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The map label for this gene is yhbA [H]

Identifier: 226223553

GI number: 226223553

Start: 973089

End: 974228

Strand: Direct

Name: yhbA [H]

Synonym: Lm4b_00954

Alternate gene names: 226223553

Gene position: 973089-974228 (Clockwise)

Preceding gene: 226223550

Following gene: 226223554

Centisome position: 33.41

GC content: 41.84

Gene sequence:

>1140_bases
ATGATAGTGAAGTCGACATCAGATTACGCCGCATTGAAAGAAGAACTCATTGCTTATGCGCATGAAATAGGTATTCAAAA
AATTGGTTTCACAACAGCAGACCCTTTTTTATTTTTAAAAGAACGATTACTAGAAGCGGAAGCGCTGGACCTTTTTACAG
GATTTGAACATCCGGTAATTGATGAACGGGTTTATCCAGAGCTTATTTTCAAGGAACCGCAGTCGATTATCGCCATTGCA
CTTGCTTATCCGTCTAAATTAAAAGAAGCACCTATAAGTAAAAAAGGAGCTAGACGAGGTGTATTTGCCAGAGCTTCTTG
GGGAATTGATTATCATACCGTTTTACGAGAAAAATTAGCGCTACTCGAAACTTTTTTAAGTGAACGTTTGCCAGATGTAC
GAATGAAATCAATGGTGGATACTGGGGAATTATCAGATGTAGCTGTAGCAGAACGAGCGGGCATTGGCTGGCGCGGGAAA
AACACGCTGCTCATAACGCCAGAATACGGCTCGTGGGTCTATTTAGGCGAAATGATAACCAATATACCATTCGAACCAGA
TACGCCGGCTAGCGACTTGTGTGGTAGTTGCAATCAATGTGTGAAAGCCTGCCCGACAGGTTCCTTACTGGGTGAAGGGA
AGATGAATCCGAAAATATGTTTAAGTTATTTGACACAAACAAAAGACTTTCTAGATGAAAAATATCGCGAAGTGTTGCAT
AATCGTTTGTATGGTTGTGATACTTGTCAGGTAGTTTGTCCGTATAATCGTGGGCATGATTTCCACTTTCATGATGAGAT
GGAGCCGGATCCAGAGCTTGTTCGACCAGAATTAAAACCACTATTACACATTTCCAATCGCGCTTTTAAAGAACAATTTG
GCGATATGGCGGGTTCGTGGCGTGGGAAGAAGCCCATTCAGCGAAATGCCATCATTATTCTAGCGCGGTATAAAGATAAA
ACAGCTGTACCAGACTTAATTGACTGTTTACAAAACGATCCAAGACCAGTCATTCGAGGAACGGCTGGCTGGGCGCTAAG
AAAAATCGGTGGAAGCGATGCCGAAAAAGCTGTCGAGCAAGCACTTCAAACCGAACAAGATGAACAAGTATTACAAGAAT
TAACAGCCATAACAAATTAA

Upstream 100 bases:

>100_bases
TATATTTTTTTATAAATCCTGTTATCAACGCAGTGTTTCGACCTTTTTAAGCGAAGCATTGCGTTTATTTTATTGCCTGA
AAATAAGGAGAGAGGGGATG

Downstream 100 bases:

>100_bases
TAGAAACCAGGTGAAAAGCAATGCCAAACCATATCGTACTATATCAACCAGAAATCCCAGCGAATACCGGAAATATCTCC
AGAACATGTGCCGGGACGGA

Product: YhbA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MIVKSTSDYAALKEELIAYAHEIGIQKIGFTTADPFLFLKERLLEAEALDLFTGFEHPVIDERVYPELIFKEPQSIIAIA
LAYPSKLKEAPISKKGARRGVFARASWGIDYHTVLREKLALLETFLSERLPDVRMKSMVDTGELSDVAVAERAGIGWRGK
NTLLITPEYGSWVYLGEMITNIPFEPDTPASDLCGSCNQCVKACPTGSLLGEGKMNPKICLSYLTQTKDFLDEKYREVLH
NRLYGCDTCQVVCPYNRGHDFHFHDEMEPDPELVRPELKPLLHISNRAFKEQFGDMAGSWRGKKPIQRNAIIILARYKDK
TAVPDLIDCLQNDPRPVIRGTAGWALRKIGGSDAEKAVEQALQTEQDEQVLQELTAITN

Sequences:

>Translated_379_residues
MIVKSTSDYAALKEELIAYAHEIGIQKIGFTTADPFLFLKERLLEAEALDLFTGFEHPVIDERVYPELIFKEPQSIIAIA
LAYPSKLKEAPISKKGARRGVFARASWGIDYHTVLREKLALLETFLSERLPDVRMKSMVDTGELSDVAVAERAGIGWRGK
NTLLITPEYGSWVYLGEMITNIPFEPDTPASDLCGSCNQCVKACPTGSLLGEGKMNPKICLSYLTQTKDFLDEKYREVLH
NRLYGCDTCQVVCPYNRGHDFHFHDEMEPDPELVRPELKPLLHISNRAFKEQFGDMAGSWRGKKPIQRNAIIILARYKDK
TAVPDLIDCLQNDPRPVIRGTAGWALRKIGGSDAEKAVEQALQTEQDEQVLQELTAITN
>Mature_379_residues
MIVKSTSDYAALKEELIAYAHEIGIQKIGFTTADPFLFLKERLLEAEALDLFTGFEHPVIDERVYPELIFKEPQSIIAIA
LAYPSKLKEAPISKKGARRGVFARASWGIDYHTVLREKLALLETFLSERLPDVRMKSMVDTGELSDVAVAERAGIGWRGK
NTLLITPEYGSWVYLGEMITNIPFEPDTPASDLCGSCNQCVKACPTGSLLGEGKMNPKICLSYLTQTKDFLDEKYREVLH
NRLYGCDTCQVVCPYNRGHDFHFHDEMEPDPELVRPELKPLLHISNRAFKEQFGDMAGSWRGKKPIQRNAIIILARYKDK
TAVPDLIDCLQNDPRPVIRGTAGWALRKIGGSDAEKAVEQALQTEQDEQVLQELTAITN

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=288, Percent_Identity=29.5138888888889, Blast_Score=150, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 42602; Mature: 42602

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVKSTSDYAALKEELIAYAHEIGIQKIGFTTADPFLFLKERLLEAEALDLFTGFEHPVI
CCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
DERVYPELIFKEPQSIIAIALAYPSKLKEAPISKKGARRGVFARASWGIDYHTVLREKLA
CHHHHHHHHHHCCHHHEEEHHHCCHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHH
LLETFLSERLPDVRMKSMVDTGELSDVAVAERAGIGWRGKNTLLITPEYGSWVYLGEMIT
HHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCEEEHHHHHH
NIPFEPDTPASDLCGSCNQCVKACPTGSLLGEGKMNPKICLSYLTQTKDFLDEKYREVLH
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NRLYGCDTCQVVCPYNRGHDFHFHDEMEPDPELVRPELKPLLHISNRAFKEQFGDMAGSW
HHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC
RGKKPIQRNAIIILARYKDKTAVPDLIDCLQNDPRPVIRGTAGWALRKIGGSDAEKAVEQ
CCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCEEECCCCHHHHHCCCCHHHHHHHH
ALQTEQDEQVLQELTAITN
HHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVKSTSDYAALKEELIAYAHEIGIQKIGFTTADPFLFLKERLLEAEALDLFTGFEHPVI
CCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
DERVYPELIFKEPQSIIAIALAYPSKLKEAPISKKGARRGVFARASWGIDYHTVLREKLA
CHHHHHHHHHHCCHHHEEEHHHCCHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHH
LLETFLSERLPDVRMKSMVDTGELSDVAVAERAGIGWRGKNTLLITPEYGSWVYLGEMIT
HHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCEEEHHHHHH
NIPFEPDTPASDLCGSCNQCVKACPTGSLLGEGKMNPKICLSYLTQTKDFLDEKYREVLH
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NRLYGCDTCQVVCPYNRGHDFHFHDEMEPDPELVRPELKPLLHISNRAFKEQFGDMAGSW
HHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC
RGKKPIQRNAIIILARYKDKTAVPDLIDCLQNDPRPVIRGTAGWALRKIGGSDAEKAVEQ
CCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCEEECCCCHHHHHCCCCHHHHHHHH
ALQTEQDEQVLQELTAITN
HHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]