Click here to switch to the map view.

The map label for this gene is ypgQ [H]

Identifier: 226224380

GI number: 226224380

Start: 1840512

End: 1841120

Strand: Reverse

Name: ypgQ [H]

Synonym: Lm4b_01793

Alternate gene names: 226224380

Gene position: 1841120-1840512 (Counterclockwise)

Preceding gene: 226224383

Following gene: 226224379

Centisome position: 63.21

GC content: 35.96

Gene sequence:

>609_bases
ATGATGAAGCAAGAAGAAATAATAATTGCAGCGCAAAAATGGATGCAATCCCATTTCGAAAAGGAAACTACTGGACACGA
CTGGGAACATATTAAACGAGTCTGGCATTTAAGTAAACAAATCCAAGCAACAGAAGGCGGAGATAAATTTGCAATCGAAT
TAGCAGCATTGTTTCACGACTATAATGATAGCAAACTAACATCAGATCCAGCACAAGCAACAGAAGTAATCACGCATTGG
ATGAAAGGAAAAGAAATACCTGAAGAGATAATCAGTAAAATCATCCGAATCATCCAATCAGTCTCATTTAAAAATGGGAA
AAATCCTACCCAAGCTTCTACAATAGAAGAAAAAATAGTTCAAGATGCAGACCGCTTAGATGCAATTGGTGCAATTGGTA
TAGCTAGAACATTTACATACGGAGGGGCGCACAATAGAGAAATCGCTAATCGAGATCATCCGGAAAATACCACATTACAA
CACTTTTACGATAAATTGCTCCTAATTCAAAAACAGCTAAAAACAAAGACTGGTCGGGAACTTGCAGGAGAAAAACAAAA
AATTATGCAGGAATTTATACATGCACTAGAGAAAGAATTAAAAATATAA

Upstream 100 bases:

>100_bases
TCACGCTTTAAACAAACATTCTCAAAAGCAAACATCGAATACCCCATTTCCATTTTCTACTATTGTACATGAAAATAACG
TAAAAAAGGAGCCAATACTA

Downstream 100 bases:

>100_bases
CTTAAAAGGCTTGTATTTAATATAAAGCTGTTATATAATGATAAAGCTGAATTGATACAAATTAATTCATCAAAAACATT
TTAAAAATAGTTGTTGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MMKQEEIIIAAQKWMQSHFEKETTGHDWEHIKRVWHLSKQIQATEGGDKFAIELAALFHDYNDSKLTSDPAQATEVITHW
MKGKEIPEEIISKIIRIIQSVSFKNGKNPTQASTIEEKIVQDADRLDAIGAIGIARTFTYGGAHNREIANRDHPENTTLQ
HFYDKLLLIQKQLKTKTGRELAGEKQKIMQEFIHALEKELKI

Sequences:

>Translated_202_residues
MMKQEEIIIAAQKWMQSHFEKETTGHDWEHIKRVWHLSKQIQATEGGDKFAIELAALFHDYNDSKLTSDPAQATEVITHW
MKGKEIPEEIISKIIRIIQSVSFKNGKNPTQASTIEEKIVQDADRLDAIGAIGIARTFTYGGAHNREIANRDHPENTTLQ
HFYDKLLLIQKQLKTKTGRELAGEKQKIMQEFIHALEKELKI
>Mature_202_residues
MMKQEEIIIAAQKWMQSHFEKETTGHDWEHIKRVWHLSKQIQATEGGDKFAIELAALFHDYNDSKLTSDPAQATEVITHW
MKGKEIPEEIISKIIRIIQSVSFKNGKNPTQASTIEEKIVQDADRLDAIGAIGIARTFTYGGAHNREIANRDHPENTTLQ
HFYDKLLLIQKQLKTKTGRELAGEKQKIMQEFIHALEKELKI

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1788273, Length=205, Percent_Identity=30.2439024390244, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23227; Mature: 23227

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKQEEIIIAAQKWMQSHFEKETTGHDWEHIKRVWHLSKQIQATEGGDKFAIELAALFHD
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
YNDSKLTSDPAQATEVITHWMKGKEIPEEIISKIIRIIQSVSFKNGKNPTQASTIEEKIV
CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
QDADRLDAIGAIGIARTFTYGGAHNREIANRDHPENTTLQHFYDKLLLIQKQLKTKTGRE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAGEKQKIMQEFIHALEKELKI
HCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMKQEEIIIAAQKWMQSHFEKETTGHDWEHIKRVWHLSKQIQATEGGDKFAIELAALFHD
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
YNDSKLTSDPAQATEVITHWMKGKEIPEEIISKIIRIIQSVSFKNGKNPTQASTIEEKIV
CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
QDADRLDAIGAIGIARTFTYGGAHNREIANRDHPENTTLQHFYDKLLLIQKQLKTKTGRE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAGEKQKIMQEFIHALEKELKI
HCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]