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The map label for this gene is yvpB [H]

Identifier: 226223355

GI number: 226223355

Start: 763786

End: 764514

Strand: Direct

Name: yvpB [H]

Synonym: Lm4b_00752

Alternate gene names: 226223355

Gene position: 763786-764514 (Clockwise)

Preceding gene: 226223354

Following gene: 226223357

Centisome position: 26.22

GC content: 40.33

Gene sequence:

>729_bases
ATGCGAATTTGGATAAAATCACTGCTTGTCATTACAGCGTGTATATTTAGTTTGACCCTTCTAAATACGAAATATACCTT
TTATTCACCAACCGTCAAACTCGAAAGCGCCAAAGTCGTTTATAAATTAGACAACGAACCTTTTAATGTAAGATTAGATG
TGCCACTAGTGAATCAAATGGATGCTCCTACGCTTTTTAATGGCTGCGAAGTAACGAGTTTAGCAATGCTCTTACAATTC
AATGGAAAGCGTGTAACGAAAAATGAGTTAGCGAATAATCTCCCAACAACACCAATCGAACAAAATGGTTTACACGGTAA
TCCGGATAAAGCATTTGTTGGGAGCATTAGCGGCGATAGCCCTGGTCTAGGCGTGAATCATGCTCCCATAGCTAATCTGG
CCGCTAAATACGTTAACGAAGCACACGTCCACGATATTAGCGGGAATAGCATTCAAGACATCATTACTGTACTCAGCACA
GGCGCACCAGTATGGATTATCACTACCACCGACTACCATGCACCCAAAAACTGGCAAACCGTCCAAACAAAAGAAGGTAA
AAAGAAAATCACGTATTCGATGCACAGTGTGGTAATTACCGGGTTCGATAAAAACAATTTTTATATTAATGATCCATATG
GACATAAAAACCGTGCCGTAAAAAGAAGTGTACTTGAAGAAGGCTGGTCTGCTATGGGAAAGCAAGCCATTTACCTAAGT
CACCCATAA

Upstream 100 bases:

>100_bases
AGTGAGCGAAGAAGCGGTCGAAGTAACAGAAGAGCCAGAATCAGAAACAAAAGATCCAGGAGAGCCAGTCCTAGCAGAAA
ATGTCTAGGAAGCATGTATA

Downstream 100 bases:

>100_bases
AAAAATCGTTTGAAAGCATATCTCATGCTCTCAAACGATTTTTTATATTTTCTTCTTAATAAATAGGACGACAGCAAGCG
CGACAAGCACCACTCCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MRIWIKSLLVITACIFSLTLLNTKYTFYSPTVKLESAKVVYKLDNEPFNVRLDVPLVNQMDAPTLFNGCEVTSLAMLLQF
NGKRVTKNELANNLPTTPIEQNGLHGNPDKAFVGSISGDSPGLGVNHAPIANLAAKYVNEAHVHDISGNSIQDIITVLST
GAPVWIITTTDYHAPKNWQTVQTKEGKKKITYSMHSVVITGFDKNNFYINDPYGHKNRAVKRSVLEEGWSAMGKQAIYLS
HP

Sequences:

>Translated_242_residues
MRIWIKSLLVITACIFSLTLLNTKYTFYSPTVKLESAKVVYKLDNEPFNVRLDVPLVNQMDAPTLFNGCEVTSLAMLLQF
NGKRVTKNELANNLPTTPIEQNGLHGNPDKAFVGSISGDSPGLGVNHAPIANLAAKYVNEAHVHDISGNSIQDIITVLST
GAPVWIITTTDYHAPKNWQTVQTKEGKKKITYSMHSVVITGFDKNNFYINDPYGHKNRAVKRSVLEEGWSAMGKQAIYLS
HP
>Mature_242_residues
MRIWIKSLLVITACIFSLTLLNTKYTFYSPTVKLESAKVVYKLDNEPFNVRLDVPLVNQMDAPTLFNGCEVTSLAMLLQF
NGKRVTKNELANNLPTTPIEQNGLHGNPDKAFVGSISGDSPGLGVNHAPIANLAAKYVNEAHVHDISGNSIQDIITVLST
GAPVWIITTTDYHAPKNWQTVQTKEGKKKITYSMHSVVITGFDKNNFYINDPYGHKNRAVKRSVLEEGWSAMGKQAIYLS
HP

Specific function: Unknown

COG id: COG4990

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016997 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26801; Mature: 26801

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIWIKSLLVITACIFSLTLLNTKYTFYSPTVKLESAKVVYKLDNEPFNVRLDVPLVNQM
CCHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEECEEEEEEECCCCEEEEECCCCCCCC
DAPTLFNGCEVTSLAMLLQFNGKRVTKNELANNLPTTPIEQNGLHGNPDKAFVGSISGDS
CCCCCCCCCCHHHHHHHHHCCCCEECHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCC
PGLGVNHAPIANLAAKYVNEAHVHDISGNSIQDIITVLSTGAPVWIITTTDYHAPKNWQT
CCCCCCCCHHHHHHHHHHCHHHEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCE
VQTKEGKKKITYSMHSVVITGFDKNNFYINDPYGHKNRAVKRSVLEEGWSAMGKQAIYLS
EECCCCCEEEEEEEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEE
HP
CC
>Mature Secondary Structure
MRIWIKSLLVITACIFSLTLLNTKYTFYSPTVKLESAKVVYKLDNEPFNVRLDVPLVNQM
CCHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEECEEEEEEECCCCEEEEECCCCCCCC
DAPTLFNGCEVTSLAMLLQFNGKRVTKNELANNLPTTPIEQNGLHGNPDKAFVGSISGDS
CCCCCCCCCCHHHHHHHHHCCCCEECHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCC
PGLGVNHAPIANLAAKYVNEAHVHDISGNSIQDIITVLSTGAPVWIITTTDYHAPKNWQT
CCCCCCCCHHHHHHHHHHCHHHEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCE
VQTKEGKKKITYSMHSVVITGFDKNNFYINDPYGHKNRAVKRSVLEEGWSAMGKQAIYLS
EECCCCCEEEEEEEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEE
HP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]