Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
---|---|
Accession | NC_012442 |
Length | 1,185,518 |
Click here to switch to the map view.
The map label for this gene is exoP [H]
Identifier: 225685965
GI number: 225685965
Start: 98738
End: 100456
Strand: Reverse
Name: exoP [H]
Synonym: BMEA_B0104
Alternate gene names: 225685965
Gene position: 100456-98738 (Counterclockwise)
Preceding gene: 225685966
Following gene: 225685963
Centisome position: 8.47
GC content: 59.63
Gene sequence:
>1719_bases ATGGACGGTGAAGACAAGCGCAAATCAGGAAGCGAAGGCAAGCCCCTTCTCGCATTTTCGGATGCGCCTGTCAGCGACAG CAAGAAATCCCGTTCCACGGAGGATCAGGCTTCGCCGACACCGCCATGGACGCCGCCTGCGAGCCCGCGGGAGCGAGCGC AATATTACCGTTCACACCAAAGCGCTTCCAGCGCACTGACGGATGAAGAAATTGCCGGACTTCGCGAAATCGGTCGCGAT GCCGCCTCAAGCGAAGACAAGGCTTCACCTTCCGATAAGGAACAGCCCGCCAGCGATGCCGATGAAAACTGGCCGCGCCG TTCCAATGCCGCGCAGGATGCGGAATGGAAGCCTTTGATCGATCCGCGCATTGCGATCGATGTCATCCGGGGTTCCAGGC GGCTGTTGCTCCCCACGACGATATTTGGCGGTATTGTAGCAACCCTTTATGCCCTCTCGCTGCCGCAGACCTATATTGCC AGTACGGACATTCTCGTCGATCCGCGCAATATCAAGGTGGTCGGAACGGAACTGACGCCGGGGCAATTGCCCACAGACGC CTCTCTGGCCGTTGCGGAGAGCCAGGCGCGCATGATCGATTCCAGCAGTGTCCTGCTGAAAGTGATCAACAAGGCTCATC TCATTCAGGACCCGGAGTTTAACGGCACGCTCGTTCCCACCGGGATCGTAGGGTTTTTCGCGCAGCTGAAAGACCTGATC GGCAAGAAAGAGCAGAGCGACAGCCAGACGATGGAAACGCGCGTCCTCGACAATCTGCGTAAAAGCCTGACCATCCACCG CGATGCCAAGACCTTCATCTATTCGATTTCGGTCACAACACGCGAAGCGAACAAGTCGGCCTCACTCGCCAATGAGATCA GCTCGGTTTTTCAGGATGAACTTGCGTCTTTGCAGTCGGATGCGGCACGGCGCACCTCGGAAGAACTTTTCCAGCGGCTG GCGGACCTGCGCGCCAGTGTGGAAGGTGCTGAAAAAGCGGTTGCCGATTTTCGCGCGACACACGACCTCATCGACGTGGA CGGCAGGCTTATCAGCAATAATGAACTGGGCCGCCTGAACGAGCAGCTTACCAACCAGCGCGCCGAAACCGTGCGGCTGC AAGCCCGTATCAATGTGCTGAAGGACACCACACCGGACAGCGTGGTGGCGGGCACATTGCCGGAAGACCTGCGCTCCAAC ACGTTGACGGCCTTGCGCGCGCAATATGCGCAGGCGCGACAGGCGGCAAACGGCATGGCGACCCGGCTTGGTCCGCGCCA TCCGCAGCTTATCCAGCTCAACTCGCAGGCCAATGCCGTATTGAACGACATCAGTGCAGAATTGCAGCGCGTGCGTTCCT CGCTACAGGTGGAGGTTCAGCGCTCGCAACAACAGGAAACGGCACTGAGCGCCCGTCTGGCGCAGTTGAAGGCGCGGCAG GCGAACGACGCAAAAGACCTCGTAAAACTGCGCGAACTGGAGCGGGAAGCTGCCGCGCGGCGCTCGATCTATGAAGCGTT CCTGCTGCGCTCACGCGAGACAAGCGAACAGGAAGGCCTCAATACGGTCAATATACGTGTGCTTTCGGCGGCCCGCCCGC CGCTGGAACCAGCCGGATCCACACGCAAGCTCATCGTCATCGCCGGCCTGATCGCGGGCTTCCTTGCAGGGCTTGCCATC ACAATCATCCGCAATTTCGGGCGGTTGCTGCGCCTGTAG
Upstream 100 bases:
>100_bases CAAGTTTCCCTGTACAGCACAGCATATTTTAACCATTTGTTTTCTATAAAAAAATATAGTCACGCCTCGTCATGGTATTC TTAAAAGCACGGAAGTTATG
Downstream 100 bases:
>100_bases AGCATTTTCGAGCCAAAAGTGCGAAACGCCTACGCATAGTTAGAGGGTTCCATTAAAACAGGAACCCTCTAAAGATCAGA TGACATAGGATCGCAACGGT
Product: lipopolysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 572; Mature: 572
Protein sequence:
>572_residues MDGEDKRKSGSEGKPLLAFSDAPVSDSKKSRSTEDQASPTPPWTPPASPRERAQYYRSHQSASSALTDEEIAGLREIGRD AASSEDKASPSDKEQPASDADENWPRRSNAAQDAEWKPLIDPRIAIDVIRGSRRLLLPTTIFGGIVATLYALSLPQTYIA STDILVDPRNIKVVGTELTPGQLPTDASLAVAESQARMIDSSSVLLKVINKAHLIQDPEFNGTLVPTGIVGFFAQLKDLI GKKEQSDSQTMETRVLDNLRKSLTIHRDAKTFIYSISVTTREANKSASLANEISSVFQDELASLQSDAARRTSEELFQRL ADLRASVEGAEKAVADFRATHDLIDVDGRLISNNELGRLNEQLTNQRAETVRLQARINVLKDTTPDSVVAGTLPEDLRSN TLTALRAQYAQARQAANGMATRLGPRHPQLIQLNSQANAVLNDISAELQRVRSSLQVEVQRSQQQETALSARLAQLKARQ ANDAKDLVKLRELEREAAARRSIYEAFLLRSRETSEQEGLNTVNIRVLSAARPPLEPAGSTRKLIVIAGLIAGFLAGLAI TIIRNFGRLLRL
Sequences:
>Translated_572_residues MDGEDKRKSGSEGKPLLAFSDAPVSDSKKSRSTEDQASPTPPWTPPASPRERAQYYRSHQSASSALTDEEIAGLREIGRD AASSEDKASPSDKEQPASDADENWPRRSNAAQDAEWKPLIDPRIAIDVIRGSRRLLLPTTIFGGIVATLYALSLPQTYIA STDILVDPRNIKVVGTELTPGQLPTDASLAVAESQARMIDSSSVLLKVINKAHLIQDPEFNGTLVPTGIVGFFAQLKDLI GKKEQSDSQTMETRVLDNLRKSLTIHRDAKTFIYSISVTTREANKSASLANEISSVFQDELASLQSDAARRTSEELFQRL ADLRASVEGAEKAVADFRATHDLIDVDGRLISNNELGRLNEQLTNQRAETVRLQARINVLKDTTPDSVVAGTLPEDLRSN TLTALRAQYAQARQAANGMATRLGPRHPQLIQLNSQANAVLNDISAELQRVRSSLQVEVQRSQQQETALSARLAQLKARQ ANDAKDLVKLRELEREAAARRSIYEAFLLRSRETSEQEGLNTVNIRVLSAARPPLEPAGSTRKLIVIAGLIAGFLAGLAI TIIRNFGRLLRL >Mature_572_residues MDGEDKRKSGSEGKPLLAFSDAPVSDSKKSRSTEDQASPTPPWTPPASPRERAQYYRSHQSASSALTDEEIAGLREIGRD AASSEDKASPSDKEQPASDADENWPRRSNAAQDAEWKPLIDPRIAIDVIRGSRRLLLPTTIFGGIVATLYALSLPQTYIA STDILVDPRNIKVVGTELTPGQLPTDASLAVAESQARMIDSSSVLLKVINKAHLIQDPEFNGTLVPTGIVGFFAQLKDLI GKKEQSDSQTMETRVLDNLRKSLTIHRDAKTFIYSISVTTREANKSASLANEISSVFQDELASLQSDAARRTSEELFQRL ADLRASVEGAEKAVADFRATHDLIDVDGRLISNNELGRLNEQLTNQRAETVRLQARINVLKDTTPDSVVAGTLPEDLRSN TLTALRAQYAQARQAANGMATRLGPRHPQLIQLNSQANAVLNDISAELQRVRSSLQVEVQRSQQQETALSARLAQLKARQ ANDAKDLVKLRELEREAAARRSIYEAFLLRSRETSEQEGLNTVNIRVLSAARPPLEPAGSTRKLIVIAGLIAGFLAGLAI TIIRNFGRLLRL
Specific function: Unknown
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.solanacearum epsB [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR005700 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: NA
Molecular weight: Translated: 62613; Mature: 62613
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGEDKRKSGSEGKPLLAFSDAPVSDSKKSRSTEDQASPTPPWTPPASPRERAQYYRSHQ CCCCCCCCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH SASSALTDEEIAGLREIGRDAASSEDKASPSDKEQPASDADENWPRRSNAAQDAEWKPLI HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DPRIAIDVIRGSRRLLLPTTIFGGIVATLYALSLPQTYIASTDILVDPRNIKVVGTELTP CCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHCCCCEEECCCCEEEEECCCCC GQLPTDASLAVAESQARMIDSSSVLLKVINKAHLIQDPEFNGTLVPTGIVGFFAQLKDLI CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHH GKKEQSDSQTMETRVLDNLRKSLTIHRDAKTFIYSISVTTREANKSASLANEISSVFQDE CCCCCCHHHHHHHHHHHHHHHHHEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHH LASLQSDAARRTSEELFQRLADLRASVEGAEKAVADFRATHDLIDVDGRLISNNELGRLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHH EQLTNQRAETVRLQARINVLKDTTPDSVVAGTLPEDLRSNTLTALRAQYAQARQAANGMA HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHH TRLGPRHPQLIQLNSQANAVLNDISAELQRVRSSLQVEVQRSQQQETALSARLAQLKARQ HHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ANDAKDLVKLRELEREAAARRSIYEAFLLRSRETSEQEGLNTVNIRVLSAARPPLEPAGS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEEECCCCCCCCCCC TRKLIVIAGLIAGFLAGLAITIIRNFGRLLRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDGEDKRKSGSEGKPLLAFSDAPVSDSKKSRSTEDQASPTPPWTPPASPRERAQYYRSHQ CCCCCCCCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH SASSALTDEEIAGLREIGRDAASSEDKASPSDKEQPASDADENWPRRSNAAQDAEWKPLI HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DPRIAIDVIRGSRRLLLPTTIFGGIVATLYALSLPQTYIASTDILVDPRNIKVVGTELTP CCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHCCCCEEECCCCEEEEECCCCC GQLPTDASLAVAESQARMIDSSSVLLKVINKAHLIQDPEFNGTLVPTGIVGFFAQLKDLI CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHH GKKEQSDSQTMETRVLDNLRKSLTIHRDAKTFIYSISVTTREANKSASLANEISSVFQDE CCCCCCHHHHHHHHHHHHHHHHHEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHH LASLQSDAARRTSEELFQRLADLRASVEGAEKAVADFRATHDLIDVDGRLISNNELGRLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHH EQLTNQRAETVRLQARINVLKDTTPDSVVAGTLPEDLRSNTLTALRAQYAQARQAANGMA HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHH TRLGPRHPQLIQLNSQANAVLNDISAELQRVRSSLQVEVQRSQQQETALSARLAQLKARQ HHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ANDAKDLVKLRELEREAAARRSIYEAFLLRSRETSEQEGLNTVNIRVLSAARPPLEPAGS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEEECCCCCCCCCCC TRKLIVIAGLIAGFLAGLAITIIRNFGRLLRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8226645; 8226646; 8246891; 11481431 [H]