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The map label for this gene is yafV [C]

Identifier: 226223410

GI number: 226223410

Start: 821933

End: 822823

Strand: Direct

Name: yafV [C]

Synonym: Lm4b_00808

Alternate gene names: 226223410

Gene position: 821933-822823 (Clockwise)

Preceding gene: 226223409

Following gene: 226223415

Centisome position: 28.22

GC content: 36.92

Gene sequence:

>891_bases
ATGACTACTATAAAAATCGCATTAATCCAACAAAAAGCAGTACCAAATAATAAGGAAGCCAATTTGAAATTAGCCATTAA
ATATATAAAAGAAGCGCATGAAAAAGGGGCAGATTTAGTACTTTTCCCTGAGATGTGGTCAAATGGTTATGCGCCCCCTT
TTGAAGATGCTTTTAATCATCCCCTAGCTACTGATTTTGATAATGAAAGAACCAAGTGGTTAAATGAAGCTATCACAGAA
GACAGTGCGTATGTTTTGACACTGAAAGAACTTGCCAAAGAGTTGAAGATTGGCATTTGCGCTACGTATTTGTCTAAAAC
GGAACAAAAACCACAAAATACTGCTATTATTATTGACCGAAAAGGAGAAATAATTTTAGACTATGCCAAAGTCCATACGT
GTGATTTTTCTTTAGAAATATTACTACAAAGTGGCGAGGAATTTAAAGTTTGTGAGTTTGATGGTATTAAGCTGGGGGTC
ATGATTTGCTATGATCGCGAGTTTCCAGAAAGCGCCAGAGTTCTCATGTTAAAAGGGGCAGAAATTATCCTCGTTCCAAA
TGCTTGTGATATAAATCCAGCCAGACTTAATCAACTAAATTCTCGTGCTTTTGAAAACATGGTTGGCGTAGCGATGGCAA
ACTATCCTGGCGAAAAATGGGGCAGATCCACTGCTTTTTCCCCGATTGTTTTTGATGAAAATGGGGATTACCGCGATAAT
ACGATTATTGAAACAGAGGACGTTTCAGAAGGTATTTTTATTGCTGAATTTAATTTAGACGAGATTCGAACTTACCGGGA
AAATGAAACGTGGGGAAATGCCTACCGAAAACCGCAAACATATACAGATTTAATAAGTTTAGATGTAGAAGCGCCATTTA
AACGAAATTAA

Upstream 100 bases:

>100_bases
TATATGGCAAAACACCAATAACTTTCGGGTTGTTGGTGTTTTTTTGTTTCCAAGAATAAATGTTATAATAACATGAAGAT
TTACTAATGGGAGGCGCTAT

Downstream 100 bases:

>100_bases
AAAAACAGAGATGAGCGATTCTCTGTTTTTTCTTTTAAAAATAATAAAGCCCGGTAATAATCAGCGCAACGACTAAAATC
CCCGGAACAAGATTCGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTTIKIALIQQKAVPNNKEANLKLAIKYIKEAHEKGADLVLFPEMWSNGYAPPFEDAFNHPLATDFDNERTKWLNEAITE
DSAYVLTLKELAKELKIGICATYLSKTEQKPQNTAIIIDRKGEIILDYAKVHTCDFSLEILLQSGEEFKVCEFDGIKLGV
MICYDREFPESARVLMLKGAEIILVPNACDINPARLNQLNSRAFENMVGVAMANYPGEKWGRSTAFSPIVFDENGDYRDN
TIIETEDVSEGIFIAEFNLDEIRTYRENETWGNAYRKPQTYTDLISLDVEAPFKRN

Sequences:

>Translated_296_residues
MTTIKIALIQQKAVPNNKEANLKLAIKYIKEAHEKGADLVLFPEMWSNGYAPPFEDAFNHPLATDFDNERTKWLNEAITE
DSAYVLTLKELAKELKIGICATYLSKTEQKPQNTAIIIDRKGEIILDYAKVHTCDFSLEILLQSGEEFKVCEFDGIKLGV
MICYDREFPESARVLMLKGAEIILVPNACDINPARLNQLNSRAFENMVGVAMANYPGEKWGRSTAFSPIVFDENGDYRDN
TIIETEDVSEGIFIAEFNLDEIRTYRENETWGNAYRKPQTYTDLISLDVEAPFKRN
>Mature_295_residues
TTIKIALIQQKAVPNNKEANLKLAIKYIKEAHEKGADLVLFPEMWSNGYAPPFEDAFNHPLATDFDNERTKWLNEAITED
SAYVLTLKELAKELKIGICATYLSKTEQKPQNTAIIIDRKGEIILDYAKVHTCDFSLEILLQSGEEFKVCEFDGIKLGVM
ICYDREFPESARVLMLKGAEIILVPNACDINPARLNQLNSRAFENMVGVAMANYPGEKWGRSTAFSPIVFDENGDYRDNT
IIETEDVSEGIFIAEFNLDEIRTYRENETWGNAYRKPQTYTDLISLDVEAPFKRN

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI9910460, Length=246, Percent_Identity=27.2357723577236, Blast_Score=79, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6323383, Length=281, Percent_Identity=29.1814946619217, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 33669; Mature: 33537

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIKIALIQQKAVPNNKEANLKLAIKYIKEAHEKGADLVLFPEMWSNGYAPPFEDAFNH
CCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCHHHHHCC
PLATDFDNERTKWLNEAITEDSAYVLTLKELAKELKIGICATYLSKTEQKPQNTAIIIDR
CCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
KGEIILDYAKVHTCDFSLEILLQSGEEFKVCEFDGIKLGVMICYDREFPESARVLMLKGA
CCCEEEEEEHEEECCCEEEEEEECCCCEEEEEECCEEEEEEEEECCCCCCCCCEEEEECC
EIILVPNACDINPARLNQLNSRAFENMVGVAMANYPGEKWGRSTAFSPIVFDENGDYRDN
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCHHCCCCCCCCCEEECCCCCCCCC
TIIETEDVSEGIFIAEFNLDEIRTYRENETWGNAYRKPQTYTDLISLDVEAPFKRN
EEEEECCCCCCEEEEECCHHHHHHHCCCCCCCHHHCCCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure 
TTIKIALIQQKAVPNNKEANLKLAIKYIKEAHEKGADLVLFPEMWSNGYAPPFEDAFNH
CEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCHHHHHCC
PLATDFDNERTKWLNEAITEDSAYVLTLKELAKELKIGICATYLSKTEQKPQNTAIIIDR
CCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
KGEIILDYAKVHTCDFSLEILLQSGEEFKVCEFDGIKLGVMICYDREFPESARVLMLKGA
CCCEEEEEEHEEECCCEEEEEEECCCCEEEEEECCEEEEEEEEECCCCCCCCCEEEEECC
EIILVPNACDINPARLNQLNSRAFENMVGVAMANYPGEKWGRSTAFSPIVFDENGDYRDN
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCHHCCCCCCCCCEEECCCCCCCCC
TIIETEDVSEGIFIAEFNLDEIRTYRENETWGNAYRKPQTYTDLISLDVEAPFKRN
EEEEECCCCCCEEEEECCHHHHHHHCCCCCCCHHHCCCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8526497 [H]