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The map label for this gene is apl [H]

Identifier: 226224473

GI number: 226224473

Start: 1930401

End: 1931024

Strand: Reverse

Name: apl [H]

Synonym: Lm4b_01886

Alternate gene names: 226224473

Gene position: 1931024-1930401 (Counterclockwise)

Preceding gene: 226224474

Following gene: 226224472

Centisome position: 66.3

GC content: 36.7

Gene sequence:

>624_bases
TTGGAAACTTGGATTACAAGTATTATGGCTGATTTTGGCTATATAGGTATTTTTGTTTTGATTATGGTTGAAAACTTGTT
TCCACCTATTCCCTCTGAGATTATCTTAACTTTTGGTGGATTTATGACGACAGTTACATCATTGAATGTCGTGATGGTGA
TTATTGTAGCAACACTAGGTTCTGTTGTGGGCGCAATTTTACTGTATAAAGTCGCTTCTTATTTTGGTAAAGAACGACTC
ACGAAAATTGTATTAAAATACGGCCGGATTTTGCGGCTGAAGGAATCTGATATTGAACGCGCAGAAAGTTTCTTTTTGAA
ATATGGAAGTTGGGCTGTATTTTTATGTAGAATGATTCCACTAATACGAAGCCTGATTTCGATTCCAGCTGGGATGACCA
AGATGAAAATGTCGAGGTTTCTAATTTTGACGACCGCGGGAAGCTTACTTTGGAATACAGTTTTAATTGGACTTGGAGCT
GTGCTTGGGGAGTCATGGAATGAAATTGTTGTTTTTATGGATAGCTTTTCAACAATAATTTATAGCGTCATTGCGATACT
TGTTGTGGTCGGTTTAGGATACTTTTTCCGAGCACGTTTCAAAAAAACACTAGATGAAGAATAA

Upstream 100 bases:

>100_bases
TTTTCTTTTACCAAATTGATTGAAAAAGTAGAGCTAGTATAGTAGAATTGAAAAGCAAGCACTTACTTTAAAAGGGAAAT
AAAGTAAAGGAGTGTGTTTT

Downstream 100 bases:

>100_bases
TGTAGGACCTTGAGGAATGATCTTCAAGGTTTTTCTTTTGTGATTTTCGCTTTCGTGCTATGATAGGTTGGACATAGAAA
GGGGAGTGGACATATGCGGA

Product: alkaline phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
METWITSIMADFGYIGIFVLIMVENLFPPIPSEIILTFGGFMTTVTSLNVVMVIIVATLGSVVGAILLYKVASYFGKERL
TKIVLKYGRILRLKESDIERAESFFLKYGSWAVFLCRMIPLIRSLISIPAGMTKMKMSRFLILTTAGSLLWNTVLIGLGA
VLGESWNEIVVFMDSFSTIIYSVIAILVVVGLGYFFRARFKKTLDEE

Sequences:

>Translated_207_residues
METWITSIMADFGYIGIFVLIMVENLFPPIPSEIILTFGGFMTTVTSLNVVMVIIVATLGSVVGAILLYKVASYFGKERL
TKIVLKYGRILRLKESDIERAESFFLKYGSWAVFLCRMIPLIRSLISIPAGMTKMKMSRFLILTTAGSLLWNTVLIGLGA
VLGESWNEIVVFMDSFSTIIYSVIAILVVVGLGYFFRARFKKTLDEE
>Mature_207_residues
METWITSIMADFGYIGIFVLIMVENLFPPIPSEIILTFGGFMTTVTSLNVVMVIIVATLGSVVGAILLYKVASYFGKERL
TKIVLKYGRILRLKESDIERAESFFLKYGSWAVFLCRMIPLIRSLISIPAGMTKMKMSRFLILTTAGSLLWNTVLIGLGA
VLGESWNEIVVFMDSFSTIIYSVIAILVVVGLGYFFRARFKKTLDEE

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23182; Mature: 23182

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METWITSIMADFGYIGIFVLIMVENLFPPIPSEIILTFGGFMTTVTSLNVVMVIIVATLG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVVGAILLYKVASYFGKERLTKIVLKYGRILRLKESDIERAESFFLKYGSWAVFLCRMIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHH
LIRSLISIPAGMTKMKMSRFLILTTAGSLLWNTVLIGLGAVLGESWNEIVVFMDSFSTII
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
YSVIAILVVVGLGYFFRARFKKTLDEE
HHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
METWITSIMADFGYIGIFVLIMVENLFPPIPSEIILTFGGFMTTVTSLNVVMVIIVATLG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVVGAILLYKVASYFGKERLTKIVLKYGRILRLKESDIERAESFFLKYGSWAVFLCRMIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHH
LIRSLISIPAGMTKMKMSRFLILTTAGSLLWNTVLIGLGAVLGESWNEIVVFMDSFSTII
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
YSVIAILVVVGLGYFFRARFKKTLDEE
HHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]