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The map label for this gene is ygbK [C]

Identifier: 225686006

GI number: 225686006

Start: 139845

End: 141119

Strand: Reverse

Name: ygbK [C]

Synonym: BMEA_B0149

Alternate gene names: 225686006

Gene position: 141119-139845 (Counterclockwise)

Preceding gene: 225686007

Following gene: 225686005

Centisome position: 11.9

GC content: 57.18

Gene sequence:

>1275_bases
ATGCGCCTTGGCGTCATTGCAGACGATTTTACCGGAGCAACCGATATCGCAGGATTTCTGGTTGGCAACGGCCTGCGCAC
CATTCAGCTGAATGGCGTTCCAGCGGACGACCTTGCCGTGGATGCGGATGCGGTCGTCATCAGCCTGAAGGCCCGTTCCT
GCCCGACCGGGCAAGCAATTGCCGAAAGCCTCGCGGCGCTGAAATGGCTGCAAAAAAACAACTGCCAGCAATTTTTCTTC
AAATATTGCTCCACCTTCGACAGCACGCCAAAAGGCAATATCGGGCCTGTCACCGATGCATTGCTTGAGGCACTGGGTGA
AGAATTCACCGTCATCTGCCCTGCCCTGCCCGTCAATGGCCGTACCATCTATAATGGCTATCTGTTTGTGAACGGCGTTT
TGTTGAGCGAAACCGGGATGCGAAACCACCCCGTCACGCCCATGACCGACAGCAACATCATGCGGGTAATGGAATCCCAG
TCGCGCGGACGTGCAGGAAATATTTCCAGCACTATCGTCGATCAGGGCAGCGATGCAGTGCGCGACGCACTCAGGAAGCT
TCAGTCCGAAGGCATCCGCTATGCCGTCCTCGACGCCCTGAACGACCAGCATATAGAAACGCTTGGGCGTGCCGTATCGC
AAATGAAGCTGGTTACGGGCGGCTCGGGCCTTGCAGACGGGATGGCGCGCGCATGGACACAACTGCGCGGCAAGAATGTT
GCGGCGGCTGAAGCTGCCGGCGCGCCTGTGAAGGGACGCACGGTCATCCTCTCCGGTTCCTGCTCCCAGATGACCAATGC
GCAGGTGGCCGCATACAAGGCAAAGGCCCCCGCGCTGGCCATGGATGTCGAGAAGGCCATAAACGACGCGGCCTATATCG
ATGTTCTGGCCGAATGGGTGCTCGCACAGTCTGGCGATGCTTTGCCGCCGCTCGTTTATGCAACCATGCCGCCGGAAGCA
CTGAAAGCAGTGCAGGAGCGATTTGGTGGCGAACGTGCAAGCGCTGCCATCGAAGATTTGTTCGGGCAGCTTGCGAAACG
TCTCGAAGCCGAAGGGTTTACGCGATTCATTGTTGCAGGCGGAGAAACATCCGGGGCTGTGACACAGGCTTTGGCAATCG
ATGGGTTTACCATCGGGCCCCAGATTGCGCCCGGCGTTCCCTGGGTACGCGGGATCGGAAAACCATTATCGCTTGCACTG
AAATCCGGAAATTTCGGCACTGAGGCTTTCTTCTTTGAAGCCCAAAAGATTGCCAATCAGGAAGGAGATAAATAA

Upstream 100 bases:

>100_bases
CTGTTCGCCAATGCCTCGAATGCCGGCTTTGGCAAAGAAGATGATGCCGCCGTTATCAAGACATATGCCGGCATCAAACT
TCCCGACAGGAGTGCATGAC

Downstream 100 bases:

>100_bases
TGCCGCGTTTTGCTGCCAATCTGTCGACGATGTTTAACGAGGTGCCATTCCTCGAACGTTTTAGACTGGCTGCCGAAGCA
GGTTTTGGCGGCGTCGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MRLGVIADDFTGATDIAGFLVGNGLRTIQLNGVPADDLAVDADAVVISLKARSCPTGQAIAESLAALKWLQKNNCQQFFF
KYCSTFDSTPKGNIGPVTDALLEALGEEFTVICPALPVNGRTIYNGYLFVNGVLLSETGMRNHPVTPMTDSNIMRVMESQ
SRGRAGNISSTIVDQGSDAVRDALRKLQSEGIRYAVLDALNDQHIETLGRAVSQMKLVTGGSGLADGMARAWTQLRGKNV
AAAEAAGAPVKGRTVILSGSCSQMTNAQVAAYKAKAPALAMDVEKAINDAAYIDVLAEWVLAQSGDALPPLVYATMPPEA
LKAVQERFGGERASAAIEDLFGQLAKRLEAEGFTRFIVAGGETSGAVTQALAIDGFTIGPQIAPGVPWVRGIGKPLSLAL
KSGNFGTEAFFFEAQKIANQEGDK

Sequences:

>Translated_424_residues
MRLGVIADDFTGATDIAGFLVGNGLRTIQLNGVPADDLAVDADAVVISLKARSCPTGQAIAESLAALKWLQKNNCQQFFF
KYCSTFDSTPKGNIGPVTDALLEALGEEFTVICPALPVNGRTIYNGYLFVNGVLLSETGMRNHPVTPMTDSNIMRVMESQ
SRGRAGNISSTIVDQGSDAVRDALRKLQSEGIRYAVLDALNDQHIETLGRAVSQMKLVTGGSGLADGMARAWTQLRGKNV
AAAEAAGAPVKGRTVILSGSCSQMTNAQVAAYKAKAPALAMDVEKAINDAAYIDVLAEWVLAQSGDALPPLVYATMPPEA
LKAVQERFGGERASAAIEDLFGQLAKRLEAEGFTRFIVAGGETSGAVTQALAIDGFTIGPQIAPGVPWVRGIGKPLSLAL
KSGNFGTEAFFFEAQKIANQEGDK
>Mature_424_residues
MRLGVIADDFTGATDIAGFLVGNGLRTIQLNGVPADDLAVDADAVVISLKARSCPTGQAIAESLAALKWLQKNNCQQFFF
KYCSTFDSTPKGNIGPVTDALLEALGEEFTVICPALPVNGRTIYNGYLFVNGVLLSETGMRNHPVTPMTDSNIMRVMESQ
SRGRAGNISSTIVDQGSDAVRDALRKLQSEGIRYAVLDALNDQHIETLGRAVSQMKLVTGGSGLADGMARAWTQLRGKNV
AAAEAAGAPVKGRTVILSGSCSQMTNAQVAAYKAKAPALAMDVEKAINDAAYIDVLAEWVLAQSGDALPPLVYATMPPEA
LKAVQERFGGERASAAIEDLFGQLAKRLEAEGFTRFIVAGGETSGAVTQALAIDGFTIGPQIAPGVPWVRGIGKPLSLAL
KSGNFGTEAFFFEAQKIANQEGDK

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=387, Percent_Identity=60.4651162790698, Blast_Score=466, Evalue=1e-132,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 44672; Mature: 44672

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGVIADDFTGATDIAGFLVGNGLRTIQLNGVPADDLAVDADAVVISLKARSCPTGQAI
CCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCHHHEECCCEEEEEEECCCCCCHHHH
AESLAALKWLQKNNCQQFFFKYCSTFDSTPKGNIGPVTDALLEALGEEFTVICPALPVNG
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCC
RTIYNGYLFVNGVLLSETGMRNHPVTPMTDSNIMRVMESQSRGRAGNISSTIVDQGSDAV
EEEEECEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCHHH
RDALRKLQSEGIRYAVLDALNDQHIETLGRAVSQMKLVTGGSGLADGMARAWTQLRGKNV
HHHHHHHHHCCCEEEEHHHCCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCC
AAAEAAGAPVKGRTVILSGSCSQMTNAQVAAYKAKAPALAMDVEKAINDAAYIDVLAEWV
CHHHHCCCCCCCCEEEEECCCCHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LAQSGDALPPLVYATMPPEALKAVQERFGGERASAAIEDLFGQLAKRLEAEGFTRFIVAG
HHCCCCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
GETSGAVTQALAIDGFTIGPQIAPGVPWVRGIGKPLSLALKSGNFGTEAFFFEAQKIANQ
CCCCCHHHHHHEECCEEECCCCCCCCCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCC
EGDK
CCCC
>Mature Secondary Structure
MRLGVIADDFTGATDIAGFLVGNGLRTIQLNGVPADDLAVDADAVVISLKARSCPTGQAI
CCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCHHHEECCCEEEEEEECCCCCCHHHH
AESLAALKWLQKNNCQQFFFKYCSTFDSTPKGNIGPVTDALLEALGEEFTVICPALPVNG
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCC
RTIYNGYLFVNGVLLSETGMRNHPVTPMTDSNIMRVMESQSRGRAGNISSTIVDQGSDAV
EEEEECEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCHHH
RDALRKLQSEGIRYAVLDALNDQHIETLGRAVSQMKLVTGGSGLADGMARAWTQLRGKNV
HHHHHHHHHCCCEEEEHHHCCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCC
AAAEAAGAPVKGRTVILSGSCSQMTNAQVAAYKAKAPALAMDVEKAINDAAYIDVLAEWV
CHHHHCCCCCCCCEEEEECCCCHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LAQSGDALPPLVYATMPPEALKAVQERFGGERASAAIEDLFGQLAKRLEAEGFTRFIVAG
HHCCCCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
GETSGAVTQALAIDGFTIGPQIAPGVPWVRGIGKPLSLALKSGNFGTEAFFFEAQKIANQ
CCCCCHHHHHHEECCEEECCCCCCCCCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCC
EGDK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]