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The map label for this gene is 226223646

Identifier: 226223646

GI number: 226223646

Start: 1058117

End: 1058326

Strand: Reverse

Name: 226223646

Synonym: Lm4b_01048

Alternate gene names: NA

Gene position: 1058326-1058117 (Counterclockwise)

Preceding gene: 226223648

Following gene: 226223645

Centisome position: 36.34

GC content: 36.67

Gene sequence:

>210_bases
ATGATTTTTAAAGTATTTTATCAAGAAACACTGACAGAAACACCCGTACGCGAAAAAACACAATCTTTATACGTAGAAGC
GGAAAGCGAAGTAAAAGTACGCCAACTTTTAAAAGATGAACCTTTCCACATCGAATTTGTCGAAAAAATTAGTGACGCGC
ACTTAGCTTATGAAAAGGAAAACCCAGACTTCGCGCTCTGGGAAAAATAA

Upstream 100 bases:

>100_bases
CACAACTGAAAGCAAGCCAATTATTACTGAATAATTATTAGGTTTTCGACCAGAGAATCTATTTTTAAAAACTAAACTTA
AAATTTAAGGAGAGAAAAAC

Downstream 100 bases:

>100_bases
GCCTATATGAAATTTGTTAAAAATAATGAGACAGCTGTTTTCGCCCTTGGTGGACTAGGCGAAATCGGTAAAAACACATA
TGGCGTACAATTTCAAGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 69

Protein sequence:

>69_residues
MIFKVFYQETLTETPVREKTQSLYVEAESEVKVRQLLKDEPFHIEFVEKISDAHLAYEKENPDFALWEK

Sequences:

>Translated_69_residues
MIFKVFYQETLTETPVREKTQSLYVEAESEVKVRQLLKDEPFHIEFVEKISDAHLAYEKENPDFALWEK
>Mature_69_residues
MIFKVFYQETLTETPVREKTQSLYVEAESEVKVRQLLKDEPFHIEFVEKISDAHLAYEKENPDFALWEK

Specific function: Unknown

COG id: COG5503

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0356 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009907
- ProDom:   PD055417 [H]

Pfam domain/function: PF07288 DUF1447 [H]

EC number: NA

Molecular weight: Translated: 8292; Mature: 8292

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFKVFYQETLTETPVREKTQSLYVEAESEVKVRQLLKDEPFHIEFVEKISDAHLAYEKE
CEEEHEEHHHHCCCCCHHHHHHEEECCCCHHHHHHHHCCCCCEEHHHHHHHHHHEEEECC
NPDFALWEK
CCCEECCCC
>Mature Secondary Structure
MIFKVFYQETLTETPVREKTQSLYVEAESEVKVRQLLKDEPFHIEFVEKISDAHLAYEKE
CEEEHEEHHHHCCCCCHHHHHHEEECCCCHHHHHHHHCCCCCEEHHHHHHHHHHEEEECC
NPDFALWEK
CCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA