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The map label for this gene is 226224379

Identifier: 226224379

GI number: 226224379

Start: 1834602

End: 1835126

Strand: Reverse

Name: 226224379

Synonym: Lm4b_01790

Alternate gene names: NA

Gene position: 1835126-1834602 (Counterclockwise)

Preceding gene: 226224380

Following gene: 226224378

Centisome position: 63.0

GC content: 33.14

Gene sequence:

>525_bases
GTGGATAACGGTATATTTATAGTGGCTACTATTTTTATTGTAAATATTTTGTATGTGACGATTTATACGGTGAGGTTACT
TTTAACGATGAAAGGTTATCGTTACTTAGCTGCACTTTCAAGTGTGTTTGAAATGATTATCTATGTAGTTGCTCTTAGTT
TGGTTTTGGATAACTTAAATAATATTGCCAATGTTTTAGCATATGCTATTGGATTTGGTGTAGGAATTATTGTTGGTATG
AAAATTGAAGAGCGAATTGCTTTAGGCTATATTACAGTGAATGTTATTACCAAAGAATATAACTTAGACTTACCAAATCA
AATTCGAGATCTAGGTTATGGGGTTACTAGTTGGCTTGCGAGTGGACGTGATGGTGAACGGATGATGCTTGAAATTTTGA
CTCAAAGAAAGAATGAGCGGAAATTATATAAACACATTATTGAAATTGATAATGGGGCATTTATTGTTTCCTCTGAGCCA
AAACAAATTCACGGTGGTTTTTGGGTTAAACAAGTTCGGAAATGA

Upstream 100 bases:

>100_bases
CTTTTTTTGTTGAAGTGTTTCTTTTGTCAGCTATCTTAATGGATGTTATATTAGTAAAAGACTCAGTGGAATGTAGTTTT
TAGGTGGAGGGGTTATTTTA

Downstream 100 bases:

>100_bases
AGAGGAGCTTACCTTTGATGGTAGCTTCTTTTTTTATTTATTTAGTGAAATTAGATACATAATGCTAGTAAAAAGAGCAA
ATACGACCTAAACACGAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MDNGIFIVATIFIVNILYVTIYTVRLLLTMKGYRYLAALSSVFEMIIYVVALSLVLDNLNNIANVLAYAIGFGVGIIVGM
KIEERIALGYITVNVITKEYNLDLPNQIRDLGYGVTSWLASGRDGERMMLEILTQRKNERKLYKHIIEIDNGAFIVSSEP
KQIHGGFWVKQVRK

Sequences:

>Translated_174_residues
MDNGIFIVATIFIVNILYVTIYTVRLLLTMKGYRYLAALSSVFEMIIYVVALSLVLDNLNNIANVLAYAIGFGVGIIVGM
KIEERIALGYITVNVITKEYNLDLPNQIRDLGYGVTSWLASGRDGERMMLEILTQRKNERKLYKHIIEIDNGAFIVSSEP
KQIHGGFWVKQVRK
>Mature_174_residues
MDNGIFIVATIFIVNILYVTIYTVRLLLTMKGYRYLAALSSVFEMIIYVVALSLVLDNLNNIANVLAYAIGFGVGIIVGM
KIEERIALGYITVNVITKEYNLDLPNQIRDLGYGVTSWLASGRDGERMMLEILTQRKNERKLYKHIIEIDNGAFIVSSEP
KQIHGGFWVKQVRK

Specific function: Unknown

COG id: COG4843

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0316 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019264
- InterPro:   IPR022930 [H]

Pfam domain/function: PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 19707; Mature: 19707

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNGIFIVATIFIVNILYVTIYTVRLLLTMKGYRYLAALSSVFEMIIYVVALSLVLDNLN
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIANVLAYAIGFGVGIIVGMKIEERIALGYITVNVITKEYNLDLPNQIRDLGYGVTSWLA
HHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEEEEEEECCCCCHHHHHHHCCHHHHHHH
SGRDGERMMLEILTQRKNERKLYKHIIEIDNGAFIVSSEPKQIHGGFWVKQVRK
CCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCHHHCCHHHHHHCC
>Mature Secondary Structure
MDNGIFIVATIFIVNILYVTIYTVRLLLTMKGYRYLAALSSVFEMIIYVVALSLVLDNLN
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIANVLAYAIGFGVGIIVGMKIEERIALGYITVNVITKEYNLDLPNQIRDLGYGVTSWLA
HHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEEEEEEECCCCCHHHHHHHCCHHHHHHH
SGRDGERMMLEILTQRKNERKLYKHIIEIDNGAFIVSSEPKQIHGGFWVKQVRK
CCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]