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The map label for this gene is sdaAB [H]

Identifier: 226224416

GI number: 226224416

Start: 1874168

End: 1874830

Strand: Reverse

Name: sdaAB [H]

Synonym: Lm4b_01829

Alternate gene names: 226224416

Gene position: 1874830-1874168 (Counterclockwise)

Preceding gene: 226224417

Following gene: 226224415

Centisome position: 64.37

GC content: 39.82

Gene sequence:

>663_bases
GTGAAATTTAATAGCGTATTTGATATTATTGGTCCTGTAATGATTGGTCCGTCAAGTTCTCATACTGCCGGTGCTAGTCG
TATTGGTGCCATTGCACGAGCTGTTTTTAATGAACAACCATCCCAAGTAGATATTCATTTATATGGTTCTTTTGCCAAAA
CCTATAAAGGTCATGGTACTGATGTAGCTTTGATTGGCGGATTGCTCGGCTTTGAGCCAGATGATCCGCGCATGAAAGAA
TCTCCGAAGCTTGCTGAAGAGTGGGGCATGCGCATTCAGTTTATCGAAGAAGTAGAAGAGCCACCTCATCCAAATACGGT
AAAGCTAGTATTAAAACATGGTATGCAACAAATGACATTAATTGGTGCATCCATTGGTGGCGGAAAAGTAGAGATTATTC
GCTTAAACGAATTTGAACTAGAATTTACTGGAACTGCTCCAGCTATCCTTATTTTACATCAAGACAAATTTGGCGCGATT
GCTGCAGTATCTTCCGTGATTGCCGACCATAAAATCAATATCGGACAAATGAAAGTGTCCCGTAAAGTAAAAGGCGATGA
AGCGTTAATGGTCATTGAAGTAGACCAACAAGTTGAACAAGCTTTAATTAGCAAAATTGCTGAATTACCAGGGATTTATC
AAGTAGCAAGTGTCATGATTTAG

Upstream 100 bases:

>100_bases
CGAAGTAGAAATTCACGAAGGCGACCAACCAGTTTATCCGTATATTTTTGCTGTAGAATAAAGACGCCTCTGTAAATGAA
TAGAAGAAAGGATGATTTTA

Downstream 100 bases:

>100_bases
TAGTTTTCTAGTAAATCGGTGGCTTTCGCTCGATTTGTGTAAAGCCAAATGTGCGTAAACAAAACGTGCATTTGGCTTTA
TTTTGAGTTGTAAATCAGGT

Product: L-serine dehydratase (beta chain)

Products: NA

Alternate protein names: SDH; L-serine deaminase; L-SD [H]

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKFNSVFDIIGPVMIGPSSSHTAGASRIGAIARAVFNEQPSQVDIHLYGSFAKTYKGHGTDVALIGGLLGFEPDDPRMKE
SPKLAEEWGMRIQFIEEVEEPPHPNTVKLVLKHGMQQMTLIGASIGGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAI
AAVSSVIADHKINIGQMKVSRKVKGDEALMVIEVDQQVEQALISKIAELPGIYQVASVMI

Sequences:

>Translated_220_residues
MKFNSVFDIIGPVMIGPSSSHTAGASRIGAIARAVFNEQPSQVDIHLYGSFAKTYKGHGTDVALIGGLLGFEPDDPRMKE
SPKLAEEWGMRIQFIEEVEEPPHPNTVKLVLKHGMQQMTLIGASIGGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAI
AAVSSVIADHKINIGQMKVSRKVKGDEALMVIEVDQQVEQALISKIAELPGIYQVASVMI
>Mature_220_residues
MKFNSVFDIIGPVMIGPSSSHTAGASRIGAIARAVFNEQPSQVDIHLYGSFAKTYKGHGTDVALIGGLLGFEPDDPRMKE
SPKLAEEWGMRIQFIEEVEEPPHPNTVKLVLKHGMQQMTLIGASIGGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAI
AAVSSVIADHKINIGQMKVSRKVKGDEALMVIEVDQQVEQALISKIAELPGIYQVASVMI

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG1760

COG function: function code E; L-serine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR004643
- InterPro:   IPR005131 [H]

Pfam domain/function: PF01842 ACT; PF03315 SDH_beta [H]

EC number: =4.3.1.17 [H]

Molecular weight: Translated: 23843; Mature: 23843

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFNSVFDIIGPVMIGPSSSHTAGASRIGAIARAVFNEQPSQVDIHLYGSFAKTYKGHGT
CCCCHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHCCCCC
DVALIGGLLGFEPDDPRMKESPKLAEEWGMRIQFIEEVEEPPHPNTVKLVLKHGMQQMTL
CHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEHHHHCCCCCCCHHHHHHHHCCCEEEE
IGASIGGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVS
EEEECCCCEEEEEEEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEE
RKVKGDEALMVIEVDQQVEQALISKIAELPGIYQVASVMI
HCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MKFNSVFDIIGPVMIGPSSSHTAGASRIGAIARAVFNEQPSQVDIHLYGSFAKTYKGHGT
CCCCHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHCCCCC
DVALIGGLLGFEPDDPRMKESPKLAEEWGMRIQFIEEVEEPPHPNTVKLVLKHGMQQMTL
CHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEHHHHCCCCCCCHHHHHHHHCCCEEEE
IGASIGGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVS
EEEECCCCEEEEEEEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEE
RKVKGDEALMVIEVDQQVEQALISKIAELPGIYQVASVMI
HCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]