Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
---|---|
Accession | NC_012442 |
Length | 1,185,518 |
Click here to switch to the map view.
The map label for this gene is zraR [H]
Identifier: 225685948
GI number: 225685948
Start: 82035
End: 83525
Strand: Direct
Name: zraR [H]
Synonym: BMEA_B0086
Alternate gene names: 225685948
Gene position: 82035-83525 (Clockwise)
Preceding gene: 225685940
Following gene: 225685949
Centisome position: 6.92
GC content: 59.56
Gene sequence:
>1491_bases ATGGCAACGCGCATTCTCATAGCGGATGACGATCCGATTCAGCGACGCAATCTCGAAGCAATAGTCATGCGCATGGGTTA TCGCACGATCCTTGCCGATGGCGGGGTAAGTGCGCTGGGCTTCATAAGCCAGCGCAAGGATATCGTGCTGGTGCTGCTGG ACCTCACCATGCCGGATATGGACGGCCTCACCGTTTTGTCGCGGATGCGCGCGGCCGGGGTGGCGGTGCCGGTTATCGTG CTGGTGCATAGCGATGACATGCATCGCGTTGCGCAGGCCATCAGGCTTGGCGCGGCGGATTTCATGATAAAGCCGCTGAT TTTCGAGCGTGTTCAGGTTTCCGTTGCAAATGTGTTGAAACTCGACGCGCTGACACATGAGATACAGCGTGCCCGTTCTT CCCCGAGGGTGCATCTTTCGCTTTCGGAAATGGTGGCAAAAAGCCCTGAAATGGAGCGGGTGATGGTTCTGGCGCGCCGC GCGGCGGCGCTGGATGCCCCGCTTCTGGTCGAAGGCGAGACTGGCAGCGGCAGGCAAACGCTTGCGCGCGCCATTTGCGG TGGCGGGTCGCGCTGGCGCGGCCCCTTCGTTTCACTCGACTGTCGCGGGCTTACGATGGAAAATGCCGACGATATCCTGT TCGGCACTGCGAAGTTCTGCCCGGATGATCCGATCGTCAGCGCCGGTAAACTGGCGGAAGCCGATGGCGGCGTCCTGTTT CTGGATGAAGTCGGCGCATTGCCGCACCACGCGCAGCTTCGGTTATTTACCGCCATGCAGTCGGGCCAGTATGAATCGAA CGGTTCGCGGGTGACGTCCAATGCCCGCATCATGACTTCCAGCAGCCAGCCGCTGGTCGATTTCGTTCATATGGGGCGTT TTCATGCCGGGCTTTATCATCTGCTCGGCTCCTTTTCCATCGCAATGCCGCCCTTGCGGGAGCGCGTGGAGGATATTTCC ATTCTCGTGCACCAGTTTGCGGTGCGCTTTGCCAGCGAGGAGCGGCTGAGCCACATCACCGGCATTGCGCCGCATCTGCT GGAACGGCTGAAGGCCTATCAGTGGCCCGGCAATGTGCGTGAATTGAAGAATGCTGTTTATCGTGCGGTTCTGCTCTGCG ACAAAAGCGAACTGACGGTCGAGGATTTTGCGCAGCTTAATCTTGGTGCCGCCGGTTTTGCCGGGGCGCAGGCGATGTGG CAGAAACCGGCCGCTCCCTTATCGGTCGGGCGCGCGGGCACTGCCTTCAGCGGCATTGATGCCGATGGCGAAGTGCGCAC CCTTGCTGCTGCCGAGGAAGAAATGATCCGCTTTGCGATTGCACATTACGACGGGCAAATCAGCGAGGTTGCGCGCCGTC TGGGCATTGGCAGGACCACGCTTTACCGCAAGCTGAAAGAATATGGCATCGATGTGGCGTCGATTTCCGGCAAGGGCAAA GAGAGCGATCTTGAGAATGAAAGCTGCTCATGGGGCCGCGCGGCCATATAG
Upstream 100 bases:
>100_bases AGTGGACACTTCGCTCAAATAATGTGCTTGGTATATCAGGAAACCGATATGTTCCTATATATCACGGCGCGGCAACATCA ACGGTTGATAAAAGCAATTT
Downstream 100 bases:
>100_bases GCTGGACAATATAAGTCCATGAATTTTATGCGCTTCCCATATTTTGCCTGTTTTTGCTGCCAGGATGTGTCCCAATCGCA AGTCTGTTAATAAAATCTTT
Product: two component, sigma54 specific, transcriptional regulator, Fis family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MATRILIADDDPIQRRNLEAIVMRMGYRTILADGGVSALGFISQRKDIVLVLLDLTMPDMDGLTVLSRMRAAGVAVPVIV LVHSDDMHRVAQAIRLGAADFMIKPLIFERVQVSVANVLKLDALTHEIQRARSSPRVHLSLSEMVAKSPEMERVMVLARR AAALDAPLLVEGETGSGRQTLARAICGGGSRWRGPFVSLDCRGLTMENADDILFGTAKFCPDDPIVSAGKLAEADGGVLF LDEVGALPHHAQLRLFTAMQSGQYESNGSRVTSNARIMTSSSQPLVDFVHMGRFHAGLYHLLGSFSIAMPPLRERVEDIS ILVHQFAVRFASEERLSHITGIAPHLLERLKAYQWPGNVRELKNAVYRAVLLCDKSELTVEDFAQLNLGAAGFAGAQAMW QKPAAPLSVGRAGTAFSGIDADGEVRTLAAAEEEMIRFAIAHYDGQISEVARRLGIGRTTLYRKLKEYGIDVASISGKGK ESDLENESCSWGRAAI
Sequences:
>Translated_496_residues MATRILIADDDPIQRRNLEAIVMRMGYRTILADGGVSALGFISQRKDIVLVLLDLTMPDMDGLTVLSRMRAAGVAVPVIV LVHSDDMHRVAQAIRLGAADFMIKPLIFERVQVSVANVLKLDALTHEIQRARSSPRVHLSLSEMVAKSPEMERVMVLARR AAALDAPLLVEGETGSGRQTLARAICGGGSRWRGPFVSLDCRGLTMENADDILFGTAKFCPDDPIVSAGKLAEADGGVLF LDEVGALPHHAQLRLFTAMQSGQYESNGSRVTSNARIMTSSSQPLVDFVHMGRFHAGLYHLLGSFSIAMPPLRERVEDIS ILVHQFAVRFASEERLSHITGIAPHLLERLKAYQWPGNVRELKNAVYRAVLLCDKSELTVEDFAQLNLGAAGFAGAQAMW QKPAAPLSVGRAGTAFSGIDADGEVRTLAAAEEEMIRFAIAHYDGQISEVARRLGIGRTTLYRKLKEYGIDVASISGKGK ESDLENESCSWGRAAI >Mature_495_residues ATRILIADDDPIQRRNLEAIVMRMGYRTILADGGVSALGFISQRKDIVLVLLDLTMPDMDGLTVLSRMRAAGVAVPVIVL VHSDDMHRVAQAIRLGAADFMIKPLIFERVQVSVANVLKLDALTHEIQRARSSPRVHLSLSEMVAKSPEMERVMVLARRA AALDAPLLVEGETGSGRQTLARAICGGGSRWRGPFVSLDCRGLTMENADDILFGTAKFCPDDPIVSAGKLAEADGGVLFL DEVGALPHHAQLRLFTAMQSGQYESNGSRVTSNARIMTSSSQPLVDFVHMGRFHAGLYHLLGSFSIAMPPLRERVEDISI LVHQFAVRFASEERLSHITGIAPHLLERLKAYQWPGNVRELKNAVYRAVLLCDKSELTVEDFAQLNLGAAGFAGAQAMWQ KPAAPLSVGRAGTAFSGIDADGEVRTLAAAEEEMIRFAIAHYDGQISEVARRLGIGRTTLYRKLKEYGIDVASISGKGKE SDLENESCSWGRAAI
Specific function: Member of the two-component regulatory system zraS/zraR. When activated by zraS it acts in conjunction with sigma-54 to regulate the expression of zraP. Positively autoregulates the expression of the zraSR operon [H]
COG id: COG2204
COG function: function code T; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 sigma-54 factor interaction domain [H]
Homologues:
Organism=Escherichia coli, GI1790437, Length=465, Percent_Identity=33.7634408602151, Blast_Score=229, Evalue=4e-61, Organism=Escherichia coli, GI1788550, Length=478, Percent_Identity=30.1255230125523, Blast_Score=214, Evalue=1e-56, Organism=Escherichia coli, GI1790299, Length=479, Percent_Identity=29.4363256784969, Blast_Score=182, Evalue=5e-47, Organism=Escherichia coli, GI1788905, Length=372, Percent_Identity=28.7634408602151, Blast_Score=161, Evalue=1e-40, Organism=Escherichia coli, GI1789233, Length=332, Percent_Identity=31.6265060240964, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI1787583, Length=334, Percent_Identity=30.5389221556886, Blast_Score=155, Evalue=6e-39, Organism=Escherichia coli, GI87081872, Length=224, Percent_Identity=35.7142857142857, Blast_Score=136, Evalue=4e-33, Organism=Escherichia coli, GI87082117, Length=351, Percent_Identity=29.9145299145299, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI1789087, Length=426, Percent_Identity=28.169014084507, Blast_Score=135, Evalue=8e-33, Organism=Escherichia coli, GI87082152, Length=347, Percent_Identity=30.2593659942363, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI87081858, Length=346, Percent_Identity=28.0346820809249, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1786524, Length=374, Percent_Identity=29.4117647058824, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1789828, Length=258, Percent_Identity=29.0697674418605, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1787487, Length=110, Percent_Identity=34.5454545454545, Blast_Score=66, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011006 - InterPro: IPR020441 - InterPro: IPR009057 - InterPro: IPR002197 - InterPro: IPR002078 - InterPro: IPR001789 [H]
Pfam domain/function: PF02954 HTH_8; PF00072 Response_reg; PF00158 Sigma54_activat [H]
EC number: NA
Molecular weight: Translated: 53967; Mature: 53836
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00688 SIGMA54_INTERACT_3 ; PS50045 SIGMA54_INTERACT_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRILIADDDPIQRRNLEAIVMRMGYRTILADGGVSALGFISQRKDIVLVLLDLTMPDM CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCEEEEEEECCCCCC DGLTVLSRMRAAGVAVPVIVLVHSDDMHRVAQAIRLGAADFMIKPLIFERVQVSVANVLK CHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH LDALTHEIQRARSSPRVHLSLSEMVAKSPEMERVMVLARRAAALDAPLLVEGETGSGRQT HHHHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHH LARAICGGGSRWRGPFVSLDCRGLTMENADDILFGTAKFCPDDPIVSAGKLAEADGGVLF HHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCCEEE LDEVGALPHHAQLRLFTAMQSGQYESNGSRVTSNARIMTSSSQPLVDFVHMGRFHAGLYH EECCCCCCCCHHEEEEEHHHCCCCCCCCCEEECCCEEEECCCCCHHHHHHHHHHHHHHHH LLGSFSIAMPPLRERVEDISILVHQFAVRFASEERLSHITGIAPHLLERLKAYQWPGNVR HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ELKNAVYRAVLLCDKSELTVEDFAQLNLGAAGFAGAQAMWQKPAAPLSVGRAGTAFSGID HHHHHHHHHHHEECCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC ADGEVRTLAAAEEEMIRFAIAHYDGQISEVARRLGIGRTTLYRKLKEYGIDVASISGKGK CCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCC ESDLENESCSWGRAAI CCCCCCCCCCCCCCCC >Mature Secondary Structure ATRILIADDDPIQRRNLEAIVMRMGYRTILADGGVSALGFISQRKDIVLVLLDLTMPDM CEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCEEEEEEECCCCCC DGLTVLSRMRAAGVAVPVIVLVHSDDMHRVAQAIRLGAADFMIKPLIFERVQVSVANVLK CHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH LDALTHEIQRARSSPRVHLSLSEMVAKSPEMERVMVLARRAAALDAPLLVEGETGSGRQT HHHHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHH LARAICGGGSRWRGPFVSLDCRGLTMENADDILFGTAKFCPDDPIVSAGKLAEADGGVLF HHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCCEEE LDEVGALPHHAQLRLFTAMQSGQYESNGSRVTSNARIMTSSSQPLVDFVHMGRFHAGLYH EECCCCCCCCHHEEEEEHHHCCCCCCCCCEEECCCEEEECCCCCHHHHHHHHHHHHHHHH LLGSFSIAMPPLRERVEDISILVHQFAVRFASEERLSHITGIAPHLLERLKAYQWPGNVR HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ELKNAVYRAVLLCDKSELTVEDFAQLNLGAAGFAGAQAMWQKPAAPLSVGRAGTAFSGID HHHHHHHHHHHEECCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC ADGEVRTLAAAEEEMIRFAIAHYDGQISEVARRLGIGRTTLYRKLKEYGIDVASISGKGK CCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCC ESDLENESCSWGRAAI CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11243806 [H]