Click here to switch to the map view.

The map label for this gene is licH [H]

Identifier: 226223151

GI number: 226223151

Start: 560791

End: 562107

Strand: Reverse

Name: licH [H]

Synonym: Lm4b_00548b

Alternate gene names: 226223151

Gene position: 562107-560791 (Counterclockwise)

Preceding gene: 226223154

Following gene: 226223150

Centisome position: 19.3

GC content: 41.76

Gene sequence:

>1317_bases
ATGACTAAAGGTATTAAAATCGCAACTATTGGTGGCGGATCAAGTTATACACCTGAACTAATCGAAGGATTTATTAAACG
TCAAGACGAATTACCAGTTCGTGAACTATGGTTAGTCGACGTAGAAGCTGGCCGTGAAAAATTAGAAATCGTTGGTAATT
TAGCAAAACGTATGGTAGAAAAAGCTGGCGTTGACATGGAAGTACATTTAACACTAGACCGTGAAGAAGCTTTAAAAGAT
GCTGATTTCGTAACAACACAATTACGTGTAGGTTTACTAGATGCACGTGTGAAAGATGAGCGCATCCCGAATTCATATGG
CGTTGTTGGTCAAGAAACAAACGGACCAGGCGGCATGTTCAAAGGACTTCGCACAATCCCAGTTATTTTAGATATTTGTA
AAGACATGGAACGCCTTTGCCCAGATGCTTGGTTAATCAACTTTGCTAACCCTGCAGGAATGGTAACAGAAGCAGTTCTT
CGTTACAGTAACCAAAAGAAAGTTGTCGGCTTATGTAACGGCCCTATCGGCATCGAACGCAATATCGCTGAAACTCTTGG
CGTAGACGTTTCTGAAATTTACGTAGAATTCGTTGGTCTAAACCACATGGTATTCGCGAAAACTGTTTATCATAATGGCA
AAGACGTAACAAAAGATGTTGTTTTCAAAATGACAGAAGATGAAGCTGGCTCAAGCCTTAAAAACATCAACGCAACTGGT
TGGGACAAAACGTTCTTGCGTACACTAAACATGATTCCAATCGACTACTTGCGCTACTACTGGCAAACAAAACAACAACT
GGAAGACCAAGCTCGCGCATACGCAGAACATGGTACTCGTGCAGAAGTTGTTAAAAAAGTAGAAGCTGAACTTTTCGAGC
TTTACAAACAAGAAGAACTTGCTGAAAAACCAAAACAATTAGAACAACGCGGCGGCGCTTACTACAGTGAAGCAGCATGT
AACCTAATTAACTCTATCTACAACGACAAACGCGACATTCAAATCGTTAATACTCGTAACAATGGTGCCATCCTTGATAT
CGACCCTGATTCCGCAGTAGAAACAAACTGTGTCATCACTCGCCAAGGCCCAATTCCACTAGCAAGCGGACGCCTTCCAA
TCGCTATCAACGGCATCATCCAAGAAATCAAAACTTTCGAGCGCCTAACAGCCGAAGCAGCAGTTACTGGAGATTACGAC
AAAGCACTCCTTGCAATGACAATCAACCCACTAACTCCAAGCGAATCTGTAGCCCGCGAAATGCTGGACGAACTTTTAGA
AGCACATAAAGAGTATTTACCGAATTTCTTTAAATAA

Upstream 100 bases:

>100_bases
AGCTATTTTTTCATAAAATTCCTATACTATAACTGTGAGAAGAAAAGGTGATACCAAATAAGTAAGCCTTTTCAAAAAAA
TATCCTTGGAGGTATAAATA

Downstream 100 bases:

>100_bases
ATGGAATGTAGTTTTTAAGTATAATAGTTTTTGAAAGAGGCATCTTGTGTTGCCTCTTTTTTATGTAATTTCTCACTATT
CTAACTTACCATTTCGAGCT

Product: 6-phospho-beta-glucosidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MTKGIKIATIGGGSSYTPELIEGFIKRQDELPVRELWLVDVEAGREKLEIVGNLAKRMVEKAGVDMEVHLTLDREEALKD
ADFVTTQLRVGLLDARVKDERIPNSYGVVGQETNGPGGMFKGLRTIPVILDICKDMERLCPDAWLINFANPAGMVTEAVL
RYSNQKKVVGLCNGPIGIERNIAETLGVDVSEIYVEFVGLNHMVFAKTVYHNGKDVTKDVVFKMTEDEAGSSLKNINATG
WDKTFLRTLNMIPIDYLRYYWQTKQQLEDQARAYAEHGTRAEVVKKVEAELFELYKQEELAEKPKQLEQRGGAYYSEAAC
NLINSIYNDKRDIQIVNTRNNGAILDIDPDSAVETNCVITRQGPIPLASGRLPIAINGIIQEIKTFERLTAEAAVTGDYD
KALLAMTINPLTPSESVAREMLDELLEAHKEYLPNFFK

Sequences:

>Translated_438_residues
MTKGIKIATIGGGSSYTPELIEGFIKRQDELPVRELWLVDVEAGREKLEIVGNLAKRMVEKAGVDMEVHLTLDREEALKD
ADFVTTQLRVGLLDARVKDERIPNSYGVVGQETNGPGGMFKGLRTIPVILDICKDMERLCPDAWLINFANPAGMVTEAVL
RYSNQKKVVGLCNGPIGIERNIAETLGVDVSEIYVEFVGLNHMVFAKTVYHNGKDVTKDVVFKMTEDEAGSSLKNINATG
WDKTFLRTLNMIPIDYLRYYWQTKQQLEDQARAYAEHGTRAEVVKKVEAELFELYKQEELAEKPKQLEQRGGAYYSEAAC
NLINSIYNDKRDIQIVNTRNNGAILDIDPDSAVETNCVITRQGPIPLASGRLPIAINGIIQEIKTFERLTAEAAVTGDYD
KALLAMTINPLTPSESVAREMLDELLEAHKEYLPNFFK
>Mature_437_residues
TKGIKIATIGGGSSYTPELIEGFIKRQDELPVRELWLVDVEAGREKLEIVGNLAKRMVEKAGVDMEVHLTLDREEALKDA
DFVTTQLRVGLLDARVKDERIPNSYGVVGQETNGPGGMFKGLRTIPVILDICKDMERLCPDAWLINFANPAGMVTEAVLR
YSNQKKVVGLCNGPIGIERNIAETLGVDVSEIYVEFVGLNHMVFAKTVYHNGKDVTKDVVFKMTEDEAGSSLKNINATGW
DKTFLRTLNMIPIDYLRYYWQTKQQLEDQARAYAEHGTRAEVVKKVEAELFELYKQEELAEKPKQLEQRGGAYYSEAACN
LINSIYNDKRDIQIVNTRNNGAILDIDPDSAVETNCVITRQGPIPLASGRLPIAINGIIQEIKTFERLTAEAAVTGDYDK
ALLAMTINPLTPSESVAREMLDELLEAHKEYLPNFFK

Specific function: Hydrolyzes phospho-beta-glucosides (Probable) [H]

COG id: COG1486

COG function: function code G; Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 4 family [H]

Homologues:

Organism=Escherichia coli, GI1788029, Length=439, Percent_Identity=51.9362186788155, Blast_Score=450, Evalue=1e-128,
Organism=Escherichia coli, GI1790560, Length=455, Percent_Identity=26.5934065934066, Blast_Score=156, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019802
- InterPro:   IPR001088
- InterPro:   IPR022616
- InterPro:   IPR015955
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02056 Glyco_hydro_4; PF11975 Glyco_hydro_4C [H]

EC number: =3.2.1.86 [H]

Molecular weight: Translated: 48992; Mature: 48860

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS01324 GLYCOSYL_HYDROL_F4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKGIKIATIGGGSSYTPELIEGFIKRQDELPVRELWLVDVEAGREKLEIVGNLAKRMVE
CCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHEEEEEHHCCHHHHHHHHHHHHHHHH
KAGVDMEVHLTLDREEALKDADFVTTQLRVGLLDARVKDERIPNSYGVVGQETNGPGGMF
HHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
KGLRTIPVILDICKDMERLCPDAWLINFANPAGMVTEAVLRYSNQKKVVGLCNGPIGIER
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
NIAETLGVDVSEIYVEFVGLNHMVFAKTVYHNGKDVTKDVVFKMTEDEAGSSLKNINATG
HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHEEECCCCCCCCHHCCCCCC
WDKTFLRTLNMIPIDYLRYYWQTKQQLEDQARAYAEHGTRAEVVKKVEAELFELYKQEEL
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AEKPKQLEQRGGAYYSEAACNLINSIYNDKRDIQIVNTRNNGAILDIDPDSAVETNCVIT
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEE
RQGPIPLASGRLPIAINGIIQEIKTFERLTAEAAVTGDYDKALLAMTINPLTPSESVARE
ECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHH
MLDELLEAHKEYLPNFFK
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TKGIKIATIGGGSSYTPELIEGFIKRQDELPVRELWLVDVEAGREKLEIVGNLAKRMVE
CCCEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHEEEEEHHCCHHHHHHHHHHHHHHHH
KAGVDMEVHLTLDREEALKDADFVTTQLRVGLLDARVKDERIPNSYGVVGQETNGPGGMF
HHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
KGLRTIPVILDICKDMERLCPDAWLINFANPAGMVTEAVLRYSNQKKVVGLCNGPIGIER
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
NIAETLGVDVSEIYVEFVGLNHMVFAKTVYHNGKDVTKDVVFKMTEDEAGSSLKNINATG
HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHEEECCCCCCCCHHCCCCCC
WDKTFLRTLNMIPIDYLRYYWQTKQQLEDQARAYAEHGTRAEVVKKVEAELFELYKQEEL
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AEKPKQLEQRGGAYYSEAACNLINSIYNDKRDIQIVNTRNNGAILDIDPDSAVETNCVIT
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEE
RQGPIPLASGRLPIAINGIIQEIKTFERLTAEAAVTGDYDKALLAMTINPLTPSESVARE
ECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHH
MLDELLEAHKEYLPNFFK
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8990303; 9384377; 8969509 [H]