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The map label for this gene is ypmR [H]

Identifier: 226224465

GI number: 226224465

Start: 1922221

End: 1923006

Strand: Reverse

Name: ypmR [H]

Synonym: Lm4b_01878

Alternate gene names: 226224465

Gene position: 1923006-1922221 (Counterclockwise)

Preceding gene: 226224466

Following gene: 226224464

Centisome position: 66.02

GC content: 34.86

Gene sequence:

>786_bases
ATGACAAAGAAAAAATGGCTGTGGCTTACAGGGAGCGTGCTTGTTATCGCACTTCTTGTTGGCGCAGTTTTTGGTATCAA
GTATTATAAAGAATCAAAAGAAATTCCGATTAATCTCGTTGCCATGGGTGATTCATTAACAGAAGGTGTTGGTGATGAAA
ACAAAGAGGGCGGATATGTCGGCATTATCCCTAAAGAACTAGAAGAAGAATCAAACATTCCAAGCGTAAAAACGAGTAAT
TACGGGGTATCTGGAAACAAAATAACCCAACTCGAAAAACGTTTAAAAACAAACAAAGACTTCCAAGAAGATGTCAAAAA
TGCGAATGTAATAACAATCACCATTGGCGGAAATGATGTCATGGCTATTTTGCAATCTCGTCTGTTAAATGTAAATGTAG
ATGATTTTACAAAAGCAAACAAAGAATTCCAACAAGAGTTAGAGACACTTCTAAAAGACATTCGGTCCTATAACAAAGAT
GCAGCGATATTTTTAATGGGTATTTACAATCCATATACAACTTATTTCAGCGATATCAAACAATTTGACGAGATTATCTC
TGATTGGAATAAAGCTTCCAAGAAAACTATCCAGCAAGATAGCAATGCTTATTTTGTACCTATTGCAAAAGTTTTAGAAG
ATCGAAATGCAGATAATAAAGATAAACCTAATTCGCTACTGTCAGATGATTATTTCCATCCTAATCATAGAGGATATGAG
AAGATGACATCGGAATTAGACAAAGCCATCGTAAAACAATTAAACGAAGGCAATATTCCCAAATAG

Upstream 100 bases:

>100_bases
CAGAAATTCCACTATTTTTTGCAGACCCAGTTATCTCCACACATGCTGGAACTGGTGCGTTTGCATTTATGTACTATACT
GACTAAGTGAGTGATTGCAT

Downstream 100 bases:

>100_bases
AAAGGTGTTAAAATCGTGCAGAGAGAAACACGATCGGCTCCAAAAAAACCAAAACGTAATTATTGGAAATGGGTATGTAT
CACATTAATTAGTGTACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MTKKKWLWLTGSVLVIALLVGAVFGIKYYKESKEIPINLVAMGDSLTEGVGDENKEGGYVGIIPKELEEESNIPSVKTSN
YGVSGNKITQLEKRLKTNKDFQEDVKNANVITITIGGNDVMAILQSRLLNVNVDDFTKANKEFQQELETLLKDIRSYNKD
AAIFLMGIYNPYTTYFSDIKQFDEIISDWNKASKKTIQQDSNAYFVPIAKVLEDRNADNKDKPNSLLSDDYFHPNHRGYE
KMTSELDKAIVKQLNEGNIPK

Sequences:

>Translated_261_residues
MTKKKWLWLTGSVLVIALLVGAVFGIKYYKESKEIPINLVAMGDSLTEGVGDENKEGGYVGIIPKELEEESNIPSVKTSN
YGVSGNKITQLEKRLKTNKDFQEDVKNANVITITIGGNDVMAILQSRLLNVNVDDFTKANKEFQQELETLLKDIRSYNKD
AAIFLMGIYNPYTTYFSDIKQFDEIISDWNKASKKTIQQDSNAYFVPIAKVLEDRNADNKDKPNSLLSDDYFHPNHRGYE
KMTSELDKAIVKQLNEGNIPK
>Mature_260_residues
TKKKWLWLTGSVLVIALLVGAVFGIKYYKESKEIPINLVAMGDSLTEGVGDENKEGGYVGIIPKELEEESNIPSVKTSNY
GVSGNKITQLEKRLKTNKDFQEDVKNANVITITIGGNDVMAILQSRLLNVNVDDFTKANKEFQQELETLLKDIRSYNKDA
AIFLMGIYNPYTTYFSDIKQFDEIISDWNKASKKTIQQDSNAYFVPIAKVLEDRNADNKDKPNSLLSDDYFHPNHRGYEK
MTSELDKAIVKQLNEGNIPK

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: NA

Molecular weight: Translated: 29515; Mature: 29384

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKKWLWLTGSVLVIALLVGAVFGIKYYKESKEIPINLVAMGDSLTEGVGDENKEGGYV
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCCCEE
GIIPKELEEESNIPSVKTSNYGVSGNKITQLEKRLKTNKDFQEDVKNANVITITIGGNDV
EECCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCHHH
MAILQSRLLNVNVDDFTKANKEFQQELETLLKDIRSYNKDAAIFLMGIYNPYTTYFSDIK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH
QFDEIISDWNKASKKTIQQDSNAYFVPIAKVLEDRNADNKDKPNSLLSDDYFHPNHRGYE
HHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
KMTSELDKAIVKQLNEGNIPK
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TKKKWLWLTGSVLVIALLVGAVFGIKYYKESKEIPINLVAMGDSLTEGVGDENKEGGYV
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCCCEE
GIIPKELEEESNIPSVKTSNYGVSGNKITQLEKRLKTNKDFQEDVKNANVITITIGGNDV
EECCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCHHH
MAILQSRLLNVNVDDFTKANKEFQQELETLLKDIRSYNKDAAIFLMGIYNPYTTYFSDIK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH
QFDEIISDWNKASKKTIQQDSNAYFVPIAKVLEDRNADNKDKPNSLLSDDYFHPNHRGYE
HHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
KMTSELDKAIVKQLNEGNIPK
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 3145906 [H]