Definition Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence.
Accession NC_012442
Length 1,185,518

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The map label for this gene is gatA [H]

Identifier: 225685963

GI number: 225685963

Start: 95739

End: 96944

Strand: Reverse

Name: gatA [H]

Synonym: BMEA_B0101

Alternate gene names: 225685963

Gene position: 96944-95739 (Counterclockwise)

Preceding gene: 225685965

Following gene: 225685962

Centisome position: 8.18

GC content: 60.36

Gene sequence:

>1206_bases
ATGGCCAATCTTGATCCTTTCAATGCCCTCATTGCCAAACCTGAAAAACCCCTTGCCCATGCCGCAAGCGGCCCGCTTGC
AGGTGAAAGGCTGGCGGTCAAGGACATTTATGACATTGCCGGAATGGTGACCGGATGCGGAAATCCACAAATTCTGGCCG
AATCACCCGTCGCCCGGAAATCCGCCCCAGTGGTGGAAAAACTGCTTGCGGCCGGCGCCGAATTCATCGGCAAGGCGCAG
ACGGATGAAGTGGCTTTTTCCATGATGGGCCAGAATTCGCATTACCCCTATCCGATCAATCCGGCGGCCCCTGATCGCGT
CACTGGCGGCTCCTCATCCGGTTCGGCTGCGGCAGTCGCGGGAAAGCTTGCCGATATCGCGCTCGGCTCGGACACGGGCG
GCTCCATCCGCACGCCTGCAAGCTTTTGCGGGCTGATTGGCCTGCGCTCCACCCATGGCCGCATTCCGCTCGAAGGCATC
ATGCCGCTTGCGCCTTCGCTGGATACTATCGGCTGGTTCGCACGCGATATTGCGCTTTATGAAAAGGTGGGCGCGGTCCT
GCTTGGCGACGACGCACAGGAATTCAAGCTGACCCAGCTTCTCTATATGCCGGTTTTGGAACAGCTCTTGCTGGGGCAAG
CTGAAACCGATGCCTACCGCGCCATGTTTGCCAAGGTGCGCCCGCATTTTGCAACTCTCAAGGCGGCAAGCCAGCCGACG
CTTTCCATCGATGAACTGTATCTCGCCTTCCGCCAGATACAGGGCGCGGAAGCATGGGAAAACCATGGCGCATGGATTTC
CTCCGGCAATCGCCAGCTTGGCCCCGGTATTGCCGACCGCTTCGCTTACGGTGCCGAAATGACCGCCGATATGGTCAAAA
ACCAGCGCGCAAGGCGCGCCCGCTTCGCGGAAGAATTTGAGGCCATTATCGGCGAAAGCGCCGTTCTGGCGCTGCCAACC
GTGCCGGGCGCGGCCCCGCTCACCGGCGAACCTTTCGAGGCATTGCAGGCCTATCGCGAACAGGCCCTGCGCCTGCTCTG
CCTTTCGGGGCTTTCGGGCCTGCCACAGATTACATTACCCCTGGGATCATTGAGGCCGGGCGGCACGATGTATGACGCAC
CCTTTGGCATTTCCTTCATCGGACCACGCGGCAGCGACCGGACGCTGATCGCGCTGGCTCAAACCATCATCAGCGAGCGG
AGTTAG

Upstream 100 bases:

>100_bases
ACCCTATGCTTGCCATTGTTCAATATAAGTGAAACATTTCGATGTGGGACTTCCGTTCTGACGCCCCAAAAAACCTTTTA
TTTATCGCATGTTGTGAACA

Downstream 100 bases:

>100_bases
ACCATGGACACGCTGACACGCATGCGCGCCTTCATCGACGTGGTCGAGGCGGAAGGCTTTTCCGCCGCAGCGCGCAAGAT
CGGGCGGTCCAAGGCACTTC

Product: amidase

Products: monocarboxylate; NH3

Alternate protein names: Glu-ADT subunit A [H]

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MANLDPFNALIAKPEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ
TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGI
MPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQEFKLTQLLYMPVLEQLLLGQAETDAYRAMFAKVRPHFATLKAASQPT
LSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPT
VPGAAPLTGEPFEALQAYREQALRLLCLSGLSGLPQITLPLGSLRPGGTMYDAPFGISFIGPRGSDRTLIALAQTIISER
S

Sequences:

>Translated_401_residues
MANLDPFNALIAKPEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ
TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGI
MPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQEFKLTQLLYMPVLEQLLLGQAETDAYRAMFAKVRPHFATLKAASQPT
LSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPT
VPGAAPLTGEPFEALQAYREQALRLLCLSGLSGLPQITLPLGSLRPGGTMYDAPFGISFIGPRGSDRTLIALAQTIISER
S
>Mature_400_residues
ANLDPFNALIAKPEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQT
DEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIM
PLAPSLDTIGWFARDIALYEKVGAVLLGDDAQEFKLTQLLYMPVLEQLLLGQAETDAYRAMFAKVRPHFATLKAASQPTL
SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTV
PGAAPLTGEPFEALQAYREQALRLLCLSGLSGLPQITLPLGSLRPGGTMYDAPFGISFIGPRGSDRTLIALAQTIISERS

Specific function: Furnishes a means for formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu- tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activa

COG id: COG0154

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amidase family [H]

Homologues:

Organism=Homo sapiens, GI195972892, Length=414, Percent_Identity=24.3961352657005, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI222831590, Length=174, Percent_Identity=35.0574712643678, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17543272, Length=413, Percent_Identity=25.181598062954, Blast_Score=98, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17537465, Length=415, Percent_Identity=26.5060240963855, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71990152, Length=131, Percent_Identity=35.1145038167939, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323950, Length=442, Percent_Identity=26.0180995475113, Blast_Score=83, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6319685, Length=169, Percent_Identity=39.0532544378698, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24648113, Length=159, Percent_Identity=38.3647798742138, Blast_Score=79, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000120
- InterPro:   IPR020556
- InterPro:   IPR004412 [H]

Pfam domain/function: PF01425 Amidase [H]

EC number: 3.5.1.4

Molecular weight: Translated: 42345; Mature: 42214

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS00571 AMIDASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLDPFNALIAKPEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARK
CCCCCCHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC
SAPVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVA
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
GKLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALY
HHHHHEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHH
EKVGAVLLGDDAQEFKLTQLLYMPVLEQLLLGQAETDAYRAMFAKVRPHFATLKAASQPT
HHHCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHCCCCCC
LSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQRARRA
CHHHHHHHHHHHHCCCHHHHHCCCEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
RFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLLCLSGLSGLPQITLP
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
LGSLRPGGTMYDAPFGISFIGPRGSDRTLIALAQTIISERS
CCCCCCCCCEEECCCCEEEECCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANLDPFNALIAKPEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARK
CCCCCHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC
SAPVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVA
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
GKLADIALGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALY
HHHHHEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHH
EKVGAVLLGDDAQEFKLTQLLYMPVLEQLLLGQAETDAYRAMFAKVRPHFATLKAASQPT
HHHCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHCCCCCC
LSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQRARRA
CHHHHHHHHHHHHCCCHHHHHCCCEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
RFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLLCLSGLSGLPQITLP
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
LGSLRPGGTMYDAPFGISFIGPRGSDRTLIALAQTIISERS
CCCCCCCCCEEECCCCEEEECCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: monocarboxylic acid amide; H2O

Specific reaction: A monocarboxylic acid amide + H2O = a monocarboxylate + NH3

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA