Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
---|---|
Accession | NC_012442 |
Length | 1,185,518 |
Click here to switch to the map view.
The map label for this gene is gatA [H]
Identifier: 225685963
GI number: 225685963
Start: 95739
End: 96944
Strand: Reverse
Name: gatA [H]
Synonym: BMEA_B0101
Alternate gene names: 225685963
Gene position: 96944-95739 (Counterclockwise)
Preceding gene: 225685965
Following gene: 225685962
Centisome position: 8.18
GC content: 60.36
Gene sequence:
>1206_bases ATGGCCAATCTTGATCCTTTCAATGCCCTCATTGCCAAACCTGAAAAACCCCTTGCCCATGCCGCAAGCGGCCCGCTTGC AGGTGAAAGGCTGGCGGTCAAGGACATTTATGACATTGCCGGAATGGTGACCGGATGCGGAAATCCACAAATTCTGGCCG AATCACCCGTCGCCCGGAAATCCGCCCCAGTGGTGGAAAAACTGCTTGCGGCCGGCGCCGAATTCATCGGCAAGGCGCAG ACGGATGAAGTGGCTTTTTCCATGATGGGCCAGAATTCGCATTACCCCTATCCGATCAATCCGGCGGCCCCTGATCGCGT CACTGGCGGCTCCTCATCCGGTTCGGCTGCGGCAGTCGCGGGAAAGCTTGCCGATATCGCGCTCGGCTCGGACACGGGCG GCTCCATCCGCACGCCTGCAAGCTTTTGCGGGCTGATTGGCCTGCGCTCCACCCATGGCCGCATTCCGCTCGAAGGCATC ATGCCGCTTGCGCCTTCGCTGGATACTATCGGCTGGTTCGCACGCGATATTGCGCTTTATGAAAAGGTGGGCGCGGTCCT GCTTGGCGACGACGCACAGGAATTCAAGCTGACCCAGCTTCTCTATATGCCGGTTTTGGAACAGCTCTTGCTGGGGCAAG CTGAAACCGATGCCTACCGCGCCATGTTTGCCAAGGTGCGCCCGCATTTTGCAACTCTCAAGGCGGCAAGCCAGCCGACG CTTTCCATCGATGAACTGTATCTCGCCTTCCGCCAGATACAGGGCGCGGAAGCATGGGAAAACCATGGCGCATGGATTTC CTCCGGCAATCGCCAGCTTGGCCCCGGTATTGCCGACCGCTTCGCTTACGGTGCCGAAATGACCGCCGATATGGTCAAAA ACCAGCGCGCAAGGCGCGCCCGCTTCGCGGAAGAATTTGAGGCCATTATCGGCGAAAGCGCCGTTCTGGCGCTGCCAACC GTGCCGGGCGCGGCCCCGCTCACCGGCGAACCTTTCGAGGCATTGCAGGCCTATCGCGAACAGGCCCTGCGCCTGCTCTG CCTTTCGGGGCTTTCGGGCCTGCCACAGATTACATTACCCCTGGGATCATTGAGGCCGGGCGGCACGATGTATGACGCAC CCTTTGGCATTTCCTTCATCGGACCACGCGGCAGCGACCGGACGCTGATCGCGCTGGCTCAAACCATCATCAGCGAGCGG AGTTAG
Upstream 100 bases:
>100_bases ACCCTATGCTTGCCATTGTTCAATATAAGTGAAACATTTCGATGTGGGACTTCCGTTCTGACGCCCCAAAAAACCTTTTA TTTATCGCATGTTGTGAACA
Downstream 100 bases:
>100_bases ACCATGGACACGCTGACACGCATGCGCGCCTTCATCGACGTGGTCGAGGCGGAAGGCTTTTCCGCCGCAGCGCGCAAGAT CGGGCGGTCCAAGGCACTTC
Product: amidase
Products: monocarboxylate; NH3
Alternate protein names: Glu-ADT subunit A [H]
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MANLDPFNALIAKPEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGI MPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQEFKLTQLLYMPVLEQLLLGQAETDAYRAMFAKVRPHFATLKAASQPT LSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPT VPGAAPLTGEPFEALQAYREQALRLLCLSGLSGLPQITLPLGSLRPGGTMYDAPFGISFIGPRGSDRTLIALAQTIISER S
Sequences:
>Translated_401_residues MANLDPFNALIAKPEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGI MPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQEFKLTQLLYMPVLEQLLLGQAETDAYRAMFAKVRPHFATLKAASQPT LSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPT VPGAAPLTGEPFEALQAYREQALRLLCLSGLSGLPQITLPLGSLRPGGTMYDAPFGISFIGPRGSDRTLIALAQTIISER S >Mature_400_residues ANLDPFNALIAKPEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQT DEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIM PLAPSLDTIGWFARDIALYEKVGAVLLGDDAQEFKLTQLLYMPVLEQLLLGQAETDAYRAMFAKVRPHFATLKAASQPTL SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTV PGAAPLTGEPFEALQAYREQALRLLCLSGLSGLPQITLPLGSLRPGGTMYDAPFGISFIGPRGSDRTLIALAQTIISERS
Specific function: Furnishes a means for formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu- tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activa
COG id: COG0154
COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amidase family [H]
Homologues:
Organism=Homo sapiens, GI195972892, Length=414, Percent_Identity=24.3961352657005, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI222831590, Length=174, Percent_Identity=35.0574712643678, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17543272, Length=413, Percent_Identity=25.181598062954, Blast_Score=98, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17537465, Length=415, Percent_Identity=26.5060240963855, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71990152, Length=131, Percent_Identity=35.1145038167939, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323950, Length=442, Percent_Identity=26.0180995475113, Blast_Score=83, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6319685, Length=169, Percent_Identity=39.0532544378698, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24648113, Length=159, Percent_Identity=38.3647798742138, Blast_Score=79, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000120 - InterPro: IPR020556 - InterPro: IPR004412 [H]
Pfam domain/function: PF01425 Amidase [H]
EC number: 3.5.1.4
Molecular weight: Translated: 42345; Mature: 42214
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS00571 AMIDASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLDPFNALIAKPEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARK CCCCCCHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC SAPVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVA CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH GKLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALY HHHHHEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHH EKVGAVLLGDDAQEFKLTQLLYMPVLEQLLLGQAETDAYRAMFAKVRPHFATLKAASQPT HHHCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHCCCCCC LSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQRARRA CHHHHHHHHHHHHCCCHHHHHCCCEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH RFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLLCLSGLSGLPQITLP HHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LGSLRPGGTMYDAPFGISFIGPRGSDRTLIALAQTIISERS CCCCCCCCCEEECCCCEEEECCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure ANLDPFNALIAKPEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARK CCCCCHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC SAPVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVA CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH GKLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALY HHHHHEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHH EKVGAVLLGDDAQEFKLTQLLYMPVLEQLLLGQAETDAYRAMFAKVRPHFATLKAASQPT HHHCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHCCCCCC LSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQRARRA CHHHHHHHHHHHHCCCHHHHHCCCEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH RFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLLCLSGLSGLPQITLP HHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LGSLRPGGTMYDAPFGISFIGPRGSDRTLIALAQTIISERS CCCCCCCCCEEECCCCEEEECCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: monocarboxylic acid amide; H2O
Specific reaction: A monocarboxylic acid amide + H2O = a monocarboxylate + NH3
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA