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The map label for this gene is ypaA [H]

Identifier: 225861880

GI number: 225861880

Start: 1914915

End: 1915316

Strand: Reverse

Name: ypaA [H]

Synonym: SPT_2056

Alternate gene names: 225861880

Gene position: 1915316-1914915 (Counterclockwise)

Preceding gene: 225861881

Following gene: 225861879

Centisome position: 90.68

GC content: 33.58

Gene sequence:

>402_bases
ATGTCAATTATTACAATTATTTTAACAACGATCGTTGCTTTGGAGCATTTTTACATTTTTTATTTGGAAAGTATTGCTAC
GCGATCAGATGCGACTAGTCGTGTATTTAATATGGAAAAGGAAGAATTGGCTCATCCGTCAGTAAGTTCATTGTTCAAAA
ATCAAGGGATTTATAAGGCTCTGCTAGGAGTCTTTCTCTGGTATGGCATTTATTTCTCACAGAATTTAGAAATTGTGACT
ATTTTTGTCTTATTTGTGATTGGTGCTGCGACTTACGGCTCTTTAACAGCGGATAAAAAAATTATTTTGAAGCAAGGTGG
ATCAGCTATTTTGGCCTTGATTAGTATTTTACTCTTTAAAATACACTTGAAGGTCGATTCTAATCTCGCTAATCCTTTTT
AA

Upstream 100 bases:

>100_bases
ATGGAAAGTATCTTAACAGAGTTTGAGAGAACAGAACTCAGCCGTTTATTAAATAAATTGGTTTTGGGTATTGAAAATAT
AGAAATTTAAGGAGAAATAG

Downstream 100 bases:

>100_bases
TCCAGAATAAGGGAAATATGTTATACTTGTTTTTAAGAAAAAAGTCTCATTGAATTGGTTTTGAGGAGTTAGAAATGAAA
GTATTAGTGACAGGTTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSIITIILTTIVALEHFYIFYLESIATRSDATSRVFNMEKEELAHPSVSSLFKNQGIYKALLGVFLWYGIYFSQNLEIVT
IFVLFVIGAATYGSLTADKKIILKQGGSAILALISILLFKIHLKVDSNLANPF

Sequences:

>Translated_133_residues
MSIITIILTTIVALEHFYIFYLESIATRSDATSRVFNMEKEELAHPSVSSLFKNQGIYKALLGVFLWYGIYFSQNLEIVT
IFVLFVIGAATYGSLTADKKIILKQGGSAILALISILLFKIHLKVDSNLANPF
>Mature_132_residues
SIITIILTTIVALEHFYIFYLESIATRSDATSRVFNMEKEELAHPSVSSLFKNQGIYKALLGVFLWYGIYFSQNLEIVTI
FVLFVIGAATYGSLTADKKIILKQGGSAILALISILLFKIHLKVDSNLANPF

Specific function: Unknown

COG id: COG3759

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009732 [H]

Pfam domain/function: PF06993 DUF1304 [H]

EC number: NA

Molecular weight: Translated: 14838; Mature: 14707

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIITIILTTIVALEHFYIFYLESIATRSDATSRVFNMEKEELAHPSVSSLFKNQGIYKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCHHHHHHCCCHHHH
LLGVFLWYGIYFSQNLEIVTIFVLFVIGAATYGSLTADKKIILKQGGSAILALISILLFK
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHH
IHLKVDSNLANPF
HHHHCCCCCCCCC
>Mature Secondary Structure 
SIITIILTTIVALEHFYIFYLESIATRSDATSRVFNMEKEELAHPSVSSLFKNQGIYKA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCHHHHHHCCCHHHH
LLGVFLWYGIYFSQNLEIVTIFVLFVIGAATYGSLTADKKIILKQGGSAILALISILLFK
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHH
IHLKVDSNLANPF
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1400208; 11337471 [H]