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The map label for this gene is yaaA [H]

Identifier: 226222643

GI number: 226222643

Start: 4644

End: 4865

Strand: Direct

Name: yaaA [H]

Synonym: Lm4b_00004

Alternate gene names: 226222643

Gene position: 4644-4865 (Clockwise)

Preceding gene: 226222642

Following gene: 226222644

Centisome position: 0.16

GC content: 40.99

Gene sequence:

>222_bases
TTGGCTGAAACAGTAAAGATAAATAGCGAGTTCGTAACGCTTGGTCAACTTTTACAAATGATTGATGTAGTTTCAACTGG
TGGAATGGCGAAAGCGTACCTTAGTGAAAATACGATTTACATCAACGGAGAGCAAGACAACCGCCGGGGGAAAAAGCTTC
GTAATGGCGATGTTATCTTAGTTCCCGGTGTTGGAAAAGTGAAAATCGAGCAAGGAAAATAA

Upstream 100 bases:

>100_bases
AAAAAGCTGAAAAACGAATATATGAAAATATTCTTTGTATTATTGGCAAAACTTTAGTAAAATAGAAGGTAGTGATAAAA
AAAGATTGGGCGTGAAATTT

Downstream 100 bases:

>100_bases
CAGATGCATTTAGAAAGTATTGTTTTAAGAAATTTCCGGAATTACGAAAACTTAGAACTAGAATTTTCCCCATCTGTTAA
TGTTTTTCTTGGTGAGAATG

Product: S4-like RNA binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MAETVKINSEFVTLGQLLQMIDVVSTGGMAKAYLSENTIYINGEQDNRRGKKLRNGDVILVPGVGKVKIEQGK

Sequences:

>Translated_73_residues
MAETVKINSEFVTLGQLLQMIDVVSTGGMAKAYLSENTIYINGEQDNRRGKKLRNGDVILVPGVGKVKIEQGK
>Mature_72_residues
AETVKINSEFVTLGQLLQMIDVVSTGGMAKAYLSENTIYINGEQDNRRGKKLRNGDVILVPGVGKVKIEQGK

Specific function: Unknown

COG id: COG2501

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014330
- InterPro:   IPR002942 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7965; Mature: 7834

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETVKINSEFVTLGQLLQMIDVVSTGGMAKAYLSENTIYINGEQDNRRGKKLRNGDVIL
CCCEEEECCCEEEHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCEECCCCEEE
VPGVGKVKIEQGK
ECCCCEEEEECCC
>Mature Secondary Structure 
AETVKINSEFVTLGQLLQMIDVVSTGGMAKAYLSENTIYINGEQDNRRGKKLRNGDVIL
CCEEEECCCEEEHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCEECCCCEEE
VPGVGKVKIEQGK
ECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987847; 7584024; 9384377 [H]