Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

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The map label for this gene is 225630447

Identifier: 225630447

GI number: 225630447

Start: 755998

End: 756978

Strand: Reverse

Name: 225630447

Synonym: WRi_006910

Alternate gene names: NA

Gene position: 756978-755998 (Counterclockwise)

Preceding gene: 225630448

Following gene: 225630445

Centisome position: 52.35

GC content: 35.68

Gene sequence:

>981_bases
ATGACACCAGACTTTAGTATTTCAGTAGAGGGCATTTCCATCACTGAATTGGTGAAAAGTCGATTGGTATCAATGCATAT
TACTGATGAAGCAGGAGTAATAAGTGATACTGCTGTAATTCATCTTGATGACCGTGATTCATTATTTGAGATTCCTAGAA
CTGGGGCAAAGCTAAATATTTTACTCGGGTATAAGGAAACTGGCATTGTGCCAATGGGAGATTATATAGTAAATGAAATT
ACGCTACAAGGCCCGCCACAATCACTAAAGATTAAAAGTCATGCAGCGGATCTAAAAGAGTCATTAAAGGAACAAGTGTT
TAATGAGTGGCATCAAATCACCTTAAATGATTTGGTAAAAAAGATTGCAGACAAACATGGCTATCAAGCTAAAATTGCTG
CAGAGTTTGTAAATATCATGATATCACATATTGATCAAACTGCAGAGAGCGATATGCATTTTTTAACCAGGCTTGCTCAA
ATTTATGGAGCAATAGCAAAACCTGCAGGAGGATATTTACTGTTTGTTTCAAAAGGAAAAGCAAAATCAGTTACCGGAAA
AACTTTAAGCACTGTTACTTTAACACCTAGAGATATTACAAATTGGAAAGTAAAATTTAATGAGCGTAATCAATATGGCT
CGGTTATTGCTTACTGGTATGATTATGAAAAAGCAGAGACAATAACGGAAAAAGTAGGTGATCAAGAACCAAGCTATATT
TTGCGAGATATTTATGCAAGTAGTGATTTGGCACAAAGTGCAGCATCTGCGAAGTTGAATCAGCTGATGAGTAATGCAGC
AACACTCAATGTCACAATGCCAGGAAATCCTGAATTATTTGCTGAAGCAAAGATTAATCTTTCTGGATTTCGCAAAGGAG
TTTATGGTAAATGGATAATAAATAGGGCTGAGCATGTAATTGATAACCTTGGCTATCGTACTATTGTTACGGGAATAATT
GATAGTTGGAAAGTAAATTGA

Upstream 100 bases:

>100_bases
GGGCTTGCAGAGTACGAACTTCTTCCTGCAGGATTAATCATTAAACTTCCTGTTATTCAAAAAGAGACGCAAAAGCAAGT
AGTAAAACTATGGGATTAAA

Downstream 100 bases:

>100_bases
TAATTTCCTCATAGATATCTTCTTTATTATTGTTTAATTCCTCTACAGCAAGATCTAAAGGAGTTTTTTTATCTTTGTTT
TTAGCAGAAGGATTTGCTCC

Product: tail protein D, putative

Products: NA

Alternate protein names: Phage Late Control D Family Protein; Phage Late Control D; Phage Late Control Gene D Protein; Late Control Gene D Protein; Tail Protein D; Phage-Related Tail Protein; Bacteriophage Regulatory Protein; Phage Protein D; Phage Late Control D Protein; Regulator Of Late Gene Expression; Bacteriophage Protein; Phage Tail Protein; Pyocin R2_PP Tail Formation; Prophage Tail Protein; Prophage; Fels-2 Prophage Protein; Phage Protein D-Like; Phage Late Control; Phage Protein; Gene D Protein; Phage-Related Late Control Gene Protein; Phage Tail Protein D; Pyocin R2_PP Tail Formation GPD; Cytoplasmic Protein; Phage Late Control Gene D Protein GpD; Gene Late Control D Protein; Bacteriophage P2 GpD Protein; Bacteriophage Late Gene Regulator; Bacteriophage Late Control D Protein; Bacteriophage-Related Tail D Protein; Phage-Like Tail Protein; Bacteriophage P2 Tail Protein GPD; Phage-Like Protein; Late Control D Protein; Control Protein For Phage Late Genes Expression; Phage Regulator; Regulator Of Late Phage Gene Expression; Phage Late Control Gene D Protein-Like Protein; Phage Late Control Gene D Protein GPD; Late Control Gene D Protein Prophage; Bacteriophage Late Gene Control Protein D; Bacteriophage Tail Protein D; Late Gene Regulator

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MTPDFSISVEGISITELVKSRLVSMHITDEAGVISDTAVIHLDDRDSLFEIPRTGAKLNILLGYKETGIVPMGDYIVNEI
TLQGPPQSLKIKSHAADLKESLKEQVFNEWHQITLNDLVKKIADKHGYQAKIAAEFVNIMISHIDQTAESDMHFLTRLAQ
IYGAIAKPAGGYLLFVSKGKAKSVTGKTLSTVTLTPRDITNWKVKFNERNQYGSVIAYWYDYEKAETITEKVGDQEPSYI
LRDIYASSDLAQSAASAKLNQLMSNAATLNVTMPGNPELFAEAKINLSGFRKGVYGKWIINRAEHVIDNLGYRTIVTGII
DSWKVN

Sequences:

>Translated_326_residues
MTPDFSISVEGISITELVKSRLVSMHITDEAGVISDTAVIHLDDRDSLFEIPRTGAKLNILLGYKETGIVPMGDYIVNEI
TLQGPPQSLKIKSHAADLKESLKEQVFNEWHQITLNDLVKKIADKHGYQAKIAAEFVNIMISHIDQTAESDMHFLTRLAQ
IYGAIAKPAGGYLLFVSKGKAKSVTGKTLSTVTLTPRDITNWKVKFNERNQYGSVIAYWYDYEKAETITEKVGDQEPSYI
LRDIYASSDLAQSAASAKLNQLMSNAATLNVTMPGNPELFAEAKINLSGFRKGVYGKWIINRAEHVIDNLGYRTIVTGII
DSWKVN
>Mature_325_residues
TPDFSISVEGISITELVKSRLVSMHITDEAGVISDTAVIHLDDRDSLFEIPRTGAKLNILLGYKETGIVPMGDYIVNEIT
LQGPPQSLKIKSHAADLKESLKEQVFNEWHQITLNDLVKKIADKHGYQAKIAAEFVNIMISHIDQTAESDMHFLTRLAQI
YGAIAKPAGGYLLFVSKGKAKSVTGKTLSTVTLTPRDITNWKVKFNERNQYGSVIAYWYDYEKAETITEKVGDQEPSYIL
RDIYASSDLAQSAASAKLNQLMSNAATLNVTMPGNPELFAEAKINLSGFRKGVYGKWIINRAEHVIDNLGYRTIVTGIID
SWKVN

Specific function: Unknown

COG id: COG3500

COG function: function code R; Phage protein D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36213; Mature: 36082

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDFSISVEGISITELVKSRLVSMHITDEAGVISDTAVIHLDDRDSLFEIPRTGAKLNI
CCCCCEEEECCCCHHHHHHHHHEEEEECCCCCCEECEEEEEECCCCCHHHCCCCCCEEEE
LLGYKETGIVPMGDYIVNEITLQGPPQSLKIKSHAADLKESLKEQVFNEWHQITLNDLVK
EEEECCCCCEECCCHHEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHEEEHHHHHH
KIADKHGYQAKIAAEFVNIMISHIDQTAESDMHFLTRLAQIYGAIAKPAGGYLLFVSKGK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
AKSVTGKTLSTVTLTPRDITNWKVKFNERNQYGSVIAYWYDYEKAETITEKVGDQEPSYI
CCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHH
LRDIYASSDLAQSAASAKLNQLMSNAATLNVTMPGNPELFAEAKINLSGFRKGVYGKWII
HHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEHHHHHCCCCHHHHH
NRAEHVIDNLGYRTIVTGIIDSWKVN
HHHHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TPDFSISVEGISITELVKSRLVSMHITDEAGVISDTAVIHLDDRDSLFEIPRTGAKLNI
CCCCEEEECCCCHHHHHHHHHEEEEECCCCCCEECEEEEEECCCCCHHHCCCCCCEEEE
LLGYKETGIVPMGDYIVNEITLQGPPQSLKIKSHAADLKESLKEQVFNEWHQITLNDLVK
EEEECCCCCEECCCHHEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHEEEHHHHHH
KIADKHGYQAKIAAEFVNIMISHIDQTAESDMHFLTRLAQIYGAIAKPAGGYLLFVSKGK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
AKSVTGKTLSTVTLTPRDITNWKVKFNERNQYGSVIAYWYDYEKAETITEKVGDQEPSYI
CCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHH
LRDIYASSDLAQSAASAKLNQLMSNAATLNVTMPGNPELFAEAKINLSGFRKGVYGKWII
HHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEHHHHHCCCCHHHHH
NRAEHVIDNLGYRTIVTGIIDSWKVN
HHHHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA