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The map label for this gene is 226223387

Identifier: 226223387

GI number: 226223387

Start: 794861

End: 795889

Strand: Direct

Name: 226223387

Synonym: Lm4b_00785

Alternate gene names: NA

Gene position: 794861-795889 (Clockwise)

Preceding gene: 226223386

Following gene: 226223389

Centisome position: 27.29

GC content: 33.33

Gene sequence:

>1029_bases
ATGAAATGGTCCGAATATGCAAATTTAGCTCAACTAAGTTTAGAAAAATTTTATCTTGCCGATACAAAAGAACAATTTTT
AAATAACTTTTATCCGACAGAAAATCTTGAGGAAGATAATAAAGTTTTTAATTATTGGTGGCTAGCTCACTTGGTGGAAG
TACGATTAGATGCATACTTACGTACAAAAAAACAAGCAGATTTGGAGATAGCAGAAAACACATATTTGCATAATAAAAAT
AGAAATGGTGGAACGCTTATTCATGATTTTTATGATGATATGCTTTGGAATGCACTTGCGGCTTATCGTCTATATAAAGA
GACTGGAAAACCAATTTATCTAGAAGATGCACAGTTGGTTTGGCAGGATTTAGTGGATACTGGTTGGAATAACATAATGG
GAGGTGGCTTTGCTTGGCGTCGACCACAAATGTATTATAAAAACACGCCTGTAAATGCACCATTCATTATTCTTTCTTGT
TGGCTATATAATGAATTTAATGAAACGAAATATTTAGAGTGGGCAATGAAGACCTATGAATGGCAAACTAAAGTCCTTGT
ACGTGAAGATGGTTTTGTAGAAGATGGCATTAATCGTTTAGAAGACGGAGCCATTGATTATGAATGGAAATTCACTTATA
ACCAAGGTGTATATATTGGAGCTAATTTAGAATTATATCGTATTACTAAAGACGCAAAATATTTAGATACTGCGAATAAA
ACTGCAGATATATCATTAAAAGAATTAACGGAAGATGGTATATTTAAGGATGAAGGCAGCGGCGGAGATGAAGGACTATT
CAAAGGGATTTTTTACAGATATTTTACTGATTTAATGGAAGAAACCGCAAATAAAACTTATCGGAATTTTGTATTTAATA
GCTGCCAAGTGCTAGTTGATAATGCAAAATTAGATGGATATTTGTTAATGGGAATGAATTGGAAAGAAAATCCCTCTGGG
AAAATTCCTTATTCAGCAGAATTAAGTGGAATGATCGCACTTGAAATGGCGGCAAAACTAGAACGATAA

Upstream 100 bases:

>100_bases
TGAGAAATTCATGAATGGTAATATTTCAGCTGAAAAAGCTTTATCACAAGCTGAAAAAGAAGGAAACCAAATTTTAAAAG
AAGAGAGAGATAAATAAACG

Downstream 100 bases:

>100_bases
AAAAGCACCTCCTACTTGGAGGTGCTTTTTAGCATTTTGACCGAATCTCCTTCTATAAGCATTGGAGGTAGAGTTTCTTT
GTTTATAGTATCTGGTTTTA

Product: alpha-1,6-mannanase

Products: NA

Alternate protein names: Alpha-1 6-Mannanase; Glycosyl Hydrolase; Glycoside Hydrolase Family Protein; Glycoside Hydrolase; Glycosyl Hydrolase Family; Ricin B Lectin; Hydrolase; Glycosylhydrolase; Glycosidase; Membrane Attached Hydrolase; Glysosyl Hydrolase Family; Exported Glycosylhydrolase; Glycosyl Hydrolase Family Protein

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MKWSEYANLAQLSLEKFYLADTKEQFLNNFYPTENLEEDNKVFNYWWLAHLVEVRLDAYLRTKKQADLEIAENTYLHNKN
RNGGTLIHDFYDDMLWNALAAYRLYKETGKPIYLEDAQLVWQDLVDTGWNNIMGGGFAWRRPQMYYKNTPVNAPFIILSC
WLYNEFNETKYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGAIDYEWKFTYNQGVYIGANLELYRITKDAKYLDTANK
TADISLKELTEDGIFKDEGSGGDEGLFKGIFYRYFTDLMEETANKTYRNFVFNSCQVLVDNAKLDGYLLMGMNWKENPSG
KIPYSAELSGMIALEMAAKLER

Sequences:

>Translated_342_residues
MKWSEYANLAQLSLEKFYLADTKEQFLNNFYPTENLEEDNKVFNYWWLAHLVEVRLDAYLRTKKQADLEIAENTYLHNKN
RNGGTLIHDFYDDMLWNALAAYRLYKETGKPIYLEDAQLVWQDLVDTGWNNIMGGGFAWRRPQMYYKNTPVNAPFIILSC
WLYNEFNETKYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGAIDYEWKFTYNQGVYIGANLELYRITKDAKYLDTANK
TADISLKELTEDGIFKDEGSGGDEGLFKGIFYRYFTDLMEETANKTYRNFVFNSCQVLVDNAKLDGYLLMGMNWKENPSG
KIPYSAELSGMIALEMAAKLER
>Mature_342_residues
MKWSEYANLAQLSLEKFYLADTKEQFLNNFYPTENLEEDNKVFNYWWLAHLVEVRLDAYLRTKKQADLEIAENTYLHNKN
RNGGTLIHDFYDDMLWNALAAYRLYKETGKPIYLEDAQLVWQDLVDTGWNNIMGGGFAWRRPQMYYKNTPVNAPFIILSC
WLYNEFNETKYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGAIDYEWKFTYNQGVYIGANLELYRITKDAKYLDTANK
TADISLKELTEDGIFKDEGSGGDEGLFKGIFYRYFTDLMEETANKTYRNFVFNSCQVLVDNAKLDGYLLMGMNWKENPSG
KIPYSAELSGMIALEMAAKLER

Specific function: Unknown

COG id: COG4833

COG function: function code G; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40153; Mature: 40153

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWSEYANLAQLSLEKFYLADTKEQFLNNFYPTENLEEDNKVFNYWWLAHLVEVRLDAYL
CCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RTKKQADLEIAENTYLHNKNRNGGTLIHDFYDDMLWNALAAYRLYKETGKPIYLEDAQLV
HHCCCCCCEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHH
WQDLVDTGWNNIMGGGFAWRRPQMYYKNTPVNAPFIILSCWLYNEFNETKYLEWAMKTYE
HHHHHHCCCCCCCCCCCEECCCCEEECCCCCCCCEEEEEEEHHCCCCCCHHHHHHHHHHC
WQTKVLVREDGFVEDGINRLEDGAIDYEWKFTYNQGVYIGANLELYRITKDAKYLDTANK
EEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCEEEECCEEEEEEECCCHHHHCCCC
TADISLKELTEDGIFKDEGSGGDEGLFKGIFYRYFTDLMEETANKTYRNFVFNSCQVLVD
CCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
NAKLDGYLLMGMNWKENPSGKIPYSAELSGMIALEMAAKLER
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHEEHHHHCCC
>Mature Secondary Structure
MKWSEYANLAQLSLEKFYLADTKEQFLNNFYPTENLEEDNKVFNYWWLAHLVEVRLDAYL
CCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RTKKQADLEIAENTYLHNKNRNGGTLIHDFYDDMLWNALAAYRLYKETGKPIYLEDAQLV
HHCCCCCCEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHH
WQDLVDTGWNNIMGGGFAWRRPQMYYKNTPVNAPFIILSCWLYNEFNETKYLEWAMKTYE
HHHHHHCCCCCCCCCCCEECCCCEEECCCCCCCCEEEEEEEHHCCCCCCHHHHHHHHHHC
WQTKVLVREDGFVEDGINRLEDGAIDYEWKFTYNQGVYIGANLELYRITKDAKYLDTANK
EEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCEEEECCEEEEEEECCCHHHHCCCC
TADISLKELTEDGIFKDEGSGGDEGLFKGIFYRYFTDLMEETANKTYRNFVFNSCQVLVD
CCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
NAKLDGYLLMGMNWKENPSGKIPYSAELSGMIALEMAAKLER
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA