Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is yloU [H]
Identifier: 226224418
GI number: 226224418
Start: 1876543
End: 1876908
Strand: Reverse
Name: yloU [H]
Synonym: Lm4b_01831
Alternate gene names: 226224418
Gene position: 1876908-1876543 (Counterclockwise)
Preceding gene: 226224420
Following gene: 226224417
Centisome position: 64.44
GC content: 35.52
Gene sequence:
>366_bases ATGGCAATTGAAATCGACACAAAGCTAGGCAAAATTGACATTACTAGTGATGTTATTGCAACAATCGCTGGTGGAGCTGC CGAAGAAAATTTTGGCATCGTTGGAATGGCAAGTAGACACCAAATTCGTGATGGTTTGACAGATATTTTAAGAAGAGAAA ATTATACTAAAGGTGTTATAGTTAGACAAGAAGAAGAAGGTATTCATATTGACATGTATATCATTGTTAGCTTTGGAACA AAAATTTCCGAAGTTGCGCATAATGTTCAAGAACGCGTCAAATACACACTAGAAAAAACACTCGGTATTACAGTGGAATC AGTGAATATTTATGTTCAAGGTGTCCGAGTAATCAAGGAATCTTAA
Upstream 100 bases:
>100_bases CTGATTATAGTAAAATAGGTAGGGACGACTTTATAATTAAATAAAAATCAATACTAAAAAATAATCGAACGAGAATATAA TCCGTAGGGAGGAATATAGA
Downstream 100 bases:
>100_bases GGAGGATTATGTAAGTGAGTATATATCAGTTAGACTCAGAGAAATTTGCAGCAATGATAGCGCTTGGAGCAGAGAATTTA GCAAAAAATGCTGATTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MAIEIDTKLGKIDITSDVIATIAGGAAEENFGIVGMASRHQIRDGLTDILRRENYTKGVIVRQEEEGIHIDMYIIVSFGT KISEVAHNVQERVKYTLEKTLGITVESVNIYVQGVRVIKES
Sequences:
>Translated_121_residues MAIEIDTKLGKIDITSDVIATIAGGAAEENFGIVGMASRHQIRDGLTDILRRENYTKGVIVRQEEEGIHIDMYIIVSFGT KISEVAHNVQERVKYTLEKTLGITVESVNIYVQGVRVIKES >Mature_120_residues AIEIDTKLGKIDITSDVIATIAGGAAEENFGIVGMASRHQIRDGLTDILRRENYTKGVIVRQEEEGIHIDMYIIVSFGTK ISEVAHNVQERVKYTLEKTLGITVESVNIYVQGVRVIKES
Specific function: Unknown
COG id: COG1302
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asp23 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005531 [H]
Pfam domain/function: PF03780 DUF322 [H]
EC number: NA
Molecular weight: Translated: 13419; Mature: 13287
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIEIDTKLGKIDITSDVIATIAGGAAEENFGIVGMASRHQIRDGLTDILRRENYTKGVI CEEEECCCCCEEEEHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCEE VRQEEEGIHIDMYIIVSFGTKISEVAHNVQERVKYTLEKTLGITVESVNIYVQGVRVIKE EEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEEEEEEEC S C >Mature Secondary Structure AIEIDTKLGKIDITSDVIATIAGGAAEENFGIVGMASRHQIRDGLTDILRRENYTKGVI EEEECCCCCEEEEHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCEE VRQEEEGIHIDMYIIVSFGTKISEVAHNVQERVKYTLEKTLGITVESVNIYVQGVRVIKE EEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEEEEEEEC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]