Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

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The map label for this gene is inlJ [H]

Identifier: 226223406

GI number: 226223406

Start: 817405

End: 819585

Strand: Direct

Name: inlJ [H]

Synonym: Lm4b_00804

Alternate gene names: 226223406

Gene position: 817405-819585 (Clockwise)

Preceding gene: 226223405

Following gene: 226223409

Centisome position: 28.06

GC content: 35.08

Gene sequence:

>2181_bases
TTGAAAAAATTTGTTTTAATTTTTATTTGTTTTCTCACGCTAACAACCATTGTCCCTTGGAATACGCTCGAAACGAAGGC
GGCATCCACTTCTTGGCTTGAACAAGAATTAGATGGTAATGAAGCCTTTATCACTGAAACAGAAAGAGTCTTGTCAAAAA
ATCGTGAAGATATTACACTCGCAGATTTAGAAACAATACAAGAATTAGATATTTATGGTGATGCTTCATCAATACCCGAC
AAAATTTCTGATTATAAGAATCTCAATACTTTACTTGCCCTTAATGGAACGATTTCAGAAATTCCAACTAGTATCACTAA
ACTAACAAAACTAACAAGAATCAACGTAGACAATAATAATTTTCAAGAATTTCCGATGATTCTATTACAGATGCCTTCTC
TAAGTTCTATTGAGATAAATAGAAATAAAATTAAAGAGATTCCTTCAGAAATAACCACATTATCCCCTCATTTAGGATCG
CTGGATGTACGCTATAATGAGCTAATTACGCTTCCGGATAATATCTTCACTACTGAGTGGGAAAGTAAGCTCTCATTACT
AACTACAGGAAATCAATTAGTTTCTGACATTCCTGCTGATTGGTTAGATAATTTTAATCAAGCAGATAACATGCTCGAAT
TTTACAACAATCCACCAAATGATTATCATCAAAAACAAGACCAGCTAACGTATAGTGGAGCAAGAATTGAAGTCCCATTA
AATACAGATCTAAAAACATTAACTCCTGATAAAACAAAACTGGGCTTAAAATCAGGCAGAACGTTATTTGAACAACATGA
ATTTATGTATTATGATGACGGGACCTCTAATAACATTCTAACTAACGGTGTTGCTACTGCCACAGGAAATGGCTATATAA
CAATCAAAAGTACTTTATCAACCAATTCCAACCCTTTTGCAAAAGTACGAGTTCCTATCACAGTAACGCCCCCAGTAAAA
GGAGGAGATGTTACCGTTCAATATAAAGACACAACTGGAGTAGTGTTAGCAGACTCCATTACTTTATCCGGAAATGTGGG
CGAAAATTATACGACAACAGCTAAAACAATTGACGGCTATTCTTTAACAACTACACCAACCAATGCTAATGGAACTTTTT
CAACAAACCCACAAACTGTCACATATACTTATAAAAAAGACCCTATAGCGCAACCAGTTACTGTTAATTATATTGATACA
GATGGAAAAACAATTGCTCCCACTGAAACATTAAGCGGAAATGTGGGCGAAAATTATACGACAACTGCTAAAACAATTGA
CGGCTATTCTTTAACAACTACACCTGCCAATGCTAATGGAACTTTTTCAACAAACCCACAAACTGTCACATATACTTACA
CAAAAGATCCTATAGCGCAACCAGTTACTGTTAATTATATCGATACAGATGGAAAAACAATTGCTCCTTCTGAAACCTTA
ACCGGAAATATTAGTGAAAACTATACGACAACAGCTAAAACAATTGACGGCTATTCTTTAACAACTACACCTGCCAATGC
CAAGGGGACTTTTTCGACAGAACCTCAAATAATTAATTATATCTATGCGAAAAACGCTGAGACAGCCCAACCTATTACCG
TTAATTATAGAAACTCTACAGGTCAAAAAATCGCGAAAAGTGAGGTTTTAACTGGTAATATCGGAGAATCTTACTCAACT
CAACCGAAAACAATTGCTGGTTACACACTCACAACAATACCTCCAAATGCAAAAGGAACCTTTACAACAAATGCGCAAAC
AGTAACTTATATGTATACGCCGATTGCTATTTCCGCCTTACCAGTGACAGTGAACTATTTAGATGAAAATGGTAAAGAAA
TTGCTGACTCTGTAGTTCTAAATGGTCGTGTGGGAGAGGCTTATAATACACTAGCTAAAGAAATAGATGGCTACACGTTG
ATAAAAACTCCTACAAATTCTAATGGTGTGTTTTCGGCGGAAGCACAATCAATCGATTATATCTACCGTAAAAATAAACC
AGTAGTAATAGTAAATCCACCAATCAAAAACCCGATTATTAAAATAGATTCTAGTACCAACGTAATAAAAGAAGAAACGT
CTGTCTTACCAAAAACTGGCGATTCCAATCCATACAATGACTTTTTGGCAGGAATTCTACTATTATCTTCAGCGATGTTT
CTTTGGAAAAATCATAAATAA

Upstream 100 bases:

>100_bases
ATAATAGTATTTTTGTTAATACATTGGCTTGTTGTTTTGTATATTATAATTATTCTAAATCAAGTTGCTAAAATACAAGA
TACAAGGAGTGCTATATTTT

Downstream 100 bases:

>100_bases
AAACCGAAAAGACACCTTTCTTTTCGGCTGAGATTGTAGGCGAAGTATAAAAATACTTTGCCTACAGTTTTTTTATTATA
ATGAAATGAAGTGAAGTGGA

Product: cell surface protein (LPXTG motif)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 726; Mature: 726

Protein sequence:

>726_residues
MKKFVLIFICFLTLTTIVPWNTLETKAASTSWLEQELDGNEAFITETERVLSKNREDITLADLETIQELDIYGDASSIPD
KISDYKNLNTLLALNGTISEIPTSITKLTKLTRINVDNNNFQEFPMILLQMPSLSSIEINRNKIKEIPSEITTLSPHLGS
LDVRYNELITLPDNIFTTEWESKLSLLTTGNQLVSDIPADWLDNFNQADNMLEFYNNPPNDYHQKQDQLTYSGARIEVPL
NTDLKTLTPDKTKLGLKSGRTLFEQHEFMYYDDGTSNNILTNGVATATGNGYITIKSTLSTNSNPFAKVRVPITVTPPVK
GGDVTVQYKDTTGVVLADSITLSGNVGENYTTTAKTIDGYSLTTTPTNANGTFSTNPQTVTYTYKKDPIAQPVTVNYIDT
DGKTIAPTETLSGNVGENYTTTAKTIDGYSLTTTPANANGTFSTNPQTVTYTYTKDPIAQPVTVNYIDTDGKTIAPSETL
TGNISENYTTTAKTIDGYSLTTTPANAKGTFSTEPQIINYIYAKNAETAQPITVNYRNSTGQKIAKSEVLTGNIGESYST
QPKTIAGYTLTTIPPNAKGTFTTNAQTVTYMYTPIAISALPVTVNYLDENGKEIADSVVLNGRVGEAYNTLAKEIDGYTL
IKTPTNSNGVFSAEAQSIDYIYRKNKPVVIVNPPIKNPIIKIDSSTNVIKEETSVLPKTGDSNPYNDFLAGILLLSSAMF
LWKNHK

Sequences:

>Translated_726_residues
MKKFVLIFICFLTLTTIVPWNTLETKAASTSWLEQELDGNEAFITETERVLSKNREDITLADLETIQELDIYGDASSIPD
KISDYKNLNTLLALNGTISEIPTSITKLTKLTRINVDNNNFQEFPMILLQMPSLSSIEINRNKIKEIPSEITTLSPHLGS
LDVRYNELITLPDNIFTTEWESKLSLLTTGNQLVSDIPADWLDNFNQADNMLEFYNNPPNDYHQKQDQLTYSGARIEVPL
NTDLKTLTPDKTKLGLKSGRTLFEQHEFMYYDDGTSNNILTNGVATATGNGYITIKSTLSTNSNPFAKVRVPITVTPPVK
GGDVTVQYKDTTGVVLADSITLSGNVGENYTTTAKTIDGYSLTTTPTNANGTFSTNPQTVTYTYKKDPIAQPVTVNYIDT
DGKTIAPTETLSGNVGENYTTTAKTIDGYSLTTTPANANGTFSTNPQTVTYTYTKDPIAQPVTVNYIDTDGKTIAPSETL
TGNISENYTTTAKTIDGYSLTTTPANAKGTFSTEPQIINYIYAKNAETAQPITVNYRNSTGQKIAKSEVLTGNIGESYST
QPKTIAGYTLTTIPPNAKGTFTTNAQTVTYMYTPIAISALPVTVNYLDENGKEIADSVVLNGRVGEAYNTLAKEIDGYTL
IKTPTNSNGVFSAEAQSIDYIYRKNKPVVIVNPPIKNPIIKIDSSTNVIKEETSVLPKTGDSNPYNDFLAGILLLSSAMF
LWKNHK
>Mature_726_residues
MKKFVLIFICFLTLTTIVPWNTLETKAASTSWLEQELDGNEAFITETERVLSKNREDITLADLETIQELDIYGDASSIPD
KISDYKNLNTLLALNGTISEIPTSITKLTKLTRINVDNNNFQEFPMILLQMPSLSSIEINRNKIKEIPSEITTLSPHLGS
LDVRYNELITLPDNIFTTEWESKLSLLTTGNQLVSDIPADWLDNFNQADNMLEFYNNPPNDYHQKQDQLTYSGARIEVPL
NTDLKTLTPDKTKLGLKSGRTLFEQHEFMYYDDGTSNNILTNGVATATGNGYITIKSTLSTNSNPFAKVRVPITVTPPVK
GGDVTVQYKDTTGVVLADSITLSGNVGENYTTTAKTIDGYSLTTTPTNANGTFSTNPQTVTYTYKKDPIAQPVTVNYIDT
DGKTIAPTETLSGNVGENYTTTAKTIDGYSLTTTPANANGTFSTNPQTVTYTYTKDPIAQPVTVNYIDTDGKTIAPSETL
TGNISENYTTTAKTIDGYSLTTTPANAKGTFSTEPQIINYIYAKNAETAQPITVNYRNSTGQKIAKSEVLTGNIGESYST
QPKTIAGYTLTTIPPNAKGTFTTNAQTVTYMYTPIAISALPVTVNYLDENGKEIADSVVLNGRVGEAYNTLAKEIDGYTL
IKTPTNSNGVFSAEAQSIDYIYRKNKPVVIVNPPIKNPIIKIDSSTNVIKEETSVLPKTGDSNPYNDFLAGILLLSSAMF
LWKNHK

Specific function: Involved in several steps of L.monocytogenes infection [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 MucBP domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009459
- InterPro:   IPR019931
- InterPro:   IPR001899 [H]

Pfam domain/function: PF06458 MucBP [H]

EC number: NA

Molecular weight: Translated: 79555; Mature: 79555

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFVLIFICFLTLTTIVPWNTLETKAASTSWLEQELDGNEAFITETERVLSKNREDITL
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEEHHHHHHHCCCCCEEE
ADLETIQELDIYGDASSIPDKISDYKNLNTLLALNGTISEIPTSITKLTKLTRINVDNNN
HHHHHHHHHEECCCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHEEEEEEECCCCC
FQEFPMILLQMPSLSSIEINRNKIKEIPSEITTLSPHLGSLDVRYNELITLPDNIFTTEW
HHHHCEEEEECCCCCEEEECHHHHHHHHHHHHCCCCCCCCEEEEECEEEECCCCEEECCC
ESKLSLLTTGNQLVSDIPADWLDNFNQADNMLEFYNNPPNDYHQKQDQLTYSGARIEVPL
CCCEEEEECCCHHHHHCCHHHHHCHHHHHHHHHHHCCCCHHHHHHHHCEEECCCEEEEEC
NTDLKTLTPDKTKLGLKSGRTLFEQHEFMYYDDGTSNNILTNGVATATGNGYITIKSTLS
CCCCCCCCCCHHHCCHHCCCHHHHCCCEEEEECCCCCCEEECCEEEECCCEEEEEEEEEC
TNSNPFAKVRVPITVTPPVKGGDVTVQYKDTTGVVLADSITLSGNVGENYTTTAKTIDGY
CCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCEEEEEEEECCE
SLTTTPTNANGTFSTNPQTVTYTYKKDPIAQPVTVNYIDTDGKTIAPTETLSGNVGENYT
EEEECCCCCCCEECCCCCEEEEEECCCCCCCCEEEEEEECCCCEECCCHHCCCCCCCCEE
TTAKTIDGYSLTTTPANANGTFSTNPQTVTYTYTKDPIAQPVTVNYIDTDGKTIAPSETL
EEEEEECCEEEEECCCCCCCEECCCCCEEEEEECCCCCCCCEEEEEEECCCCEECCCCCE
TGNISENYTTTAKTIDGYSLTTTPANAKGTFSTEPQIINYIYAKNAETAQPITVNYRNST
ECCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCC
GQKIAKSEVLTGNIGESYSTQPKTIAGYTLTTIPPNAKGTFTTNAQTVTYMYTPIAISAL
CCHHHHCCEEECCCCCCCCCCCCEEECEEEEECCCCCCCEEECCCEEEEEEECCEEEEEE
PVTVNYLDENGKEIADSVVLNGRVGEAYNTLAKEIDGYTLIKTPTNSNGVFSAEAQSIDY
EEEEEEECCCCHHHHHHEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCEEE
IYRKNKPVVIVNPPIKNPIIKIDSSTNVIKEETSVLPKTGDSNPYNDFLAGILLLSSAMF
EEECCCCEEEECCCCCCCEEEECCCCCEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
LWKNHK
EEECCC
>Mature Secondary Structure
MKKFVLIFICFLTLTTIVPWNTLETKAASTSWLEQELDGNEAFITETERVLSKNREDITL
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEEHHHHHHHCCCCCEEE
ADLETIQELDIYGDASSIPDKISDYKNLNTLLALNGTISEIPTSITKLTKLTRINVDNNN
HHHHHHHHHEECCCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHEEEEEEECCCCC
FQEFPMILLQMPSLSSIEINRNKIKEIPSEITTLSPHLGSLDVRYNELITLPDNIFTTEW
HHHHCEEEEECCCCCEEEECHHHHHHHHHHHHCCCCCCCCEEEEECEEEECCCCEEECCC
ESKLSLLTTGNQLVSDIPADWLDNFNQADNMLEFYNNPPNDYHQKQDQLTYSGARIEVPL
CCCEEEEECCCHHHHHCCHHHHHCHHHHHHHHHHHCCCCHHHHHHHHCEEECCCEEEEEC
NTDLKTLTPDKTKLGLKSGRTLFEQHEFMYYDDGTSNNILTNGVATATGNGYITIKSTLS
CCCCCCCCCCHHHCCHHCCCHHHHCCCEEEEECCCCCCEEECCEEEECCCEEEEEEEEEC
TNSNPFAKVRVPITVTPPVKGGDVTVQYKDTTGVVLADSITLSGNVGENYTTTAKTIDGY
CCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCEEEEEEEECCE
SLTTTPTNANGTFSTNPQTVTYTYKKDPIAQPVTVNYIDTDGKTIAPTETLSGNVGENYT
EEEECCCCCCCEECCCCCEEEEEECCCCCCCCEEEEEEECCCCEECCCHHCCCCCCCCEE
TTAKTIDGYSLTTTPANANGTFSTNPQTVTYTYTKDPIAQPVTVNYIDTDGKTIAPSETL
EEEEEECCEEEEECCCCCCCEECCCCCEEEEEECCCCCCCCEEEEEEECCCCEECCCCCE
TGNISENYTTTAKTIDGYSLTTTPANAKGTFSTEPQIINYIYAKNAETAQPITVNYRNST
ECCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCC
GQKIAKSEVLTGNIGESYSTQPKTIAGYTLTTIPPNAKGTFTTNAQTVTYMYTPIAISAL
CCHHHHCCEEECCCCCCCCCCCCEEECEEEEECCCCCCCEEECCCEEEEEEECCEEEEEE
PVTVNYLDENGKEIADSVVLNGRVGEAYNTLAKEIDGYTLIKTPTNSNGVFSAEAQSIDY
EEEEEEECCCCHHHHHHEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCEEE
IYRKNKPVVIVNPPIKNPIIKIDSSTNVIKEETSVLPKTGDSNPYNDFLAGILLLSSAMF
EEECCCCEEEECCCCCCCEEEECCCCCEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
LWKNHK
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA