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The map label for this gene is gatY [H]

Identifier: 226222986

GI number: 226222986

Start: 388742

End: 389602

Strand: Direct

Name: gatY [H]

Synonym: Lm4b_00378

Alternate gene names: 226222986

Gene position: 388742-389602 (Clockwise)

Preceding gene: 226222985

Following gene: 226222987

Centisome position: 13.35

GC content: 39.14

Gene sequence:

>861_bases
ATGTTATATACAATGAAAGATCTTTTAGCAGTAGGAAAAGAGCATCAATTTGCGGTACCAGCATTTAATATCTGTAGTTT
TGATATGTTAAAGGCGATAATGGAGGAAGTGGAGGCAAATAATGCTCCTGTAATTTTAGAAATTCATCCGGATGAAATAG
AGTATCTCGGTGATAACTTTGTTGCAACAGTCAGAGAATACGCACATAAAAGTAAGGTGCCGGTCGTTATTCATATGGAC
CACGGTGGAACAATCAAAGATGTGATGCGGGCAATTAGAAATGGCTATACTTCTGTCATGATTGATGCTTCAAGAGCCAG
TTATGAAGAGAACGTGGCGTTGACTAAGCAAGTGGTTGAACTTGCGCATAAAGTCGGTGTTTCTGTTGAAGCGGAACTTG
GAACAATCGGGAACAATGGTTCAGCAGAAGGCGGGGCGGATACCATCATATATACTGACCCTGACCAAGCAGAAGATTTC
GTACAGAGAACTGGCATTGATACGCTAGCCGTAGCTATTGGAACGGCGCATGGGTTATACCCTAAAGATAAAAAACCAGA
ACTGAATATGCCTCTTTTAAAAGAATTAAATAAACGCTTGGATATTCCGTTTGTACTTCATGGTGGTTCGGGAAATCCAG
ATAAAGAAGTCAGTGAATCTGTACAGTACGGTGTTAGGAAAGTAAACCTTAGTTCAGATCTGAAAAGTGTGTTTTTTGAA
GAAGTTCGCCGCGTTTTAGTGGACAATCCTGCGATGTATGAACCAAATCAAGTGTACCCATCAGCAAATGAAAAAGTAAA
AGAAGTTGTAAGACATAAATTACACATTTTAAATACTACTGGTCAAAGAGATAAATACTAA

Upstream 100 bases:

>100_bases
ACTTACTAGCAATTGCAGCAGGCACAGTCGTGACAGCAATTTCTGTCGGACTATTAAAAACCCCATTAAACAAGCGAAAA
AATAAAGAGGAGATGATATA

Downstream 100 bases:

>100_bases
TAAGAAGGGGAGAAGCGCTAGTTATAGTGCTTTTGCCCTTTAAGGAGTGGAGGAACATGTTAAGCACAGCGAAGGAACGG
CAACTAAAAATCGTTAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase [H]

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MLYTMKDLLAVGKEHQFAVPAFNICSFDMLKAIMEEVEANNAPVILEIHPDEIEYLGDNFVATVREYAHKSKVPVVIHMD
HGGTIKDVMRAIRNGYTSVMIDASRASYEENVALTKQVVELAHKVGVSVEAELGTIGNNGSAEGGADTIIYTDPDQAEDF
VQRTGIDTLAVAIGTAHGLYPKDKKPELNMPLLKELNKRLDIPFVLHGGSGNPDKEVSESVQYGVRKVNLSSDLKSVFFE
EVRRVLVDNPAMYEPNQVYPSANEKVKEVVRHKLHILNTTGQRDKY

Sequences:

>Translated_286_residues
MLYTMKDLLAVGKEHQFAVPAFNICSFDMLKAIMEEVEANNAPVILEIHPDEIEYLGDNFVATVREYAHKSKVPVVIHMD
HGGTIKDVMRAIRNGYTSVMIDASRASYEENVALTKQVVELAHKVGVSVEAELGTIGNNGSAEGGADTIIYTDPDQAEDF
VQRTGIDTLAVAIGTAHGLYPKDKKPELNMPLLKELNKRLDIPFVLHGGSGNPDKEVSESVQYGVRKVNLSSDLKSVFFE
EVRRVLVDNPAMYEPNQVYPSANEKVKEVVRHKLHILNTTGQRDKY
>Mature_286_residues
MLYTMKDLLAVGKEHQFAVPAFNICSFDMLKAIMEEVEANNAPVILEIHPDEIEYLGDNFVATVREYAHKSKVPVVIHMD
HGGTIKDVMRAIRNGYTSVMIDASRASYEENVALTKQVVELAHKVGVSVEAELGTIGNNGSAEGGADTIIYTDPDQAEDF
VQRTGIDTLAVAIGTAHGLYPKDKKPELNMPLLKELNKRLDIPFVLHGGSGNPDKEVSESVQYGVRKVNLSSDLKSVFFE
EVRRVLVDNPAMYEPNQVYPSANEKVKEVVRHKLHILNTTGQRDKY

Specific function: Catalytic subunit of the tagatose-1,6-bisphosphate aldolase GatYZ, which catalyzes the reversible aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to produce tagatose 1,6- bisphosphate (T

COG id: COG0191

COG function: function code G; Fructose/tagatose bisphosphate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class II fructose-bisphosphate aldolase family. TagBP aldolase GatY subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789526, Length=283, Percent_Identity=36.0424028268551, Blast_Score=184, Evalue=5e-48,
Organism=Escherichia coli, GI87082041, Length=269, Percent_Identity=34.9442379182156, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1788072, Length=260, Percent_Identity=34.2307692307692, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1789293, Length=306, Percent_Identity=26.4705882352941, Blast_Score=98, Evalue=8e-22,
Organism=Saccharomyces cerevisiae, GI6322790, Length=286, Percent_Identity=24.8251748251748, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000771
- InterPro:   IPR011288 [H]

Pfam domain/function: PF01116 F_bP_aldolase [H]

EC number: =4.1.2.40 [H]

Molecular weight: Translated: 31737; Mature: 31737

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYTMKDLLAVGKEHQFAVPAFNICSFDMLKAIMEEVEANNAPVILEIHPDEIEYLGDNF
CCCCHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCHH
VATVREYAHKSKVPVVIHMDHGGTIKDVMRAIRNGYTSVMIDASRASYEENVALTKQVVE
HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEECHHHCCHHHHHHHHHHHH
LAHKVGVSVEAELGTIGNNGSAEGGADTIIYTDPDQAEDFVQRTGIDTLAVAIGTAHGLY
HHHHHCCEEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCC
PKDKKPELNMPLLKELNKRLDIPFVLHGGSGNPDKEVSESVQYGVRKVNLSSDLKSVFFE
CCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHEEECCHHHHHHHHHH
EVRRVLVDNPAMYEPNQVYPSANEKVKEVVRHKLHILNTTGQRDKY
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLYTMKDLLAVGKEHQFAVPAFNICSFDMLKAIMEEVEANNAPVILEIHPDEIEYLGDNF
CCCCHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCHH
VATVREYAHKSKVPVVIHMDHGGTIKDVMRAIRNGYTSVMIDASRASYEENVALTKQVVE
HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEECHHHCCHHHHHHHHHHHH
LAHKVGVSVEAELGTIGNNGSAEGGADTIIYTDPDQAEDFVQRTGIDTLAVAIGTAHGLY
HHHHHCCEEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCC
PKDKKPELNMPLLKELNKRLDIPFVLHGGSGNPDKEVSESVQYGVRKVNLSSDLKSVFFE
CCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHEEECCHHHHHHHHHH
EVRRVLVDNPAMYEPNQVYPSANEKVKEVVRHKLHILNTTGQRDKY
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA