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The map label for this gene is 226223390

Identifier: 226223390

GI number: 226223390

Start: 797967

End: 798614

Strand: Direct

Name: 226223390

Synonym: Lm4b_00788

Alternate gene names: NA

Gene position: 797967-798614 (Clockwise)

Preceding gene: 226223389

Following gene: 226223392

Centisome position: 27.4

GC content: 33.8

Gene sequence:

>648_bases
ATGACAACCAAACGCAAAGAGACTAGAGAAAGTGTTTGTTATCGGGAAATCAAAAAGAAGATTAGAAACGGGGAACTAAA
GCCAGGCGATCGTTTAATTGAAAATACATTATCACAACAATTAGAAATTAGTCGTACGCCGATTCGAAAAGCAATCGGGA
TGCTTGCTGCAGATGGATATGTGGAATACAACGATTTTCGAGGTGCTTTTGTTCGGGACAGCATTATTAATAAAGAACGT
TACTTTGAAATGACAGAAATTATTGGTTTGTTTCTAAAACAAGCTATTCAAAAAATCCGTACAAAAAAAATAGCCTTCAA
TAAAATGCGAGTTGTTGCAAAATTAGTCGAAATTGAACGCGAACAACCAACCGACCCAGCAACTTATTTCGAATATGAAA
AATGGTTTGTGAGTGATTTACTAACCTATATGAAAAATAATTACTATTTGAAAATTAGCGATGATTTTTTTAATAATATT
CAAGAATTTGGTGATGAAGAAGTCATTAAGATTGCACAAAACGCTTGTGTTAAAACAATCGCTAACATCCAACGTTTTAT
TGATGCGTTGGATGTACAAGATTATGACAAGTGCATAGCGATTATTGATCAAGTCATTGATGCCCATGTTTTAGTCGCTT
ATCGTTAA

Upstream 100 bases:

>100_bases
TGGAGAGAAAAATAGCTGAAAACGATTTTTTGAAAGAGATTATTACATCACGATCCTTTTTATAAACACAAGGTTATAGA
CATATTTAGGAGGCAGAATA

Downstream 100 bases:

>100_bases
AAAAGCATTGTCCTTACTACTTAAGGACAATGCTTTTTATTTATTTTATTTTCACTAAATATCTACCAGTCACGCCACCG
TTCATTACTTGGTGAAGAGC

Product: transcription regulator

Products: NA

Alternate protein names: Transcription Regulator; Transcriptional Regulator; GntR Family Transcriptional Regulator

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MTTKRKETRESVCYREIKKKIRNGELKPGDRLIENTLSQQLEISRTPIRKAIGMLAADGYVEYNDFRGAFVRDSIINKER
YFEMTEIIGLFLKQAIQKIRTKKIAFNKMRVVAKLVEIEREQPTDPATYFEYEKWFVSDLLTYMKNNYYLKISDDFFNNI
QEFGDEEVIKIAQNACVKTIANIQRFIDALDVQDYDKCIAIIDQVIDAHVLVAYR

Sequences:

>Translated_215_residues
MTTKRKETRESVCYREIKKKIRNGELKPGDRLIENTLSQQLEISRTPIRKAIGMLAADGYVEYNDFRGAFVRDSIINKER
YFEMTEIIGLFLKQAIQKIRTKKIAFNKMRVVAKLVEIEREQPTDPATYFEYEKWFVSDLLTYMKNNYYLKISDDFFNNI
QEFGDEEVIKIAQNACVKTIANIQRFIDALDVQDYDKCIAIIDQVIDAHVLVAYR
>Mature_214_residues
TTKRKETRESVCYREIKKKIRNGELKPGDRLIENTLSQQLEISRTPIRKAIGMLAADGYVEYNDFRGAFVRDSIINKERY
FEMTEIIGLFLKQAIQKIRTKKIAFNKMRVVAKLVEIEREQPTDPATYFEYEKWFVSDLLTYMKNNYYLKISDDFFNNIQ
EFGDEEVIKIAQNACVKTIANIQRFIDALDVQDYDKCIAIIDQVIDAHVLVAYR

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25292; Mature: 25160

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKRKETRESVCYREIKKKIRNGELKPGDRLIENTLSQQLEISRTPIRKAIGMLAADGY
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VEYNDFRGAFVRDSIINKERYFEMTEIIGLFLKQAIQKIRTKKIAFNKMRVVAKLVEIER
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQPTDPATYFEYEKWFVSDLLTYMKNNYYLKISDDFFNNIQEFGDEEVIKIAQNACVKTI
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHH
ANIQRFIDALDVQDYDKCIAIIDQVIDAHVLVAYR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEC
>Mature Secondary Structure 
TTKRKETRESVCYREIKKKIRNGELKPGDRLIENTLSQQLEISRTPIRKAIGMLAADGY
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VEYNDFRGAFVRDSIINKERYFEMTEIIGLFLKQAIQKIRTKKIAFNKMRVVAKLVEIER
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQPTDPATYFEYEKWFVSDLLTYMKNNYYLKISDDFFNNIQEFGDEEVIKIAQNACVKTI
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHH
ANIQRFIDALDVQDYDKCIAIIDQVIDAHVLVAYR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA