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The map label for this gene is 225630444

Identifier: 225630444

GI number: 225630444

Start: 754223

End: 755143

Strand: Reverse

Name: 225630444

Synonym: WRi_006880

Alternate gene names: NA

Gene position: 755143-754223 (Counterclockwise)

Preceding gene: 225630445

Following gene: 225630443

Centisome position: 52.23

GC content: 36.59

Gene sequence:

>921_bases
ATGACAAAGTACATTTTATCTGTAGATGGAGGAGGAATTAGAGGAATAATTCCTGCCATTATTCTAGCAGAAATTGAATC
TAGGACAAAAAAGCCAATTTCCCAGATCTTTGACTTAATGGCAGGAACCTCAACCGGTGGAATTGTTGTTGCTGGACTTT
GTGAAAGCAATAAACTTCAATACTCTGCCAATGATTTGGTTGAACTTTACCAAGAGTATGGAGCATATATCTTTCAAGCA
TCACTTTGGAGAAAATCAATCGCTTCTTGGCTGAGTGGTTCTCAGTACTCATATAAAAATATGGAATTTATTCTCAACAA
ATACTTCGGCGAAAGCACTATGGCCGATGTTGCGAGTAATCTACTGCTCACCAGTTATGACATTCACAATAGTTGTGAAT
TTTTCTTCAAAAGTTGGAAAGAAGAAAACATTAAGTTAAAAGATGCACTCAGAGCTACAACAGCTGCTCCAACGTACTTC
ACACCAAAACGTCTAAAAATTAGCCAAACAGAGAGAGTGTTGATAGATGGCGGAGTGTTTGCCAATAATCCAGCGGCTTG
TGCATATGCAAGTGGTAAAAGGTTATTTCCAAATGATGAGATTATACTGCTATCAATAGGCACTGGTGGAACAAATAGAA
GTATAAAGTATGCTAACTCAAGGAGATTTGGCAAAATAGGGTGGATCAAGCCACTACTGAATGTGATGTTTGCTTCTGGA
TTGGATTGCGTTGATTATCAACTAGAACAAGTAATAGATGATAAATACATAAGAATACAATCGCAATTGAAAGTAGCATC
GACTGAGATGGACAATATTACACTCAAAAATATCAAATTTCTTCAGCAAGAGGCAAGTAAAATGATAGAGGATAACCAGA
AAGTGATAGACAAATTCTGCAAGCAAAATCCAAAACTATAA

Upstream 100 bases:

>100_bases
TCAAAGGACTACAGAAATCATCTATCGTCTTGAAGAAAGGGTCAAAAACCTTGCTGAAGAAGTTAACGAGCTTGAGCAGA
GACAAAAATAACTATAACAA

Downstream 100 bases:

>100_bases
CTGAGCTAGAAAAACGAAATAAGCGAGTTTCTAGTATCTACTTTAATAAATTTACTAAAATATTTTTTTAATATTATATA
TTGAATACAGAAGCACAAGA

Product: patatin family protein

Products: NA

Alternate protein names: Patatin Family Protein; Patatin-Like Phospholipase; Phospholipase Patatin Family; Patatin-Related Protein; Patatin-Like Protein; Patatin-Like Phospholipase Family; Phospholipase

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTKYILSVDGGGIRGIIPAIILAEIESRTKKPISQIFDLMAGTSTGGIVVAGLCESNKLQYSANDLVELYQEYGAYIFQA
SLWRKSIASWLSGSQYSYKNMEFILNKYFGESTMADVASNLLLTSYDIHNSCEFFFKSWKEENIKLKDALRATTAAPTYF
TPKRLKISQTERVLIDGGVFANNPAACAYASGKRLFPNDEIILLSIGTGGTNRSIKYANSRRFGKIGWIKPLLNVMFASG
LDCVDYQLEQVIDDKYIRIQSQLKVASTEMDNITLKNIKFLQQEASKMIEDNQKVIDKFCKQNPKL

Sequences:

>Translated_306_residues
MTKYILSVDGGGIRGIIPAIILAEIESRTKKPISQIFDLMAGTSTGGIVVAGLCESNKLQYSANDLVELYQEYGAYIFQA
SLWRKSIASWLSGSQYSYKNMEFILNKYFGESTMADVASNLLLTSYDIHNSCEFFFKSWKEENIKLKDALRATTAAPTYF
TPKRLKISQTERVLIDGGVFANNPAACAYASGKRLFPNDEIILLSIGTGGTNRSIKYANSRRFGKIGWIKPLLNVMFASG
LDCVDYQLEQVIDDKYIRIQSQLKVASTEMDNITLKNIKFLQQEASKMIEDNQKVIDKFCKQNPKL
>Mature_305_residues
TKYILSVDGGGIRGIIPAIILAEIESRTKKPISQIFDLMAGTSTGGIVVAGLCESNKLQYSANDLVELYQEYGAYIFQAS
LWRKSIASWLSGSQYSYKNMEFILNKYFGESTMADVASNLLLTSYDIHNSCEFFFKSWKEENIKLKDALRATTAAPTYFT
PKRLKISQTERVLIDGGVFANNPAACAYASGKRLFPNDEIILLSIGTGGTNRSIKYANSRRFGKIGWIKPLLNVMFASGL
DCVDYQLEQVIDDKYIRIQSQLKVASTEMDNITLKNIKFLQQEASKMIEDNQKVIDKFCKQNPKL

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17544092, Length=233, Percent_Identity=30.0429184549356, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17551040, Length=247, Percent_Identity=25.1012145748988, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17567809, Length=228, Percent_Identity=28.0701754385965, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34342; Mature: 34211

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKYILSVDGGGIRGIIPAIILAEIESRTKKPISQIFDLMAGTSTGGIVVAGLCESNKLQ
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEE
YSANDLVELYQEYGAYIFQASLWRKSIASWLSGSQYSYKNMEFILNKYFGESTMADVASN
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
LLLTSYDIHNSCEFFFKSWKEENIKLKDALRATTAAPTYFTPKRLKISQTERVLIDGGVF
HHEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCEE
ANNPAACAYASGKRLFPNDEIILLSIGTGGTNRSIKYANSRRFGKIGWIKPLLNVMFASG
CCCCCCEEECCCCEECCCCCEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCC
LDCVDYQLEQVIDDKYIRIQSQLKVASTEMDNITLKNIKFLQQEASKMIEDNQKVIDKFC
CCHHHHHHHHHHCHHHEEHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHH
KQNPKL
HCCCCC
>Mature Secondary Structure 
TKYILSVDGGGIRGIIPAIILAEIESRTKKPISQIFDLMAGTSTGGIVVAGLCESNKLQ
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEE
YSANDLVELYQEYGAYIFQASLWRKSIASWLSGSQYSYKNMEFILNKYFGESTMADVASN
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
LLLTSYDIHNSCEFFFKSWKEENIKLKDALRATTAAPTYFTPKRLKISQTERVLIDGGVF
HHEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCEE
ANNPAACAYASGKRLFPNDEIILLSIGTGGTNRSIKYANSRRFGKIGWIKPLLNVMFASG
CCCCCCEEECCCCEECCCCCEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCC
LDCVDYQLEQVIDDKYIRIQSQLKVASTEMDNITLKNIKFLQQEASKMIEDNQKVIDKFC
CCHHHHHHHHHHCHHHEEHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHH
KQNPKL
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA