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The map label for this gene is ypjA [H]

Identifier: 226224524

GI number: 226224524

Start: 1983383

End: 1983979

Strand: Reverse

Name: ypjA [H]

Synonym: Lm4b_01937

Alternate gene names: 226224524

Gene position: 1983979-1983383 (Counterclockwise)

Preceding gene: 226224525

Following gene: 226224523

Centisome position: 68.12

GC content: 37.02

Gene sequence:

>597_bases
TTGTTATATAGTTTACTCGCAAATCGGGCCTTTTTACGATTACTTTTCTTTGGTAATTTACTTGGAGCGATTTATGGATA
CATATGGTATTTACCGCAATTACAAATGACAGAGCCGCGCTTTTGGCTGTTTGTACCTGATAGCCCAACGGCGATTTTGT
TCTTCACTTTGGCGCTAGTTGCTTTTCTTGGGAAAAAGCATTGGCCTTTAATGGAGGCACTAGGTTTTGTATGTTTAGTG
AAGTATGGTTTATGGGCAGTTGGTATGAATATTTTTTATATGATTGACCAAGGGATGCTTGTTTGGGGCTCTGTGGCATT
GATTTTGACGCATGGTTTTATGGCAGTAGAAGGAATTCTTTATGCGCCGTTTTATCGTTTTCGAATCGGGCACTTTATGA
TTGCAGCGGTATGGGTATTTCATAATGATGTAATTGATTATGTATTTGGCCAAATGCCGATTTATATGGGGTTAGAAAAA
TACTTACCGGAAATTGGTTATGCGACATTTTGGTTAACGGTATTTGTTCTATGGTTTGTATATGATAAAACGATAAAAAA
TAAGCACTTAACATTAGAATTTCCTCATGATGAGTGA

Upstream 100 bases:

>100_bases
GGAAAAAGAATAAGAAATAAATCCTAGTTAGTATGGAAATGATGTGAAAGATGCATCATTTCCTTGCTGTGCTAGGATTT
TTTAAGGGAGCTGGGGGATA

Downstream 100 bases:

>100_bases
AAGAGGTTGAGTCTTGGTGATAGTTAATTTATACTAAGAACATAAGGATATTCACCGAAAAAAAGTAGTAGGAGGAAGAT
GATTAAATGTCGTTTAGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MLYSLLANRAFLRLLFFGNLLGAIYGYIWYLPQLQMTEPRFWLFVPDSPTAILFFTLALVAFLGKKHWPLMEALGFVCLV
KYGLWAVGMNIFYMIDQGMLVWGSVALILTHGFMAVEGILYAPFYRFRIGHFMIAAVWVFHNDVIDYVFGQMPIYMGLEK
YLPEIGYATFWLTVFVLWFVYDKTIKNKHLTLEFPHDE

Sequences:

>Translated_198_residues
MLYSLLANRAFLRLLFFGNLLGAIYGYIWYLPQLQMTEPRFWLFVPDSPTAILFFTLALVAFLGKKHWPLMEALGFVCLV
KYGLWAVGMNIFYMIDQGMLVWGSVALILTHGFMAVEGILYAPFYRFRIGHFMIAAVWVFHNDVIDYVFGQMPIYMGLEK
YLPEIGYATFWLTVFVLWFVYDKTIKNKHLTLEFPHDE
>Mature_198_residues
MLYSLLANRAFLRLLFFGNLLGAIYGYIWYLPQLQMTEPRFWLFVPDSPTAILFFTLALVAFLGKKHWPLMEALGFVCLV
KYGLWAVGMNIFYMIDQGMLVWGSVALILTHGFMAVEGILYAPFYRFRIGHFMIAAVWVFHNDVIDYVFGQMPIYMGLEK
YLPEIGYATFWLTVFVLWFVYDKTIKNKHLTLEFPHDE

Specific function: Unknown

COG id: COG4347

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009845 [H]

Pfam domain/function: PF07187 DUF1405 [H]

EC number: NA

Molecular weight: Translated: 23201; Mature: 23201

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYSLLANRAFLRLLFFGNLLGAIYGYIWYLPQLQMTEPRFWLFVPDSPTAILFFTLALV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEECCCCHHHHHHHHHHH
AFLGKKHWPLMEALGFVCLVKYGLWAVGMNIFYMIDQGMLVWGSVALILTHGFMAVEGIL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHH
YAPFYRFRIGHFMIAAVWVFHNDVIDYVFGQMPIYMGLEKYLPEIGYATFWLTVFVLWFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
YDKTIKNKHLTLEFPHDE
HHHHHCCCEEEEECCCCC
>Mature Secondary Structure
MLYSLLANRAFLRLLFFGNLLGAIYGYIWYLPQLQMTEPRFWLFVPDSPTAILFFTLALV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEECCCCHHHHHHHHHHH
AFLGKKHWPLMEALGFVCLVKYGLWAVGMNIFYMIDQGMLVWGSVALILTHGFMAVEGIL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHH
YAPFYRFRIGHFMIAAVWVFHNDVIDYVFGQMPIYMGLEKYLPEIGYATFWLTVFVLWFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
YDKTIKNKHLTLEFPHDE
HHHHHCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]