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The map label for this gene is ypiA [H]

Identifier: 226224526

GI number: 226224526

Start: 1984648

End: 1985901

Strand: Reverse

Name: ypiA [H]

Synonym: Lm4b_01939

Alternate gene names: 226224526

Gene position: 1985901-1984648 (Counterclockwise)

Preceding gene: 226224527

Following gene: 226224525

Centisome position: 68.18

GC content: 38.84

Gene sequence:

>1254_bases
ATGGAATTAGCTAATAAAATGTTACATGCGTTAGAGCATGAAGATATGGCGCTTGCGAAGAAATATTTTGATGAAGTAGT
GCAAGCGGGAACAGATGAAGAACAATATTATTTAGCAGAAGAATTATTTACACTTGGATTCCTAGATGAAACGGAAGATT
TATACGAACTTCTATTAGCAAAATACAAGGATGAGGGCGAGTTGCTTGTCCGTGCAGCTGAAGTAGCACTTGAAAAAGAC
GATATCGACTCTGCGCAAGACTATTTAGAAAAAGTAAACAAAGAAGATGAAGCATATATTGAAAGTTTGCTCGTATTAGC
TGATTTATATCAGATGCAAGGTTTATTCGAAGTCAGTGAGCAGAAATTACTCGAAGCGAAACAAATGGCGCCAAATGAGC
CGATTATTGATTTTGCACTTGGGGAATATTATTTATCGCAAGCAAGATTCGCATCCGCTGTACAGTCTTATCAAACTGCT
GTAGAAGCAGGATTAACGATTATTTCGAATGGTGCGGTGTCTGTATATGAACGTATCGCTGAAGCTTTTGCTGCTAGTGG
GGCATTTGAAGAAGCGTTATCTTACTATGAACGCGCGCTCGAAGATAAGGAATCGGTTGATACACTTTTCGGGATGGGTT
TAACGGCTTATCAGGCAAAAGATTACACGAAAGCTATTCATGCGCTCGAACATTTGCGTGAACATGATCCCTCTTACACA
ACGCTCTACTCTTATTTAGCGAAAAGTTATGAGGAGAACGGCGAACCGGAAAAAGCCATTGCAGTGCTTCGGGACGGCTT
AACGCAAGATGAATTTAATAAAGAAATGTTCTTAGAGGCTGGGAAGCTTGCTGTTACGCTACGTTTGCCAGAAGAAGCCG
AAGAATTTTATCGTCAAGCAATTGTGCTAGATGAAGAATATTCGGAAGCAATTATGCAGTTGAACAAATTATTACTTGCG
AAAGAAGACTACGAAGGGGTTATCGAATTAGTGGAAGGCCTTGGGGAAGAAGTTATTTCGGAACCACAAATTTTCTGGGA
CGTAAGTGTTGCATATCAGGAAACAGAACAATATAATAAAGCAAAAGCAAATTATGAACTGGCATACTCGCACTTTACAA
ACAATCCTACTTTCTTAAAGGAATATGGTTTATTTTTAAGGGAAGAAGGAGAGTACGCGAAATCACAAGAAGTTTTGCGT
AACTATTTAGAACTAGAGCCAGAAGACACAGAGATTTTATCTTTATTTGATTAA

Upstream 100 bases:

>100_bases
TCAGCGCTGGTATTTTTATTTAAGAGAGGCAATCACTTTTTCTTATGAGTGAAGTAATGGTATAATAGAAAAACGACTTA
TTATTAAAGAAGGTGCAGAA

Downstream 100 bases:

>100_bases
ATGCTAAAAAGAATACAGGAAGGGACTGAGGAAAGATGAAGGCATCCATTTCAATAGACGAGAAGAAAGATTTTATTCGC
TGGTTTTTAAATAAACACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MELANKMLHALEHEDMALAKKYFDEVVQAGTDEEQYYLAEELFTLGFLDETEDLYELLLAKYKDEGELLVRAAEVALEKD
DIDSAQDYLEKVNKEDEAYIESLLVLADLYQMQGLFEVSEQKLLEAKQMAPNEPIIDFALGEYYLSQARFASAVQSYQTA
VEAGLTIISNGAVSVYERIAEAFAASGAFEEALSYYERALEDKESVDTLFGMGLTAYQAKDYTKAIHALEHLREHDPSYT
TLYSYLAKSYEENGEPEKAIAVLRDGLTQDEFNKEMFLEAGKLAVTLRLPEEAEEFYRQAIVLDEEYSEAIMQLNKLLLA
KEDYEGVIELVEGLGEEVISEPQIFWDVSVAYQETEQYNKAKANYELAYSHFTNNPTFLKEYGLFLREEGEYAKSQEVLR
NYLELEPEDTEILSLFD

Sequences:

>Translated_417_residues
MELANKMLHALEHEDMALAKKYFDEVVQAGTDEEQYYLAEELFTLGFLDETEDLYELLLAKYKDEGELLVRAAEVALEKD
DIDSAQDYLEKVNKEDEAYIESLLVLADLYQMQGLFEVSEQKLLEAKQMAPNEPIIDFALGEYYLSQARFASAVQSYQTA
VEAGLTIISNGAVSVYERIAEAFAASGAFEEALSYYERALEDKESVDTLFGMGLTAYQAKDYTKAIHALEHLREHDPSYT
TLYSYLAKSYEENGEPEKAIAVLRDGLTQDEFNKEMFLEAGKLAVTLRLPEEAEEFYRQAIVLDEEYSEAIMQLNKLLLA
KEDYEGVIELVEGLGEEVISEPQIFWDVSVAYQETEQYNKAKANYELAYSHFTNNPTFLKEYGLFLREEGEYAKSQEVLR
NYLELEPEDTEILSLFD
>Mature_417_residues
MELANKMLHALEHEDMALAKKYFDEVVQAGTDEEQYYLAEELFTLGFLDETEDLYELLLAKYKDEGELLVRAAEVALEKD
DIDSAQDYLEKVNKEDEAYIESLLVLADLYQMQGLFEVSEQKLLEAKQMAPNEPIIDFALGEYYLSQARFASAVQSYQTA
VEAGLTIISNGAVSVYERIAEAFAASGAFEEALSYYERALEDKESVDTLFGMGLTAYQAKDYTKAIHALEHLREHDPSYT
TLYSYLAKSYEENGEPEKAIAVLRDGLTQDEFNKEMFLEAGKLAVTLRLPEEAEEFYRQAIVLDEEYSEAIMQLNKLLLA
KEDYEGVIELVEGLGEEVISEPQIFWDVSVAYQETEQYNKAKANYELAYSHFTNNPTFLKEYGLFLREEGEYAKSQEVLR
NYLELEPEDTEILSLFD

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 47693; Mature: 47693

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELANKMLHALEHEDMALAKKYFDEVVQAGTDEEQYYLAEELFTLGFLDETEDLYELLLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
KYKDEGELLVRAAEVALEKDDIDSAQDYLEKVNKEDEAYIESLLVLADLYQMQGLFEVSE
HCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QKLLEAKQMAPNEPIIDFALGEYYLSQARFASAVQSYQTAVEAGLTIISNGAVSVYERIA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHH
EAFAASGAFEEALSYYERALEDKESVDTLFGMGLTAYQAKDYTKAIHALEHLREHDPSYT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
TLYSYLAKSYEENGEPEKAIAVLRDGLTQDEFNKEMFLEAGKLAVTLRLPEEAEEFYRQA
HHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
IVLDEEYSEAIMQLNKLLLAKEDYEGVIELVEGLGEEVISEPQIFWDVSVAYQETEQYNK
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH
AKANYELAYSHFTNNPTFLKEYGLFLREEGEYAKSQEVLRNYLELEPEDTEILSLFD
HCCCCEEEEHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHCCCC
>Mature Secondary Structure
MELANKMLHALEHEDMALAKKYFDEVVQAGTDEEQYYLAEELFTLGFLDETEDLYELLLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
KYKDEGELLVRAAEVALEKDDIDSAQDYLEKVNKEDEAYIESLLVLADLYQMQGLFEVSE
HCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QKLLEAKQMAPNEPIIDFALGEYYLSQARFASAVQSYQTAVEAGLTIISNGAVSVYERIA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHH
EAFAASGAFEEALSYYERALEDKESVDTLFGMGLTAYQAKDYTKAIHALEHLREHDPSYT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
TLYSYLAKSYEENGEPEKAIAVLRDGLTQDEFNKEMFLEAGKLAVTLRLPEEAEEFYRQA
HHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
IVLDEEYSEAIMQLNKLLLAKEDYEGVIELVEGLGEEVISEPQIFWDVSVAYQETEQYNK
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH
AKANYELAYSHFTNNPTFLKEYGLFLREEGEYAKSQEVLRNYLELEPEDTEILSLFD
HCCCCEEEEHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]