Click here to switch to the map view.

The map label for this gene is 226223389

Identifier: 226223389

GI number: 226223389

Start: 797179

End: 797931

Strand: Direct

Name: 226223389

Synonym: Lm4b_00787

Alternate gene names: NA

Gene position: 797179-797931 (Clockwise)

Preceding gene: 226223387

Following gene: 226223390

Centisome position: 27.37

GC content: 31.21

Gene sequence:

>753_bases
ATGGCCATCAAAAAATTAAATGATTTTTATTTTAAAAAATTAGGGAACTGGAATTTAATACATAGCTTTTTGAAAGGATT
TTGGCGAGCATTTTTTTTCTTGCTACTATTGTTACTAATTGCTGATTTGATTGTTATGAAATTCGTGAATGATCGTTATT
TTATTCCAGTTATTTTATTAAGTTTATTATGTATTCCTCTCTTATACTACATTTTGATTTACAGTCGAGCTAAGAAATTC
ATCAGAACACGGTATCAATTGCGGAGTTTTGCTGAACTAACAACCATGCGCCGCTATTTATTATATGCTTATTTAGAAAA
AAGTGGTTTTAGTACACGAGCTGATTTGGAAAAATTAATTCGTTTTATTCATTCTGAAATGGCAGAAGAAAAGAAAAATT
ATCAACCACTCAGTACTGTTGTGGGCGTTTTTATCGCAGCATTTTTAGCAATTTTAGGCGGTACATTTCTATTTTTGATG
GATGATGTGGTGGAGCGGCTTATCGCAGCGGTTCTAATCATGGTAATGGCAATTTTACTTTATATTGTAGGCACTTTTAT
TATGTCGATAATTCGCTCTAAATCAGAAAATAATACGAAAAAAGAACGGGTATTAACAAAAGAAATTATAGCAATTCAAA
CGGCAATGCTTGTTAGTGAGAATACTAGTTACCACCCATTTTTAGCGATGGAGAGAAAAATAGCTGAAAACGATTTTTTG
AAAGAGATTATTACATCACGATCCTTTTTATAA

Upstream 100 bases:

>100_bases
AAACTAATTACGATAAAAAAGTGGAAATCTCCTTACAAACTTTAATAAATAGGTGACTCATGGTAAACTTGAATTTAGGA
AAAAAGGAAAAGGTGTAGAA

Downstream 100 bases:

>100_bases
ACACAAGGTTATAGACATATTTAGGAGGCAGAATAATGACAACCAAACGCAAAGAGACTAGAGAAAGTGTTTGTTATCGG
GAAATCAAAAAGAAGATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MAIKKLNDFYFKKLGNWNLIHSFLKGFWRAFFFLLLLLLIADLIVMKFVNDRYFIPVILLSLLCIPLLYYILIYSRAKKF
IRTRYQLRSFAELTTMRRYLLYAYLEKSGFSTRADLEKLIRFIHSEMAEEKKNYQPLSTVVGVFIAAFLAILGGTFLFLM
DDVVERLIAAVLIMVMAILLYIVGTFIMSIIRSKSENNTKKERVLTKEIIAIQTAMLVSENTSYHPFLAMERKIAENDFL
KEIITSRSFL

Sequences:

>Translated_250_residues
MAIKKLNDFYFKKLGNWNLIHSFLKGFWRAFFFLLLLLLIADLIVMKFVNDRYFIPVILLSLLCIPLLYYILIYSRAKKF
IRTRYQLRSFAELTTMRRYLLYAYLEKSGFSTRADLEKLIRFIHSEMAEEKKNYQPLSTVVGVFIAAFLAILGGTFLFLM
DDVVERLIAAVLIMVMAILLYIVGTFIMSIIRSKSENNTKKERVLTKEIIAIQTAMLVSENTSYHPFLAMERKIAENDFL
KEIITSRSFL
>Mature_249_residues
AIKKLNDFYFKKLGNWNLIHSFLKGFWRAFFFLLLLLLIADLIVMKFVNDRYFIPVILLSLLCIPLLYYILIYSRAKKFI
RTRYQLRSFAELTTMRRYLLYAYLEKSGFSTRADLEKLIRFIHSEMAEEKKNYQPLSTVVGVFIAAFLAILGGTFLFLMD
DVVERLIAAVLIMVMAILLYIVGTFIMSIIRSKSENNTKKERVLTKEIIAIQTAMLVSENTSYHPFLAMERKIAENDFLK
EIITSRSFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29285; Mature: 29153

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKKLNDFYFKKLGNWNLIHSFLKGFWRAFFFLLLLLLIADLIVMKFVNDRYFIPVILL
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SLLCIPLLYYILIYSRAKKFIRTRYQLRSFAELTTMRRYLLYAYLEKSGFSTRADLEKLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RFIHSEMAEEKKNYQPLSTVVGVFIAAFLAILGGTFLFLMDDVVERLIAAVLIMVMAILL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIVGTFIMSIIRSKSENNTKKERVLTKEIIAIQTAMLVSENTSYHPFLAMERKIAENDFL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KEIITSRSFL
HHHHHHCCCC
>Mature Secondary Structure 
AIKKLNDFYFKKLGNWNLIHSFLKGFWRAFFFLLLLLLIADLIVMKFVNDRYFIPVILL
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SLLCIPLLYYILIYSRAKKFIRTRYQLRSFAELTTMRRYLLYAYLEKSGFSTRADLEKLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RFIHSEMAEEKKNYQPLSTVVGVFIAAFLAILGGTFLFLMDDVVERLIAAVLIMVMAILL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIVGTFIMSIIRSKSENNTKKERVLTKEIIAIQTAMLVSENTSYHPFLAMERKIAENDFL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KEIITSRSFL
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA