAAGATAATCCTTTTACAGCAGTGAAGCTTGCGGATGAGGAAAAAGAAATGG
CGGATGCGCTTATTTATCAATCTGTGCACCAATTTTCAAGAGAAAAAGTATTACAACAGATCGATGAGGCGCTGGATACA
CGTGATGAAGCTGCTTTTCATAAGTTAGTTCGAATTTTACAGCAAATGGATACGGAAAAAGAATAA

Upstream 100 bases:

>100_bases
AAGTTTTGCGTAACTATTTAGAACTAGAGCCAGAAGACACAGAGATTTTATCTTTATTTGATTAAATGCTAAAAAGAATA
CAGGAAGGGACTGAGGAAAG

Downstream 100 bases:

>100_bases
GAAATAAATCCTAGTTAGTATGGAAATGATGTGAAAGATGCATCATTTCCTTGCTGTGCTAGGATTTTTTAAGGGAGCTG
GGGGATATTGTTATATAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKASISIDEKKDFIRWFLNKHQMKTREAMWVLNYIAGHDQIVKYVHFVDNLEGCARGLSLSAHGVESEPFLFFKGNIMTT
DPEKAFHDIRLNWDEELYVELHFEEAMSSPEYALVREDNPFTAVKLADEEKEMADALIYQSVHQFSREKVLQQIDEALDT
RDEAAFHKLVRILQQMDTEKE

Sequences:

>Translated_181_residues
MKASISIDEKKDFIRWFLNKHQMKTREAMWVLNYIAGHDQIVKYVHFVDNLEGCARGLSLSAHGVESEPFLFFKGNIMTT
DPEKAFHDIRLNWDEELYVELHFEEAMSSPEYALVREDNPFTAVKLADEEKEMADALIYQSVHQFSREKVLQQIDEALDT
RDEAAFHKLVRILQQMDTEKE
>Mature_181_residues
MKASISIDEKKDFIRWFLNKHQMKTREAMWVLNYIAGHDQIVKYVHFVDNLEGCARGLSLSAHGVESEPFLFFKGNIMTT
DPEKAFHDIRLNWDEELYVELHFEEAMSSPEYALVREDNPFTAVKLADEEKEMADALIYQSVHQFSREKVLQQIDEALDT
RDEAAFHKLVRILQQMDTEKE

Specific function: Unknown

COG id: COG5582

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0302 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011188
- InterPro:   IPR014957
- InterPro:   IPR014963 [H]

Pfam domain/function: PF08858 IDEAL; PF08864 UPF0302 [H]

EC number: NA

Molecular weight: Translated: 21241; Mature: 21241

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASISIDEKKDFIRWFLNKHQMKTREAMWVLNYIAGHDQIVKYVHFVDNLEGCARGLSL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCC
SAHGVESEPFLFFKGNIMTTDPEKAFHDIRLNWDEELYVELHFEEAMSSPEYALVREDNP
CCCCCCCCCEEEEECCEEECCHHHHHHHCCCCCCCEEEEEEEEHHHHCCCCEEEEECCCC
FTAVKLADEEKEMADALIYQSVHQFSREKVLQQIDEALDTRDEAAFHKLVRILQQMDTEK
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
E
C
>Mature Secondary Structure
MKASISIDEKKDFIRWFLNKHQMKTREAMWVLNYIAGHDQIVKYVHFVDNLEGCARGLSL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCC
SAHGVESEPFLFFKGNIMTTDPEKAFHDIRLNWDEELYVELHFEEAMSSPEYALVREDNP
CCCCCCCCCEEEEECCEEECCHHHHHHHCCCCCCCEEEEEEEEHHHHCCCCEEEEECCCC
FTAVKLADEEKEMADALIYQSVHQFSREKVLQQIDEALDTRDEAAFHKLVRILQQMDTEK
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]