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The map label for this gene is dppA [C]

Identifier: 225686219

GI number: 225686219

Start: 372808

End: 374391

Strand: Reverse

Name: dppA [C]

Synonym: BMEA_B0387

Alternate gene names: 225686219

Gene position: 374391-372808 (Counterclockwise)

Preceding gene: 225686220

Following gene: 225686218

Centisome position: 31.58

GC content: 57.07

Gene sequence:

>1584_bases
ATGAGGTTGCGTAATTTTTATTCGGCGCTTGCCTTGTCGGCAGCGGTTTTCGCCGGGCCACTCTATGCTGCGGCACCGGC
CATGGCTGCGGGCACGATTTCGGGCGGGTTCGATGTCGGGCCAGGCGGCTTTCAGGGCAATTTCAATCCACTGGCCGCAA
CGGGCGGCTTCACATGGCTTGTCACCTATTTTGAACCGCTGGTGATCTATGACGACAAGCTTGAAAATATCGTGGGGGAT
CTGGCAAAATCTTTCGAGATCAGCCCCGACCAGTTGACCTATACGTTCAAACTGGCCCATGCCAAATGGCATGACGGCGA
GCCCTTTACATCGAAGGATGCAAAATTCACCTTCGACCTCGCCAGAAACGGCAAGACAGGATCGGTTTTCGCCGCGCGGC
TCGCGTCCATCGCGTCGGTGGAAACGCCCGATGAAAAGACCGTCGTGATAAAGCTCAAGGAGCCAAGCCCCTCCATGCTC
GACACACTCACGAAAGTGATGATGCTGCCCGAACATGCGCTGGCATCCATCCCGCCCGAACAGCTTGCCAAAAATGCCTG
GTGGTCCAGCACGCCGATTGGAACCGGCCCGTTCAAATTCAACAAATATGTTGCCGATCAATATGTCGAACTTACCGCCA
ATCCCGATTATCGCGGCGGCAGGCCGCAGGTGGACAAGCTCATCAATCGTTATTTCGCCGACCCGGCTGCGGCCATCGCC
GCGCTGCGCTCCGGTGAAATCCAGTTCACCTATGTCGATTCCAACGATGTTTCGACTTTCAGCAGCGACAGCGCCTTTCG
CGTGATCGAAGGCGACTCCTTCGTGGTCAATTATGTCGGCTTCAATCAGGAGGTCCCACTCTGGAAGGACCTGAAAGTGC
GGCAGGCCTTCATGCACGCGATCAACCGCGATGCAATCATCCAGAGCCTTTATGGCGGCGCGGCCAAGCCCGCAAACTGC
GTCTATGTTGCCGACCGTCTGGTACCCAAGGCTATCGATGCCTATGCCTACGACCCGCAAAAGGCCAGGCAGCTTCTGGA
TGAAGCCGGATGGGACAAGATCAACGGCAGCAAGCCGATCACCATCCTGACCTATTACAATTCGCCGCTCGTTGCCAATG
TGCTGGCCGCGATGCAGGCCATGCTGGCACAGGTCGGCATCAACATCGTTCCACGCACGGTCGATACCCCGACCTATAAT
TCCATCGTCTACAAACAGGGCGGCACTGCGGATGAGTTTCCGCTGATCTTCGCCGGCCTACAGAACGGCCCCGATCCATC
CAGCATCAATATTGGACTCAACGAGAAGCAGATTCCGCCCGCAGGCTCCAATATAATGCGTATCCGTATGCCGGCAGTGA
CAAAGGCGCTTGATGCCGCCCTTGCCGAAACAAACCCGGCCAAGCGCGACGCACGCTATCAGGATGTGTGCAAGGCGACC
AATGCCAATCTCCCCTGGGGGACGATGTGGGTCGCCAACCGCTATGGCGTGGCTTCCAGCAAGCTGGAGAATTTCATCTG
GACACCGGCACCGGCAGGCGGCCCCTATCAGGCTCACCCGGAAAAATGGTCGATACTCGAATAA

Upstream 100 bases:

>100_bases
GCGATGTGGTTGCAGTGCGCAAGCAACTCGACCGCCACTATTCGGGTATCAATCAGGTGATTGCCCGAAACAGAACAGCT
TCGTTGACTGGGAGGAAGAC

Downstream 100 bases:

>100_bases
CCGGGCCGCGCCTGCAACCAGCCAAAGCGGACGGCGTCTCATGCAGACACTGTCCCGGCTCCTTCTACCCAAACACCAAC
GACAGGCTGTAGAAACTTCA

Product: extracellular solute-binding protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MRLRNFYSALALSAAVFAGPLYAAAPAMAAGTISGGFDVGPGGFQGNFNPLAATGGFTWLVTYFEPLVIYDDKLENIVGD
LAKSFEISPDQLTYTFKLAHAKWHDGEPFTSKDAKFTFDLARNGKTGSVFAARLASIASVETPDEKTVVIKLKEPSPSML
DTLTKVMMLPEHALASIPPEQLAKNAWWSSTPIGTGPFKFNKYVADQYVELTANPDYRGGRPQVDKLINRYFADPAAAIA
ALRSGEIQFTYVDSNDVSTFSSDSAFRVIEGDSFVVNYVGFNQEVPLWKDLKVRQAFMHAINRDAIIQSLYGGAAKPANC
VYVADRLVPKAIDAYAYDPQKARQLLDEAGWDKINGSKPITILTYYNSPLVANVLAAMQAMLAQVGINIVPRTVDTPTYN
SIVYKQGGTADEFPLIFAGLQNGPDPSSINIGLNEKQIPPAGSNIMRIRMPAVTKALDAALAETNPAKRDARYQDVCKAT
NANLPWGTMWVANRYGVASSKLENFIWTPAPAGGPYQAHPEKWSILE

Sequences:

>Translated_527_residues
MRLRNFYSALALSAAVFAGPLYAAAPAMAAGTISGGFDVGPGGFQGNFNPLAATGGFTWLVTYFEPLVIYDDKLENIVGD
LAKSFEISPDQLTYTFKLAHAKWHDGEPFTSKDAKFTFDLARNGKTGSVFAARLASIASVETPDEKTVVIKLKEPSPSML
DTLTKVMMLPEHALASIPPEQLAKNAWWSSTPIGTGPFKFNKYVADQYVELTANPDYRGGRPQVDKLINRYFADPAAAIA
ALRSGEIQFTYVDSNDVSTFSSDSAFRVIEGDSFVVNYVGFNQEVPLWKDLKVRQAFMHAINRDAIIQSLYGGAAKPANC
VYVADRLVPKAIDAYAYDPQKARQLLDEAGWDKINGSKPITILTYYNSPLVANVLAAMQAMLAQVGINIVPRTVDTPTYN
SIVYKQGGTADEFPLIFAGLQNGPDPSSINIGLNEKQIPPAGSNIMRIRMPAVTKALDAALAETNPAKRDARYQDVCKAT
NANLPWGTMWVANRYGVASSKLENFIWTPAPAGGPYQAHPEKWSILE
>Mature_527_residues
MRLRNFYSALALSAAVFAGPLYAAAPAMAAGTISGGFDVGPGGFQGNFNPLAATGGFTWLVTYFEPLVIYDDKLENIVGD
LAKSFEISPDQLTYTFKLAHAKWHDGEPFTSKDAKFTFDLARNGKTGSVFAARLASIASVETPDEKTVVIKLKEPSPSML
DTLTKVMMLPEHALASIPPEQLAKNAWWSSTPIGTGPFKFNKYVADQYVELTANPDYRGGRPQVDKLINRYFADPAAAIA
ALRSGEIQFTYVDSNDVSTFSSDSAFRVIEGDSFVVNYVGFNQEVPLWKDLKVRQAFMHAINRDAIIQSLYGGAAKPANC
VYVADRLVPKAIDAYAYDPQKARQLLDEAGWDKINGSKPITILTYYNSPLVANVLAAMQAMLAQVGINIVPRTVDTPTYN
SIVYKQGGTADEFPLIFAGLQNGPDPSSINIGLNEKQIPPAGSNIMRIRMPAVTKALDAALAETNPAKRDARYQDVCKAT
NANLPWGTMWVANRYGVASSKLENFIWTPAPAGGPYQAHPEKWSILE

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789966, Length=342, Percent_Identity=31.2865497076023, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1787052, Length=443, Percent_Identity=26.86230248307, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1789887, Length=539, Percent_Identity=23.3766233766234, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI1787551, Length=382, Percent_Identity=24.3455497382199, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1787762, Length=503, Percent_Identity=24.4532803180915, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1789397, Length=441, Percent_Identity=25.1700680272109, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 57393; Mature: 57393

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRNFYSALALSAAVFAGPLYAAAPAMAAGTISGGFDVGPGGFQGNFNPLAATGGFTWL
CCHHHHHHHHHHHHHHHHCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEE
VTYFEPLVIYDDKLENIVGDLAKSFEISPDQLTYTFKLAHAKWHDGEPFTSKDAKFTFDL
EEHHCCEEEECHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEE
ARNGKTGSVFAARLASIASVETPDEKTVVIKLKEPSPSMLDTLTKVMMLPEHALASIPPE
ECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHCCCHH
QLAKNAWWSSTPIGTGPFKFNKYVADQYVELTANPDYRGGRPQVDKLINRYFADPAAAIA
HHHHCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHH
ALRSGEIQFTYVDSNDVSTFSSDSAFRVIEGDSFVVNYVGFNQEVPLWKDLKVRQAFMHA
HHHCCCEEEEEECCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHH
INRDAIIQSLYGGAAKPANCVYVADRLVPKAIDAYAYDPQKARQLLDEAGWDKINGSKPI
HCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCE
TILTYYNSPLVANVLAAMQAMLAQVGINIVPRTVDTPTYNSIVYKQGGTADEFPLIFAGL
EEEEEECCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEC
QNGPDPSSINIGLNEKQIPPAGSNIMRIRMPAVTKALDAALAETNPAKRDARYQDVCKAT
CCCCCCCEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC
NANLPWGTMWVANRYGVASSKLENFIWTPAPAGGPYQAHPEKWSILE
CCCCCCCEEEEECCCCCCHHHHHHCEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLRNFYSALALSAAVFAGPLYAAAPAMAAGTISGGFDVGPGGFQGNFNPLAATGGFTWL
CCHHHHHHHHHHHHHHHHCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEE
VTYFEPLVIYDDKLENIVGDLAKSFEISPDQLTYTFKLAHAKWHDGEPFTSKDAKFTFDL
EEHHCCEEEECHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEE
ARNGKTGSVFAARLASIASVETPDEKTVVIKLKEPSPSMLDTLTKVMMLPEHALASIPPE
ECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHCCCHH
QLAKNAWWSSTPIGTGPFKFNKYVADQYVELTANPDYRGGRPQVDKLINRYFADPAAAIA
HHHHCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHH
ALRSGEIQFTYVDSNDVSTFSSDSAFRVIEGDSFVVNYVGFNQEVPLWKDLKVRQAFMHA
HHHCCCEEEEEECCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHH
INRDAIIQSLYGGAAKPANCVYVADRLVPKAIDAYAYDPQKARQLLDEAGWDKINGSKPI
HCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCE
TILTYYNSPLVANVLAAMQAMLAQVGINIVPRTVDTPTYNSIVYKQGGTADEFPLIFAGL
EEEEEECCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEC
QNGPDPSSINIGLNEKQIPPAGSNIMRIRMPAVTKALDAALAETNPAKRDARYQDVCKAT
CCCCCCCEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC
NANLPWGTMWVANRYGVASSKLENFIWTPAPAGGPYQAHPEKWSILE
CCCCCCCEEEEECCCCCCHHHHHHCEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA