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The map label for this gene is yqjA [H]

Identifier: 226224472

GI number: 226224472

Start: 1929324

End: 1930307

Strand: Reverse

Name: yqjA [H]

Synonym: Lm4b_01885

Alternate gene names: 226224472

Gene position: 1930307-1929324 (Counterclockwise)

Preceding gene: 226224473

Following gene: 226224471

Centisome position: 66.27

GC content: 39.13

Gene sequence:

>984_bases
ATGCGGATTGGAATGCGAACGGTGAAAACCGCGATTGCAGCGACACTGGCGATAATTTTGGCGGAATGGCTACACTTGGA
ATATGCAGTTTCGGCAGGGATTATCGCAATTTTAAGTGTACAAAATACGAAAAAAGGATCTTTACAACTAGCGATTCAGC
GGGTTTATTCGACCGTTTTGGCACTATCTATTGCTGCCGTATTTTTCATGCTCATTGGTTATAACGCGGTGAGTTTTGGA
CTTTATTTACTGATTTTTATTCCGCTTGCTGTAAGACTGCATGTTGCTGATGGAATTGTGGTGAGCTCGGTACTCGTATC
GCATATTTTACTCGAACAATCATTATCCTTTTTCTGGTTTAAAAATGAACTGTTACTTATGGCAGTTGGCGCTGGCATAG
CGATTATTTTAAATTTATATATGCCAAAAATGGAAGACGAATTAAAACGCAGCCAACAAAAAATAGAAGCAATTATGCGG
CAAATTTTGACGGAAATGACGCAAGGGCTTCGGAATCAGTCGGAGTATCATGATGAGTTTGGCTTATTAAATCAATTAAA
GGGTACATTAGACTATGCACAGGAAAAAGCAGCAAGAAATTTAGACAATCAGTTTTTTGCTTCTTCCCACTATTATTCGC
AGTACGTCGATATGCGGCTTGTGCAATATCGAATTTTAACACAGATGAAACGGCATTTAGTCGCGTTTGATCATTCTTCT
GAGCAAAGTATGGCGCTGGCAGAAATTACAGAAAAAACAGCACAGACGTTAGATGAGCATAATACAGCAGAGGATTTAGT
GGCGGAAATTACTAAGATGGTGCATGAGTTTCGAAGTAGTAAGCTCCCAGAGACACGAGCAGAATTTGAAAATAGAGCGA
TTTTATTCCAATTTATGAATGATTTGCGCTATTTATTAGAAATGAAGCGTGACTTTTATGCGGAGTTTGGACTAAAAGAA
AAAGAAATGACGAGGGGACGATGA

Upstream 100 bases:

>100_bases
AGAATAATGTAGGACCTTGAGGAATGATCTTCAAGGTTTTTCTTTTGTGATTTTCGCTTTCGTGCTATGATAGGTTGGAC
ATAGAAAGGGGAGTGGACAT

Downstream 100 bases:

>100_bases
ACGATGGTTGAAAAAATTGGTCAAGTGATGTTATATGTAGAAAATCAAGCTGCAGTGAGAGATTTTTGGGTAGAAAAATT
AGATTTTGTCGTAGTTTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MRIGMRTVKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTKKGSLQLAIQRVYSTVLALSIAAVFFMLIGYNAVSFG
LYLLIFIPLAVRLHVADGIVVSSVLVSHILLEQSLSFFWFKNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMR
QILTEMTQGLRNQSEYHDEFGLLNQLKGTLDYAQEKAARNLDNQFFASSHYYSQYVDMRLVQYRILTQMKRHLVAFDHSS
EQSMALAEITEKTAQTLDEHNTAEDLVAEITKMVHEFRSSKLPETRAEFENRAILFQFMNDLRYLLEMKRDFYAEFGLKE
KEMTRGR

Sequences:

>Translated_327_residues
MRIGMRTVKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTKKGSLQLAIQRVYSTVLALSIAAVFFMLIGYNAVSFG
LYLLIFIPLAVRLHVADGIVVSSVLVSHILLEQSLSFFWFKNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMR
QILTEMTQGLRNQSEYHDEFGLLNQLKGTLDYAQEKAARNLDNQFFASSHYYSQYVDMRLVQYRILTQMKRHLVAFDHSS
EQSMALAEITEKTAQTLDEHNTAEDLVAEITKMVHEFRSSKLPETRAEFENRAILFQFMNDLRYLLEMKRDFYAEFGLKE
KEMTRGR
>Mature_327_residues
MRIGMRTVKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTKKGSLQLAIQRVYSTVLALSIAAVFFMLIGYNAVSFG
LYLLIFIPLAVRLHVADGIVVSSVLVSHILLEQSLSFFWFKNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMR
QILTEMTQGLRNQSEYHDEFGLLNQLKGTLDYAQEKAARNLDNQFFASSHYYSQYVDMRLVQYRILTQMKRHLVAFDHSS
EQSMALAEITEKTAQTLDEHNTAEDLVAEITKMVHEFRSSKLPETRAEFENRAILFQFMNDLRYLLEMKRDFYAEFGLKE
KEMTRGR

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010343
- InterPro:   IPR021062 [H]

Pfam domain/function: PF06081 DUF939; PF11728 DUF939_C [H]

EC number: NA

Molecular weight: Translated: 37466; Mature: 37466

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGMRTVKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTKKGSLQLAIQRVYSTVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHH
ALSIAAVFFMLIGYNAVSFGLYLLIFIPLAVRLHVADGIVVSSVLVSHILLEQSLSFFWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMRQILTEMTQGLRNQSEYHDEF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
GLLNQLKGTLDYAQEKAARNLDNQFFASSHYYSQYVDMRLVQYRILTQMKRHLVAFDHSS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EQSMALAEITEKTAQTLDEHNTAEDLVAEITKMVHEFRSSKLPETRAEFENRAILFQFMN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHH
DLRYLLEMKRDFYAEFGLKEKEMTRGR
HHHHHHHHHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure
MRIGMRTVKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTKKGSLQLAIQRVYSTVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHH
ALSIAAVFFMLIGYNAVSFGLYLLIFIPLAVRLHVADGIVVSSVLVSHILLEQSLSFFWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMRQILTEMTQGLRNQSEYHDEF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
GLLNQLKGTLDYAQEKAARNLDNQFFASSHYYSQYVDMRLVQYRILTQMKRHLVAFDHSS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EQSMALAEITEKTAQTLDEHNTAEDLVAEITKMVHEFRSSKLPETRAEFENRAILFQFMN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHH
DLRYLLEMKRDFYAEFGLKEKEMTRGR
HHHHHHHHHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]