Definition | Wolbachia sp. wRi, complete genome. |
---|---|
Accession | NC_012416 |
Length | 1,445,873 |
Click here to switch to the map view.
The map label for this gene is 225630445
Identifier: 225630445
GI number: 225630445
Start: 755153
End: 755371
Strand: Reverse
Name: 225630445
Synonym: WRi_006890
Alternate gene names: NA
Gene position: 755371-755153 (Counterclockwise)
Preceding gene: 225630447
Following gene: 225630444
Centisome position: 52.24
GC content: 36.99
Gene sequence:
>219_bases ATGACAAACACAGGAAAGATCCCTGTAGCAGTAATTGCTACTATGGTGATACAAACAATAGCATTGATCTGGTGGCTAGC TAAGCTCGACTTAAGAGTTCATATGCATGATAAATTTATAGAGCAAAATCAAAGGACTACAGAAATCATCTATCGTCTTG AAGAAAGGGTCAAAAACCTTGCTGAAGAAGTTAACGAGCTTGAGCAGAGACAAAAATAA
Upstream 100 bases:
>100_bases TGTTTAGTGCAACTAATTAACTTTATTTTAGAAAAGATTTTTTGGACGTATTTTTGATGAATCTTGTATATGTATATATA CAACTTTTCCTTTAAAAAAG
Downstream 100 bases:
>100_bases CTATAACAAATGACAAAGTACATTTTATCTGTAGATGGAGGAGGAATTAGAGGAATAATTCCTGCCATTATTCTAGCAGA AATTGAATCTAGGACAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MTNTGKIPVAVIATMVIQTIALIWWLAKLDLRVHMHDKFIEQNQRTTEIIYRLEERVKNLAEEVNELEQRQK
Sequences:
>Translated_72_residues MTNTGKIPVAVIATMVIQTIALIWWLAKLDLRVHMHDKFIEQNQRTTEIIYRLEERVKNLAEEVNELEQRQK >Mature_71_residues TNTGKIPVAVIATMVIQTIALIWWLAKLDLRVHMHDKFIEQNQRTTEIIYRLEERVKNLAEEVNELEQRQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8559; Mature: 8428
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTGKIPVAVIATMVIQTIALIWWLAKLDLRVHMHDKFIEQNQRTTEIIYRLEERVKNL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AEEVNELEQRQK HHHHHHHHHHCC >Mature Secondary Structure TNTGKIPVAVIATMVIQTIALIWWLAKLDLRVHMHDKFIEQNQRTTEIIYRLEERVKNL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AEEVNELEQRQK HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA