Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is yloV [H]
Identifier: 226224417
GI number: 226224417
Start: 1874870
End: 1876528
Strand: Reverse
Name: yloV [H]
Synonym: Lm4b_01830
Alternate gene names: 226224417
Gene position: 1876528-1874870 (Counterclockwise)
Preceding gene: 226224418
Following gene: 226224416
Centisome position: 64.43
GC content: 39.9
Gene sequence:
>1659_bases GTGAGTATATATCAGTTAGACTCAGAGAAATTTGCAGCAATGATAGCGCTTGGAGCAGAGAATTTAGCAAAAAATGCTGA TTTTGTAGATTCATTGAATGTCTTCCCGGTTCCAGATGGTGACACGGGAACGAATATGAATCTATCGATGACAAGTGGAG CAGAAGAAGTTGCGAAAAATGACAAAGAAACAATTAGTGCCGTTGGAGCAAACTTGGCTAAAGGCTTACTAATGGGTGCC CGCGGGAACTCTGGTGTTATTTTATCCCAACTTTTCCGAGGATTTTCTAAAGCGATTGAAAATAAAGAAACGTTAAACGC GGAAGAATTTGCTGGTGCTTTCGTTAAAGGCGTGGAAACTGCCTACAAAGCTGTCATGAAGCCAGTCGAAGGAACCATCC TAACCGTAGCTCGTGAAGCCGCAAAAGCCGGAGTTGCAGCAGCAAGTGAACATCAAGATATCGAATTAGTAATGGAAGCA ATTTTAAAACAAGGGAAAGTCGCATTAGAAAAAACACCAGATTTACTTCCAGTTTTAAAAGAAGTTGGTGTTGTCGATAG TGGTGGACAAGGTCTTATCATTATTTATGAAGGATTTTATGGCGCACTAACTGGCAAAATGGCTGAAGCTCCTGACTATA TGGCATCTATGGGTGAGCTAATTAATGCCGAACATCATCGTCATGTGCAAGACTTTATGTCAACGGAAGATATTCATTTT GGTTACTGTACCGAAATTATCGTGAAAATCAACGAAAACAAACCCGGTCAAAAACCTTTTGACGAAGAACAGTTCCGTCA AGATTTAAGTAAACTGGGGGATTCTCTACTAGTAGCTGCGGACGATGAAGTAGTAAAAGTACATGTCCATGTGGAACATC CTGGTGAAGTACTAAACTACGGTCAGCAATACGGTAGTCTACTTAAAATGAAAGTGGAAAATATGCGCGAACAGCATACT GAGATTGTTGGTGATGACAAAGTGCCAGCAAAAGAAAAAGCGGCTTATGGTATTGTTACTGTTTCAGCTGGAGAAGGATT GAAGAAACTATTTGAGAGCATGGGAGTGTCTGTTGTTCTTTCAGGTGGTCAAACAATGAATCCAAGTACAGAAGATATCG TAAAAGCAATTGAATCAGCAAATGCAGAACAAGTTTTTGTTCTTCCAAATAATAAAAATATCCAAATGGCTGCGGAACAA GCGGCACAAATTCTAGGAGATGATAAAGTTCAAATCATCCCTACAAAAACAATTCCACAAGGACTTACTGCCGTTCTTTC ATTCCAAGCAGATCAAGATTTCCTAGCTAATGCAGAAGCAATGAAAGCAGCAATTGAAGACGTAGCAAGTGGCCAAGTAA CGACAGCTGTACGTGATACAACAGTAGAAGGTGTCGAAATCAAAAAAGACAGCTTCATCGGTATGGTTGAAGGCAAAATC AAAGTTAGTTGTGCAACATTAGAAGAAGCCGCTTACGAAACACTGGAAAAACTACTTGATGATGATAGCGAAATCATTAC TATCATTGTTGGTGAAGATGCAGATACTTCAAAAGCAGAAACGCTTGCTGATAAAGTAACAGAAGCATTCCCTGATGTCG AAGTAGAAATTCACGAAGGCGACCAACCAGTTTATCCGTATATTTTTGCTGTAGAATAA
Upstream 100 bases:
>100_bases AATACACACTAGAAAAAACACTCGGTATTACAGTGGAATCAGTGAATATTTATGTTCAAGGTGTCCGAGTAATCAAGGAA TCTTAAGGAGGATTATGTAA
Downstream 100 bases:
>100_bases AGACGCCTCTGTAAATGAATAGAAGAAAGGATGATTTTAGTGAAATTTAATAGCGTATTTGATATTATTGGTCCTGTAAT GATTGGTCCGTCAAGTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MSIYQLDSEKFAAMIALGAENLAKNADFVDSLNVFPVPDGDTGTNMNLSMTSGAEEVAKNDKETISAVGANLAKGLLMGA RGNSGVILSQLFRGFSKAIENKETLNAEEFAGAFVKGVETAYKAVMKPVEGTILTVAREAAKAGVAAASEHQDIELVMEA ILKQGKVALEKTPDLLPVLKEVGVVDSGGQGLIIIYEGFYGALTGKMAEAPDYMASMGELINAEHHRHVQDFMSTEDIHF GYCTEIIVKINENKPGQKPFDEEQFRQDLSKLGDSLLVAADDEVVKVHVHVEHPGEVLNYGQQYGSLLKMKVENMREQHT EIVGDDKVPAKEKAAYGIVTVSAGEGLKKLFESMGVSVVLSGGQTMNPSTEDIVKAIESANAEQVFVLPNNKNIQMAAEQ AAQILGDDKVQIIPTKTIPQGLTAVLSFQADQDFLANAEAMKAAIEDVASGQVTTAVRDTTVEGVEIKKDSFIGMVEGKI KVSCATLEEAAYETLEKLLDDDSEIITIIVGEDADTSKAETLADKVTEAFPDVEVEIHEGDQPVYPYIFAVE
Sequences:
>Translated_552_residues MSIYQLDSEKFAAMIALGAENLAKNADFVDSLNVFPVPDGDTGTNMNLSMTSGAEEVAKNDKETISAVGANLAKGLLMGA RGNSGVILSQLFRGFSKAIENKETLNAEEFAGAFVKGVETAYKAVMKPVEGTILTVAREAAKAGVAAASEHQDIELVMEA ILKQGKVALEKTPDLLPVLKEVGVVDSGGQGLIIIYEGFYGALTGKMAEAPDYMASMGELINAEHHRHVQDFMSTEDIHF GYCTEIIVKINENKPGQKPFDEEQFRQDLSKLGDSLLVAADDEVVKVHVHVEHPGEVLNYGQQYGSLLKMKVENMREQHT EIVGDDKVPAKEKAAYGIVTVSAGEGLKKLFESMGVSVVLSGGQTMNPSTEDIVKAIESANAEQVFVLPNNKNIQMAAEQ AAQILGDDKVQIIPTKTIPQGLTAVLSFQADQDFLANAEAMKAAIEDVASGQVTTAVRDTTVEGVEIKKDSFIGMVEGKI KVSCATLEEAAYETLEKLLDDDSEIITIIVGEDADTSKAETLADKVTEAFPDVEVEIHEGDQPVYPYIFAVE >Mature_551_residues SIYQLDSEKFAAMIALGAENLAKNADFVDSLNVFPVPDGDTGTNMNLSMTSGAEEVAKNDKETISAVGANLAKGLLMGAR GNSGVILSQLFRGFSKAIENKETLNAEEFAGAFVKGVETAYKAVMKPVEGTILTVAREAAKAGVAAASEHQDIELVMEAI LKQGKVALEKTPDLLPVLKEVGVVDSGGQGLIIIYEGFYGALTGKMAEAPDYMASMGELINAEHHRHVQDFMSTEDIHFG YCTEIIVKINENKPGQKPFDEEQFRQDLSKLGDSLLVAADDEVVKVHVHVEHPGEVLNYGQQYGSLLKMKVENMREQHTE IVGDDKVPAKEKAAYGIVTVSAGEGLKKLFESMGVSVVLSGGQTMNPSTEDIVKAIESANAEQVFVLPNNKNIQMAAEQA AQILGDDKVQIIPTKTIPQGLTAVLSFQADQDFLANAEAMKAAIEDVASGQVTTAVRDTTVEGVEIKKDSFIGMVEGKIK VSCATLEEAAYETLEKLLDDDSEIITIIVGEDADTSKAETLADKVTEAFPDVEVEIHEGDQPVYPYIFAVE
Specific function: Unknown
COG id: COG1461
COG function: function code R; Predicted kinase related to dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaL domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004007 - InterPro: IPR019986 [H]
Pfam domain/function: PF02734 Dak2 [H]
EC number: NA
Molecular weight: Translated: 59327; Mature: 59196
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIYQLDSEKFAAMIALGAENLAKNADFVDSLNVFPVPDGDTGTNMNLSMTSGAEEVAKN CCEEECCHHHHHHHHHHCHHHHHCCCCHHHCCCEEECCCCCCCCCEEEEECCCHHHHHCC DKETISAVGANLAKGLLMGARGNSGVILSQLFRGFSKAIENKETLNAEEFAGAFVKGVET HHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH AYKAVMKPVEGTILTVAREAAKAGVAAASEHQDIELVMEAILKQGKVALEKTPDLLPVLK HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHH EVGVVDSGGQGLIIIYEGFYGALTGKMAEAPDYMASMGELINAEHHRHVQDFMSTEDIHF HCCCCCCCCCEEEEEEECCHHHHCCCHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCC GYCTEIIVKINENKPGQKPFDEEQFRQDLSKLGDSLLVAADDEVVKVHVHVEHPGEVLNY EEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCHHHHHH GQQYGSLLKMKVENMREQHTEIVGDDKVPAKEKAAYGIVTVSAGEGLKKLFESMGVSVVL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEEEECCHHHHHHHHHCCCEEEE SGGQTMNPSTEDIVKAIESANAEQVFVLPNNKNIQMAAEQAAQILGDDKVQIIPTKTIPQ ECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHH GLTAVLSFQADQDFLANAEAMKAAIEDVASGQVTTAVRDTTVEGVEIKKDSFIGMVEGKI HHHHHHEECCCHHHHHCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCEEEEECCEE KVSCATLEEAAYETLEKLLDDDSEIITIIVGEDADTSKAETLADKVTEAFPDVEVEIHEG EEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECC DQPVYPYIFAVE CCCCCCEEEEEC >Mature Secondary Structure SIYQLDSEKFAAMIALGAENLAKNADFVDSLNVFPVPDGDTGTNMNLSMTSGAEEVAKN CEEECCHHHHHHHHHHCHHHHHCCCCHHHCCCEEECCCCCCCCCEEEEECCCHHHHHCC DKETISAVGANLAKGLLMGARGNSGVILSQLFRGFSKAIENKETLNAEEFAGAFVKGVET HHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH AYKAVMKPVEGTILTVAREAAKAGVAAASEHQDIELVMEAILKQGKVALEKTPDLLPVLK HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHH EVGVVDSGGQGLIIIYEGFYGALTGKMAEAPDYMASMGELINAEHHRHVQDFMSTEDIHF HCCCCCCCCCEEEEEEECCHHHHCCCHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCC GYCTEIIVKINENKPGQKPFDEEQFRQDLSKLGDSLLVAADDEVVKVHVHVEHPGEVLNY EEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCHHHHHH GQQYGSLLKMKVENMREQHTEIVGDDKVPAKEKAAYGIVTVSAGEGLKKLFESMGVSVVL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEEEECCHHHHHHHHHCCCEEEE SGGQTMNPSTEDIVKAIESANAEQVFVLPNNKNIQMAAEQAAQILGDDKVQIIPTKTIPQ ECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHH GLTAVLSFQADQDFLANAEAMKAAIEDVASGQVTTAVRDTTVEGVEIKKDSFIGMVEGKI HHHHHHEECCCHHHHHCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCEEEEECCEE KVSCATLEEAAYETLEKLLDDDSEIITIIVGEDADTSKAETLADKVTEAFPDVEVEIHEG EEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECC DQPVYPYIFAVE CCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]