Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
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Accession | NC_012442 |
Length | 1,185,518 |
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The map label for this gene is ycbK [H]
Identifier: 225685949
GI number: 225685949
Start: 83866
End: 85779
Strand: Direct
Name: ycbK [H]
Synonym: BMEA_B0087
Alternate gene names: 225685949
Gene position: 83866-85779 (Clockwise)
Preceding gene: 225685948
Following gene: 225685952
Centisome position: 7.07
GC content: 64.05
Gene sequence:
>1914_bases ATGCGCGCCAGGGCATCCATATCGGCTGGCCTTGCCATAGCGGCGGTCGCCATGGTGGTTTTGCCCTCGCAGGCTTCGGC TGAAACCCGCTCTCTGAAGCTTTACTATGTCCATACCGGCGAGAAGGCCGAGATTGCCTTCAAGAAGGATGGACGTTTTC TGCCTGATGGCCTGAAGCGCCTCAATGTTTTCCTGCGCGACTGGCGCCGCAACGAACCGACCAGGATGGATCCGCGCCTG TTCGACCTCATCTGGCAGGTCTATCAGTCCACCGGCTCGCGTGAATATATCACTGTCGTTTCAGCCTATCGTTCGCCCGC GACCAACGCCATGCTGCGTTCCAGTACGCGCGGCGTTGCCAAGAAGAGCCAGCATATGCTTGGCCGCGCGATGGACTATT TCATCCCCGGTGTCCCGCTTGCCAAGCTGCGTGCCATCGGTATGCGTTACCAGATCGGCGGCGTTGGCTATTATCCCCGG TCCGGCTCGCCTTTCGTGCATATGGATGTCGGCAATGTGCGCCACTGGCCGCGCATGAGCCGCCGCGAATTGCTGGCGCT GTTTCCTGACGGCAAGACCGTTCACATTCCCACCGACGGCAAGCCGCTGCCCGGCTATGAGCAGGCACTGGCGATGATCG AAAAGCGCAAGGCTGGTGGCGGAACCATCATGATGGCCAGCAACTCCTCTTCGCGGAAGCGCAAATCGCTGTTTGCTGCG CTTTTCGGCGGCGGCGGTGCCGACGAGGAAGAGGATAATGGCGATACCGCAGCGCCTGCCACGGCGCGCCCGGCGCGGGC AACCGCGCCCACGCGGCAGGCCCCGGCAGCCGTGCCGGCGGCGCCTGTGGAACAGCCGCGTGAAACCATGGTTGCAGCCC TTCCTGCCCGCGATGCTCCGGTGCCGATGCAGGCGCCGCGTCCGGAAACCGGGCTTGATGCGCAGGCCGCAGCGGCGGAA ACGCCGGTTGCCGCCTTCAATGTTCCTGTGCCTGCCCACAAGCCGCAAATGGCCCCGCAGGATGCCGTGGCGCTCGCCGC CGCCGAAGATCCGGCTGCTGCTGCACGCGCTGCCGTGGATGCCAATACGGCACAGGTTGCCGATGCAGGCATGTCTGCCG CATTGACGAACGGCTTTGTGCCCGTCCCCTCGGCCCGTCCGCATCTTGAAACAGATAATGTGCAGCTTGCCGCCGCCGTT ATTCCGACTGCCCGCCCTGAACGTCCCGGTGAGCATCCGGCAAGGGGGCAGGATGCGATTGCGGCCCTCGTCAACAGCCA GTCCGATGAGCCTGCCCAGATGGCCGGTGAGATGGCTGACGCGACAGGCAATGCGGTTGCGCCGCAGCCGGGTAAAACGG CGGCTTTCCCGCTGCCCACGCAAGCGCCGCGCGCCGACACGAAGCTTGCCATGGTTTCCAGGCGTGATGAAATTGGCGAG CTGATCGCGCCGCCTGAAGACGATTACGATTATGATGCCAAGCCGGTTGCAGCCGCTGCTCCGAAGCAGGCTCCGGCTCC GGTTCAGATGGCCTCCGCCGCCCCCACGAAGCCGGCTGCTGTGGCCTCTGCTGCCATGCGCAAGAAGGCTGCCATCATTG GTAAGACTGCGGATACCGGGGTGCGCACCACAACCAAGGGCGCACGTCATATGGCCAAGGCACCATCCAGGCCGCGCCCT GTGATACGGCCTGCTGTCATGCCGAGCTCGGAAATCGCCATGTCCACCGAGCCGGTTTCCAGCACGGTTCCCGTGACGAG CCCGGTCTTGCGCAATGATGCGCTGCGCTCTGCCCCGACCATGGTTTACACTGCCGGTTTCCAGCGTGGTGATCTGCCGA GCGCCCGCGCCAACCAGTTCAGCGGCAACGCCGTCACCTTCCTGACCGTGGCGAAGTTCACCGAAACCAATTGA
Upstream 100 bases:
>100_bases ATGGGCGGGCAAAACGGTAAGGCGATAAGATTCGATGAGCAGCATATCGACCATGAAAAAGTACTTTTCAAAGGTCTGGA CCGGAGCCTGCTCAGGCGTT
Downstream 100 bases:
>100_bases CCACCAGATCATGCAAGGAAAAGGGGCCGTTGCGGCCCCTTTTGCGCTCTTGCAGTGCGGTGAGATCAGGCTTTCAGCGC GGCTGCATCCTTTGCAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MRARASISAGLAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRL FDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIGMRYQIGGVGYYPR SGSPFVHMDVGNVRHWPRMSRRELLALFPDGKTVHIPTDGKPLPGYEQALAMIEKRKAGGGTIMMASNSSSRKRKSLFAA LFGGGGADEEEDNGDTAAPATARPARATAPTRQAPAAVPAAPVEQPRETMVAALPARDAPVPMQAPRPETGLDAQAAAAE TPVAAFNVPVPAHKPQMAPQDAVALAAAEDPAAAARAAVDANTAQVADAGMSAALTNGFVPVPSARPHLETDNVQLAAAV IPTARPERPGEHPARGQDAIAALVNSQSDEPAQMAGEMADATGNAVAPQPGKTAAFPLPTQAPRADTKLAMVSRRDEIGE LIAPPEDDYDYDAKPVAAAAPKQAPAPVQMASAAPTKPAAVASAAMRKKAAIIGKTADTGVRTTTKGARHMAKAPSRPRP VIRPAVMPSSEIAMSTEPVSSTVPVTSPVLRNDALRSAPTMVYTAGFQRGDLPSARANQFSGNAVTFLTVAKFTETN
Sequences:
>Translated_637_residues MRARASISAGLAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRL FDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIGMRYQIGGVGYYPR SGSPFVHMDVGNVRHWPRMSRRELLALFPDGKTVHIPTDGKPLPGYEQALAMIEKRKAGGGTIMMASNSSSRKRKSLFAA LFGGGGADEEEDNGDTAAPATARPARATAPTRQAPAAVPAAPVEQPRETMVAALPARDAPVPMQAPRPETGLDAQAAAAE TPVAAFNVPVPAHKPQMAPQDAVALAAAEDPAAAARAAVDANTAQVADAGMSAALTNGFVPVPSARPHLETDNVQLAAAV IPTARPERPGEHPARGQDAIAALVNSQSDEPAQMAGEMADATGNAVAPQPGKTAAFPLPTQAPRADTKLAMVSRRDEIGE LIAPPEDDYDYDAKPVAAAAPKQAPAPVQMASAAPTKPAAVASAAMRKKAAIIGKTADTGVRTTTKGARHMAKAPSRPRP VIRPAVMPSSEIAMSTEPVSSTVPVTSPVLRNDALRSAPTMVYTAGFQRGDLPSARANQFSGNAVTFLTVAKFTETN >Mature_637_residues MRARASISAGLAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKRLNVFLRDWRRNEPTRMDPRL FDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVAKKSQHMLGRAMDYFIPGVPLAKLRAIGMRYQIGGVGYYPR SGSPFVHMDVGNVRHWPRMSRRELLALFPDGKTVHIPTDGKPLPGYEQALAMIEKRKAGGGTIMMASNSSSRKRKSLFAA LFGGGGADEEEDNGDTAAPATARPARATAPTRQAPAAVPAAPVEQPRETMVAALPARDAPVPMQAPRPETGLDAQAAAAE TPVAAFNVPVPAHKPQMAPQDAVALAAAEDPAAAARAAVDANTAQVADAGMSAALTNGFVPVPSARPHLETDNVQLAAAV IPTARPERPGEHPARGQDAIAALVNSQSDEPAQMAGEMADATGNAVAPQPGKTAAFPLPTQAPRADTKLAMVSRRDEIGE LIAPPEDDYDYDAKPVAAAAPKQAPAPVQMASAAPTKPAAVASAAMRKKAAIIGKTADTGVRTTTKGARHMAKAPSRPRP VIRPAVMPSSEIAMSTEPVSSTVPVTSPVLRNDALRSAPTMVYTAGFQRGDLPSARANQFSGNAVTFLTVAKFTETN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_1666 [H]
Homologues:
Organism=Escherichia coli, GI1787157, Length=174, Percent_Identity=43.1034482758621, Blast_Score=132, Evalue=6e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010275 - InterPro: IPR009045 - InterPro: IPR006311 [H]
Pfam domain/function: PF05951 Peptidase_M15_2 [H]
EC number: NA
Molecular weight: Translated: 67147; Mature: 67147
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARASISAGLAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKR CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCHHHHHH LNVFLRDWRRNEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVA HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHH KKSQHMLGRAMDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWPRMS HHHHHHHHHHHHHHCCCCCHHHHHHHCEEEEECCEEECCCCCCCEEEEECCCCCCCCCCC RRELLALFPDGKTVHIPTDGKPLPGYEQALAMIEKRKAGGGTIMMASNSSSRKRKSLFAA CCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH LFGGGGADEEEDNGDTAAPATARPARATAPTRQAPAAVPAAPVEQPRETMVAALPARDAP HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCC VPMQAPRPETGLDAQAAAAETPVAAFNVPVPAHKPQMAPQDAVALAAAEDPAAAARAAVD CCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCHHEEEEECCCCHHHHHHHHC ANTAQVADAGMSAALTNGFVPVPSARPHLETDNVQLAAAVIPTARPERPGEHPARGQDAI CCHHHHHHHCCHHHHHCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHH AALVNSQSDEPAQMAGEMADATGNAVAPQPGKTAAFPLPTQAPRADTKLAMVSRRDEIGE HHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LIAPPEDDYDYDAKPVAAAAPKQAPAPVQMASAAPTKPAAVASAAMRKKAAIIGKTADTG HCCCCCCCCCCCCCCCHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHEEECCCCCC VRTTTKGARHMAKAPSRPRPVIRPAVMPSSEIAMSTEPVSSTVPVTSPVLRNDALRSAPT CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCHHHHHHHHHCCCC MVYTAGFQRGDLPSARANQFSGNAVTFLTVAKFTETN EEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC >Mature Secondary Structure MRARASISAGLAIAAVAMVVLPSQASAETRSLKLYYVHTGEKAEIAFKKDGRFLPDGLKR CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCHHHHHH LNVFLRDWRRNEPTRMDPRLFDLIWQVYQSTGSREYITVVSAYRSPATNAMLRSSTRGVA HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHH KKSQHMLGRAMDYFIPGVPLAKLRAIGMRYQIGGVGYYPRSGSPFVHMDVGNVRHWPRMS HHHHHHHHHHHHHHCCCCCHHHHHHHCEEEEECCEEECCCCCCCEEEEECCCCCCCCCCC RRELLALFPDGKTVHIPTDGKPLPGYEQALAMIEKRKAGGGTIMMASNSSSRKRKSLFAA CCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH LFGGGGADEEEDNGDTAAPATARPARATAPTRQAPAAVPAAPVEQPRETMVAALPARDAP HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCC VPMQAPRPETGLDAQAAAAETPVAAFNVPVPAHKPQMAPQDAVALAAAEDPAAAARAAVD CCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCHHEEEEECCCCHHHHHHHHC ANTAQVADAGMSAALTNGFVPVPSARPHLETDNVQLAAAVIPTARPERPGEHPARGQDAI CCHHHHHHHCCHHHHHCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHH AALVNSQSDEPAQMAGEMADATGNAVAPQPGKTAAFPLPTQAPRADTKLAMVSRRDEIGE HHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LIAPPEDDYDYDAKPVAAAAPKQAPAPVQMASAAPTKPAAVASAAMRKKAAIIGKTADTG HCCCCCCCCCCCCCCCHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHEEECCCCCC VRTTTKGARHMAKAPSRPRPVIRPAVMPSSEIAMSTEPVSSTVPVTSPVLRNDALRSAPT CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCHHHHHHHHHCCCC MVYTAGFQRGDLPSARANQFSGNAVTFLTVAKFTETN EEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]