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The map label for this gene is ypmS [H]

Identifier: 226224464

GI number: 226224464

Start: 1921591

End: 1922205

Strand: Reverse

Name: ypmS [H]

Synonym: Lm4b_01877

Alternate gene names: 226224464

Gene position: 1922205-1921591 (Counterclockwise)

Preceding gene: 226224465

Following gene: 226224463

Centisome position: 65.99

GC content: 36.59

Gene sequence:

>615_bases
GTGCAGAGAGAAACACGATCGGCTCCAAAAAAACCAAAACGTAATTATTGGAAATGGGTATGTATCACATTAATTAGTGT
ACTTCTAATTTCTGCTGGCTGGATTTATGTAGCAGTATTCAAACTCAGCCCGCAAGATGAACCCTCGCCATCCCTTATTA
GCAATAAATCAATGGTTGAATTTCAAACGAGTACAACAAAAGCTGACTTAAACCAATTGATTAGTTCTTATATAGAAGAT
TTTAGCAAAGATCAAGATATCGGTTATAAAGTTTTCGTCGCAAATAATGTTAATTTTACTGCCGAAGCTGAAATTTTTGG
TGAACCAGTCGAACTACGCTTGAAATTCTCACCGGAAGTTGTCGATAATGGCAATGTTGAGTTGACGCTTAAAGATATGT
CTGTTGGCGCTTTGCCACTGCCCGTGTCTTACGTAATGAACTATGTAAGCAAAAACTATAAATTCCCTGATTGGGTGACA
ATTATGCCTAAAAAGGAAAAAATCTACCTTTCCCTAGATAAACTAAAACTGCAAGGCGGCACAAAAGTACGTGCTGATAC
ACTAAATTTGAAGAAAGATGACATTTCGTTTACACTTTTAGTACCAGTTAAGTAA

Upstream 100 bases:

>100_bases
TAATCATAGAGGATATGAGAAGATGACATCGGAATTAGACAAAGCCATCGTAAAACAATTAAACGAAGGCAATATTCCCA
AATAGAAAGGTGTTAAAATC

Downstream 100 bases:

>100_bases
TTTGGCTGGCTGAATCCTAGTTAGGGGGCATTTTTATGACAAAAGAATCACTTGAAAAAGCAACATTTGCTGGAGGATGC
TTTTGGTGTATGGTAAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MQRETRSAPKKPKRNYWKWVCITLISVLLISAGWIYVAVFKLSPQDEPSPSLISNKSMVEFQTSTTKADLNQLISSYIED
FSKDQDIGYKVFVANNVNFTAEAEIFGEPVELRLKFSPEVVDNGNVELTLKDMSVGALPLPVSYVMNYVSKNYKFPDWVT
IMPKKEKIYLSLDKLKLQGGTKVRADTLNLKKDDISFTLLVPVK

Sequences:

>Translated_204_residues
MQRETRSAPKKPKRNYWKWVCITLISVLLISAGWIYVAVFKLSPQDEPSPSLISNKSMVEFQTSTTKADLNQLISSYIED
FSKDQDIGYKVFVANNVNFTAEAEIFGEPVELRLKFSPEVVDNGNVELTLKDMSVGALPLPVSYVMNYVSKNYKFPDWVT
IMPKKEKIYLSLDKLKLQGGTKVRADTLNLKKDDISFTLLVPVK
>Mature_204_residues
MQRETRSAPKKPKRNYWKWVCITLISVLLISAGWIYVAVFKLSPQDEPSPSLISNKSMVEFQTSTTKADLNQLISSYIED
FSKDQDIGYKVFVANNVNFTAEAEIFGEPVELRLKFSPEVVDNGNVELTLKDMSVGALPLPVSYVMNYVSKNYKFPDWVT
IMPKKEKIYLSLDKLKLQGGTKVRADTLNLKKDDISFTLLVPVK

Specific function: Unknown

COG id: COG4698

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018672 [H]

Pfam domain/function: PF09911 DUF2140 [H]

EC number: NA

Molecular weight: Translated: 23179; Mature: 23179

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRETRSAPKKPKRNYWKWVCITLISVLLISAGWIYVAVFKLSPQDEPSPSLISNKSMVE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCCEEE
FQTSTTKADLNQLISSYIEDFSKDQDIGYKVFVANNVNFTAEAEIFGEPVELRLKFSPEV
EECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEHEECCCCEEEEEEECCCE
VDNGNVELTLKDMSVGALPLPVSYVMNYVSKNYKFPDWVTIMPKKEKIYLSLDKLKLQGG
ECCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEEEEECCC
TKVRADTLNLKKDDISFTLLVPVK
CEEEEEECCCCCCCCEEEEEEECC
>Mature Secondary Structure
MQRETRSAPKKPKRNYWKWVCITLISVLLISAGWIYVAVFKLSPQDEPSPSLISNKSMVE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCCEEE
FQTSTTKADLNQLISSYIEDFSKDQDIGYKVFVANNVNFTAEAEIFGEPVELRLKFSPEV
EECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEHEECCCCEEEEEEECCCE
VDNGNVELTLKDMSVGALPLPVSYVMNYVSKNYKFPDWVTIMPKKEKIYLSLDKLKLQGG
ECCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEEEEECCC
TKVRADTLNLKKDDISFTLLVPVK
CEEEEEECCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]