Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is 226223409
Identifier: 226223409
GI number: 226223409
Start: 821177
End: 821827
Strand: Direct
Name: 226223409
Synonym: Lm4b_00807
Alternate gene names: NA
Gene position: 821177-821827 (Clockwise)
Preceding gene: 226223406
Following gene: 226223410
Centisome position: 28.19
GC content: 34.56
Gene sequence:
>651_bases ATGAAAAAAGGGTTATTTAGTATGGTTCTTGTGCTAGCAATGGTACTTGTATTAAGTGCATGTGGCGCATCAAGGGTAGA ACCAAAAAAAGCAGGAGAAATCACAGTTAATGCCGTAGTTTACAACAAAGATACGGATAAAGTAAAAGATGTATATGGTG AAGATGGTTCTAAATTCGAAAAAGAATTTGAAACTAGTTTTAAAGAAAGCTTTATCAGTACATTTACAGCAAGCTTTTCT AGTGATGTAAACTTAGACAAACAAGTGGATGAGTTTTATGATGCACTTCGCAAACAAGTAAACGAAAAAACTTCGTATAC TACTAAAGTAACAAATGACGACAAAGAAAGTCCAGAAATTCAATTCGCTGTTAAAGGGCTTGATATGAAAGGCGTTCAAA CAGAATTAGTTGAAGAATTAACAAAAGCAGCAACAGCTGATCCATCTCTTGCAACAGATGATCAAAAAATGGCTGAAAAA ACAATGGAAATCTATACGAAAGCTGTTCAAAATGCAGATGCAGTATCTGAGGCTAAAACAGTTACACTTAAATTAAAAGC AGATCCAGATGACGATTCTTTGTGGAAAATGGAAAATGACATGGCATTCATGCAAGAATTAACAACAGCATTCTTTATGG GCGGCATGTAA
Upstream 100 bases:
>100_bases AAATATGTATAATTTATGACACTTTTTGTGAAATAGTTGGCTTTTCCCTTTTCATTCTGTACAATGAAGTGGAATTCAAA TAAGAAAGGGAGATTTACTA
Downstream 100 bases:
>100_bases GTTTTTATATGGCAAAACACCAATAACTTTCGGGTTGTTGGTGTTTTTTTGTTTCCAAGAATAAATGTTATAATAACATG AAGATTTACTAATGGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKKGLFSMVLVLAMVLVLSACGASRVEPKKAGEITVNAVVYNKDTDKVKDVYGEDGSKFEKEFETSFKESFISTFTASFS SDVNLDKQVDEFYDALRKQVNEKTSYTTKVTNDDKESPEIQFAVKGLDMKGVQTELVEELTKAATADPSLATDDQKMAEK TMEIYTKAVQNADAVSEAKTVTLKLKADPDDDSLWKMENDMAFMQELTTAFFMGGM
Sequences:
>Translated_216_residues MKKGLFSMVLVLAMVLVLSACGASRVEPKKAGEITVNAVVYNKDTDKVKDVYGEDGSKFEKEFETSFKESFISTFTASFS SDVNLDKQVDEFYDALRKQVNEKTSYTTKVTNDDKESPEIQFAVKGLDMKGVQTELVEELTKAATADPSLATDDQKMAEK TMEIYTKAVQNADAVSEAKTVTLKLKADPDDDSLWKMENDMAFMQELTTAFFMGGM >Mature_216_residues MKKGLFSMVLVLAMVLVLSACGASRVEPKKAGEITVNAVVYNKDTDKVKDVYGEDGSKFEKEFETSFKESFISTFTASFS SDVNLDKQVDEFYDALRKQVNEKTSYTTKVTNDDKESPEIQFAVKGLDMKGVQTELVEELTKAATADPSLATDDQKMAEK TMEIYTKAVQNADAVSEAKTVTLKLKADPDDDSLWKMENDMAFMQELTTAFFMGGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23983; Mature: 23983
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGLFSMVLVLAMVLVLSACGASRVEPKKAGEITVNAVVYNKDTDKVKDVYGEDGSKFE CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCHHHH KEFETSFKESFISTFTASFSSDVNLDKQVDEFYDALRKQVNEKTSYTTKVTNDDKESPEI HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCE QFAVKGLDMKGVQTELVEELTKAATADPSLATDDQKMAEKTMEIYTKAVQNADAVSEAKT EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHCEE VTLKLKADPDDDSLWKMENDMAFMQELTTAFFMGGM EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKGLFSMVLVLAMVLVLSACGASRVEPKKAGEITVNAVVYNKDTDKVKDVYGEDGSKFE CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCHHHH KEFETSFKESFISTFTASFSSDVNLDKQVDEFYDALRKQVNEKTSYTTKVTNDDKESPEI HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCE QFAVKGLDMKGVQTELVEELTKAATADPSLATDDQKMAEKTMEIYTKAVQNADAVSEAKT EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHCEE VTLKLKADPDDDSLWKMENDMAFMQELTTAFFMGGM EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA