Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
---|---|
Accession | NC_012032 |
Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is yesP [H]
Identifier: 222527382
GI number: 222527382
Start: 5169910
End: 5170779
Strand: Direct
Name: yesP [H]
Synonym: Chy400_4172
Alternate gene names: 222527382
Gene position: 5169910-5170779 (Clockwise)
Preceding gene: 222527381
Following gene: 222527383
Centisome position: 98.12
GC content: 47.82
Gene sequence:
>870_bases ATGGCAAAGAGTGGCTTGAGACTACGCTTTCGTCTGCGTGAAAATATGCAGGGTTATCGATTCATCATGCCCTGGCTGGT GGGATTTATCCTCTTCACGGCCACACCGCTGATACAGACATTTCAGTATAGCCTGAGCGATGTCCGAGTCGCGATTACAG GTGTTGAGCTAACCGCAATTGGCTGGCAAAACTACACCCGTGCGCTCTTTACTGATCCAACGTTTGTGCAGCTTCTGATC GAATATATTATTGAGACCAGTATTTCAGTACCGATTATTTTGATCTTTGCTATGATTATTGCCCTGTTTTTAAATGTCCC ATTCTGGGGCCGCGGTCTTTTTCGCACAATCTTCTTTTTGCCGGTCGTCATTACCAGTGGCCCCGTTATCGGCGAACTGA CCGCACAAGGAGCCACCGCCGCACCACAGATTGCTACTTCTGCGGTAGTAACCGGGTTTGTTGCTCAATTACCACCGTTA CTGCGCGATCCGGTACAATATTTGCTCACATCTTTTATTCTCATTTTATGGTTTTCCGGTGTGCAGATTCTGATCTATCT GGCCGGTTTGCAGAAAATAGACCGTTTTGTCTACGAAGCAGCCGCTGTCGATGGAGCATCAGCCTGGGAGATGTTCTGGA AGATCACGCTACCGTCGTTATCCACGACAACCCTGATAAATGCACTCTATACCGTGGTGACACTCTCCCATTTTTCAGAA AATAAAGTTGTCAAATACATCCATTCACGCATTTATGATGTTGAAGGCGGGATCGGCTATGCCAGTGCAATGACCTTTCT TCATTCGCTGGCCCTGATCGGACTGTTGATCGCGACATTTCTGGTTCTCCGTCCGCGTACCCGGGATTAA
Upstream 100 bases:
>100_bases TACGACGATCCCACCCCGTGATGCGGTACTTATCGAACGACCGTGACACCTGTTCGCTACATCTCAGGGTGTCAGGAACG GAGATACGAGGAGGAGCAAC
Downstream 100 bases:
>100_bases GCCAATGGATACCACCATCCGAACCCATACCAGTAAAAGGCACCGGATCATGCCACGGCTCCGCTTTGACTATCTATGGC GGATTTTGTGGGGAGTCCAC
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MAKSGLRLRFRLRENMQGYRFIMPWLVGFILFTATPLIQTFQYSLSDVRVAITGVELTAIGWQNYTRALFTDPTFVQLLI EYIIETSISVPIILIFAMIIALFLNVPFWGRGLFRTIFFLPVVITSGPVIGELTAQGATAAPQIATSAVVTGFVAQLPPL LRDPVQYLLTSFILILWFSGVQILIYLAGLQKIDRFVYEAAAVDGASAWEMFWKITLPSLSTTTLINALYTVVTLSHFSE NKVVKYIHSRIYDVEGGIGYASAMTFLHSLALIGLLIATFLVLRPRTRD
Sequences:
>Translated_289_residues MAKSGLRLRFRLRENMQGYRFIMPWLVGFILFTATPLIQTFQYSLSDVRVAITGVELTAIGWQNYTRALFTDPTFVQLLI EYIIETSISVPIILIFAMIIALFLNVPFWGRGLFRTIFFLPVVITSGPVIGELTAQGATAAPQIATSAVVTGFVAQLPPL LRDPVQYLLTSFILILWFSGVQILIYLAGLQKIDRFVYEAAAVDGASAWEMFWKITLPSLSTTTLINALYTVVTLSHFSE NKVVKYIHSRIYDVEGGIGYASAMTFLHSLALIGLLIATFLVLRPRTRD >Mature_288_residues AKSGLRLRFRLRENMQGYRFIMPWLVGFILFTATPLIQTFQYSLSDVRVAITGVELTAIGWQNYTRALFTDPTFVQLLIE YIIETSISVPIILIFAMIIALFLNVPFWGRGLFRTIFFLPVVITSGPVIGELTAQGATAAPQIATSAVVTGFVAQLPPLL RDPVQYLLTSFILILWFSGVQILIYLAGLQKIDRFVYEAAAVDGASAWEMFWKITLPSLSTTTLINALYTVVTLSHFSEN KVVKYIHSRIYDVEGGIGYASAMTFLHSLALIGLLIATFLVLRPRTRD
Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32314; Mature: 32182
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSGLRLRFRLRENMQGYRFIMPWLVGFILFTATPLIQTFQYSLSDVRVAITGVELTAI CCCCCCEEHEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE GWQNYTRALFTDPTFVQLLIEYIIETSISVPIILIFAMIIALFLNVPFWGRGLFRTIFFL CHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH PVVITSGPVIGELTAQGATAAPQIATSAVVTGFVAQLPPLLRDPVQYLLTSFILILWFSG HHHHHCCCCEEHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VQILIYLAGLQKIDRFVYEAAAVDGASAWEMFWKITLPSLSTTTLINALYTVVTLSHFSE HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCC NKVVKYIHSRIYDVEGGIGYASAMTFLHSLALIGLLIATFLVLRPRTRD HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AKSGLRLRFRLRENMQGYRFIMPWLVGFILFTATPLIQTFQYSLSDVRVAITGVELTAI CCCCCEEHEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE GWQNYTRALFTDPTFVQLLIEYIIETSISVPIILIFAMIIALFLNVPFWGRGLFRTIFFL CHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH PVVITSGPVIGELTAQGATAAPQIATSAVVTGFVAQLPPLLRDPVQYLLTSFILILWFSG HHHHHCCCCEEHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VQILIYLAGLQKIDRFVYEAAAVDGASAWEMFWKITLPSLSTTTLINALYTVVTLSHFSE HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCC NKVVKYIHSRIYDVEGGIGYASAMTFLHSLALIGLLIATFLVLRPRTRD HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]