Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222527381
Identifier: 222527381
GI number: 222527381
Start: 5167723
End: 5169855
Strand: Direct
Name: 222527381
Synonym: Chy400_4171
Alternate gene names: NA
Gene position: 5167723-5169855 (Clockwise)
Preceding gene: 222527380
Following gene: 222527382
Centisome position: 98.08
GC content: 55.93
Gene sequence:
>2133_bases GTGGATAAGATTATCAATATTCTCATTGTTGTAACACTATTTATGACGTGTCAGCCGGTTGCACAAGCCGCAGGCTGGCA ACGTGTGGTTCCTGACGGCTATGAACGAGTAGCGACCAACACCGGTTTCGAGCTGTATCTCAACCGTGAAACGCTGGCGT TTAAGGTGCTTGACCGGCGCAGCGGTTACCTCTGGTCATCGAATCTGGACGAGGTCACGCCCGAAGATCGCCTCAATCGA AGCTGGACGGCCTTTGCCCGGAGTGGGATCAGCATTGAGTATATGGATAGCCGCGCCAATACGCGCCGGGCTTCGATCAC AAATGCCGCCCATGAACTGGACATCACGCTGATCAATAACGGCTTCAGGGGACAATTGACCTTTACTGAACCGGCGATCA CACTCACCGTACAGGTCACACTCACAGCAGATGGGGTACAGATTGAGGTGCCGGCAAGTGGCATTGTTGAAGGCGGATCA TTTCGGCTGGCGCAGCTACACCTCTACCCCTTCTTCGGTGCCACTCGCGCTGCCCAGACCCGTGGCTACATGCTGATCCC TGATGGAAGCGGTAGCCTGATCACCTTTGCCGAACAGACCAACGCCCGCACCATGTTTTACGGTCGCTACTACGGTGCCG ATCTGGGGATGCGCGGATCATTCCCCAACAACCCCAATAGCCGTCCGCCATACCTGCTCTCGGCTCCGGTGTTCGGTATG GTGCATGGCGAGGGTCAGCATGCGTTCCTGAGTATTCTTGAACACGGATCGGCCTACGCCGAATTACAGGCCCATCCGGC GGGGATCATCACCCAATTCAATTTTCTCTACAACCTCTTCATCTACAACGAGAGCTACTTTCAGCCGACCAACCGCGCCG GTAGCGGCGTCACCGTGATTCAACCGCAAACCAATACCTTCGACATTGTCCAGCACTACCACTTTCTGACCGGGCGCGAA GCCGACTATGTCGGACTGGCACGAGCCTATCAGCGCTTCCTCGTTGACCGGGGTGTCTTGCGGGCAATGCCTGCAACGCA GCGTGATCTGCCACTGCGGATCGAATTTTTAGGTGCTGAGCGTGAGCGTGTTCTCTTCTGGCAACGCGCCATTCCCATGA CAACGATTGCCCACATGGAGGAGATACTGGCGAGCTTGCCAACGCAACGGGTTGAAGCGACCTGCTACGGCTGGCAACCA TTAGGCGCAACCGCACCACAACCGCTGACCCTCCGTATCGAAGGCGCCCTGGGGAGTCGAAATGATCTGATTGCCCTGGC CCAAACCATCACTGACCGGGGAGGGCACCTCAACCTGTACCTTGATCCACAAGCCGGTATTGTTGACGAGAGCGGCTACA CTCGCAACGAGGTAGCAATGGCAATCAACAAAGCAATGCTCCAGGGCAACCATCGCGGGATGCAGCAACTCTACCTCAAC CTGCCCGCAGTCGAACGACGCATCACCGCGCTGAAAACGGCAACGCGGGATTATAACCTGGGCCTGGCACTTGATGGGAT TGGGTTTCGCCTCTATAGCGATTTTCGCAACGAAACCCGGCGCAACCGCGAGGCTATGATCCAGGCCTATCAGGAACTGC TCGCCGAGAACGGCCCCTTTGCCCTTTACCGGCCTAATGCGTATCTGTGGCACGCCACCCGTGCTTACTACGACATGCCA CTCGGCGATAGTGGCTACATCTACACATCCACAAGCGTGCCATTTCTGCCAATCGTTCTGGCCGGCTATATACCCTATTA CGGGCCGGCACTCAATTTTTCGGCCAATGTCGAAGAAGATCTGCTGCGTCACGCCGACTATGGCGCATATCCATCATTCT TCCTGACCCACGAGCCAACCGCAGCCATGTTGAAAACCAACTCAAACTGGCTCTACACCTCGGCATACGCGCAATGGCGT GATGAAATTGAAAAGGCGTATACCTGGTTAGCAAAGCTGTTAGGACCGGTACAGGGTTCATCCATTGTGGCCCGTTCAGC ACCCTTCCCTGGCGTCTCGATCACCGATTATGCGAATGGGAAACGCATCATCGTAAACTACACGACTCGCCAGATAACCC TGGCCGGTACGACGATCCCACCCCGTGATGCGGTACTTATCGAACGACCGTGA
Upstream 100 bases:
>100_bases TTCACGATGGTCATGCTGAGTTTGACCGCATACATTCTCTATCTGCTCTTTGGGCAACTGATTGATTTTGTCGTCACGAT CTGGCAGGAGATTGGGTTAC
Downstream 100 bases:
>100_bases CACCTGTTCGCTACATCTCAGGGTGTCAGGAACGGAGATACGAGGAGGAGCAACATGGCAAAGAGTGGCTTGAGACTACG CTTTCGTCTGCGTGAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 710; Mature: 710
Protein sequence:
>710_residues MDKIINILIVVTLFMTCQPVAQAAGWQRVVPDGYERVATNTGFELYLNRETLAFKVLDRRSGYLWSSNLDEVTPEDRLNR SWTAFARSGISIEYMDSRANTRRASITNAAHELDITLINNGFRGQLTFTEPAITLTVQVTLTADGVQIEVPASGIVEGGS FRLAQLHLYPFFGATRAAQTRGYMLIPDGSGSLITFAEQTNARTMFYGRYYGADLGMRGSFPNNPNSRPPYLLSAPVFGM VHGEGQHAFLSILEHGSAYAELQAHPAGIITQFNFLYNLFIYNESYFQPTNRAGSGVTVIQPQTNTFDIVQHYHFLTGRE ADYVGLARAYQRFLVDRGVLRAMPATQRDLPLRIEFLGAERERVLFWQRAIPMTTIAHMEEILASLPTQRVEATCYGWQP LGATAPQPLTLRIEGALGSRNDLIALAQTITDRGGHLNLYLDPQAGIVDESGYTRNEVAMAINKAMLQGNHRGMQQLYLN LPAVERRITALKTATRDYNLGLALDGIGFRLYSDFRNETRRNREAMIQAYQELLAENGPFALYRPNAYLWHATRAYYDMP LGDSGYIYTSTSVPFLPIVLAGYIPYYGPALNFSANVEEDLLRHADYGAYPSFFLTHEPTAAMLKTNSNWLYTSAYAQWR DEIEKAYTWLAKLLGPVQGSSIVARSAPFPGVSITDYANGKRIIVNYTTRQITLAGTTIPPRDAVLIERP
Sequences:
>Translated_710_residues MDKIINILIVVTLFMTCQPVAQAAGWQRVVPDGYERVATNTGFELYLNRETLAFKVLDRRSGYLWSSNLDEVTPEDRLNR SWTAFARSGISIEYMDSRANTRRASITNAAHELDITLINNGFRGQLTFTEPAITLTVQVTLTADGVQIEVPASGIVEGGS FRLAQLHLYPFFGATRAAQTRGYMLIPDGSGSLITFAEQTNARTMFYGRYYGADLGMRGSFPNNPNSRPPYLLSAPVFGM VHGEGQHAFLSILEHGSAYAELQAHPAGIITQFNFLYNLFIYNESYFQPTNRAGSGVTVIQPQTNTFDIVQHYHFLTGRE ADYVGLARAYQRFLVDRGVLRAMPATQRDLPLRIEFLGAERERVLFWQRAIPMTTIAHMEEILASLPTQRVEATCYGWQP LGATAPQPLTLRIEGALGSRNDLIALAQTITDRGGHLNLYLDPQAGIVDESGYTRNEVAMAINKAMLQGNHRGMQQLYLN LPAVERRITALKTATRDYNLGLALDGIGFRLYSDFRNETRRNREAMIQAYQELLAENGPFALYRPNAYLWHATRAYYDMP LGDSGYIYTSTSVPFLPIVLAGYIPYYGPALNFSANVEEDLLRHADYGAYPSFFLTHEPTAAMLKTNSNWLYTSAYAQWR DEIEKAYTWLAKLLGPVQGSSIVARSAPFPGVSITDYANGKRIIVNYTTRQITLAGTTIPPRDAVLIERP >Mature_710_residues MDKIINILIVVTLFMTCQPVAQAAGWQRVVPDGYERVATNTGFELYLNRETLAFKVLDRRSGYLWSSNLDEVTPEDRLNR SWTAFARSGISIEYMDSRANTRRASITNAAHELDITLINNGFRGQLTFTEPAITLTVQVTLTADGVQIEVPASGIVEGGS FRLAQLHLYPFFGATRAAQTRGYMLIPDGSGSLITFAEQTNARTMFYGRYYGADLGMRGSFPNNPNSRPPYLLSAPVFGM VHGEGQHAFLSILEHGSAYAELQAHPAGIITQFNFLYNLFIYNESYFQPTNRAGSGVTVIQPQTNTFDIVQHYHFLTGRE ADYVGLARAYQRFLVDRGVLRAMPATQRDLPLRIEFLGAERERVLFWQRAIPMTTIAHMEEILASLPTQRVEATCYGWQP LGATAPQPLTLRIEGALGSRNDLIALAQTITDRGGHLNLYLDPQAGIVDESGYTRNEVAMAINKAMLQGNHRGMQQLYLN LPAVERRITALKTATRDYNLGLALDGIGFRLYSDFRNETRRNREAMIQAYQELLAENGPFALYRPNAYLWHATRAYYDMP LGDSGYIYTSTSVPFLPIVLAGYIPYYGPALNFSANVEEDLLRHADYGAYPSFFLTHEPTAAMLKTNSNWLYTSAYAQWR DEIEKAYTWLAKLLGPVQGSSIVARSAPFPGVSITDYANGKRIIVNYTTRQITLAGTTIPPRDAVLIERP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79424; Mature: 79424
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKIINILIVVTLFMTCQPVAQAAGWQRVVPDGYERVATNTGFELYLNRETLAFKVLDRR CCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHCCCCEEEEECCCEEEEEEEECC SGYLWSSNLDEVTPEDRLNRSWTAFARSGISIEYMDSRANTRRASITNAAHELDITLINN CCEEECCCCCCCCCHHHCCCCHHHHHHCCCEEEEECCCCCCCHHHHCCCCCEEEEEEEEC GFRGQLTFTEPAITLTVQVTLTADGVQIEVPASGIVEGGSFRLAQLHLYPFFGATRAAQT CCEEEEEEECCEEEEEEEEEEEECCEEEEECCCCCEECCCEEEEEEEEEECCCCCHHHHC RGYMLIPDGSGSLITFAEQTNARTMFYGRYYGADLGMRGSFPNNPNSRPPYLLSAPVFGM CCEEEEECCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEE VHGEGQHAFLSILEHGSAYAELQAHPAGIITQFNFLYNLFIYNESYFQPTNRAGSGVTVI EECCCCHHHHHHHHCCCCEEEEECCCCHHHEEEEEEEEEEEEECCCCCCCCCCCCCEEEE QPQTNTFDIVQHYHFLTGREADYVGLARAYQRFLVDRGVLRAMPATQRDLPLRIEFLGAE CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEEECCC RERVLFWQRAIPMTTIAHMEEILASLPTQRVEATCYGWQPLGATAPQPLTLRIEGALGSR CCEEEEEHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCC NDLIALAQTITDRGGHLNLYLDPQAGIVDESGYTRNEVAMAINKAMLQGNHRGMQQLYLN CCHHHEEHHHHCCCCEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHEEC LPAVERRITALKTATRDYNLGLALDGIGFRLYSDFRNETRRNREAMIQAYQELLAENGPF CCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE ALYRPNAYLWHATRAYYDMPLGDSGYIYTSTSVPFLPIVLAGYIPYYGPALNFSANVEED EEECCCEEEEEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHH LLRHADYGAYPSFFLTHEPTAAMLKTNSNWLYTSAYAQWRDEIEKAYTWLAKLLGPVQGS HHHHCCCCCCCCEEEECCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC SIVARSAPFPGVSITDYANGKRIIVNYTTRQITLAGTTIPPRDAVLIERP CEEEECCCCCCCEEEECCCCCEEEEEEEEEEEEEEECCCCCCCCEEEECC >Mature Secondary Structure MDKIINILIVVTLFMTCQPVAQAAGWQRVVPDGYERVATNTGFELYLNRETLAFKVLDRR CCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHCCCCEEEEECCCEEEEEEEECC SGYLWSSNLDEVTPEDRLNRSWTAFARSGISIEYMDSRANTRRASITNAAHELDITLINN CCEEECCCCCCCCCHHHCCCCHHHHHHCCCEEEEECCCCCCCHHHHCCCCCEEEEEEEEC GFRGQLTFTEPAITLTVQVTLTADGVQIEVPASGIVEGGSFRLAQLHLYPFFGATRAAQT CCEEEEEEECCEEEEEEEEEEEECCEEEEECCCCCEECCCEEEEEEEEEECCCCCHHHHC RGYMLIPDGSGSLITFAEQTNARTMFYGRYYGADLGMRGSFPNNPNSRPPYLLSAPVFGM CCEEEEECCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEE VHGEGQHAFLSILEHGSAYAELQAHPAGIITQFNFLYNLFIYNESYFQPTNRAGSGVTVI EECCCCHHHHHHHHCCCCEEEEECCCCHHHEEEEEEEEEEEEECCCCCCCCCCCCCEEEE QPQTNTFDIVQHYHFLTGREADYVGLARAYQRFLVDRGVLRAMPATQRDLPLRIEFLGAE CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEEECCC RERVLFWQRAIPMTTIAHMEEILASLPTQRVEATCYGWQPLGATAPQPLTLRIEGALGSR CCEEEEEHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCC NDLIALAQTITDRGGHLNLYLDPQAGIVDESGYTRNEVAMAINKAMLQGNHRGMQQLYLN CCHHHEEHHHHCCCCEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHEEC LPAVERRITALKTATRDYNLGLALDGIGFRLYSDFRNETRRNREAMIQAYQELLAENGPF CCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE ALYRPNAYLWHATRAYYDMPLGDSGYIYTSTSVPFLPIVLAGYIPYYGPALNFSANVEED EEECCCEEEEEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHH LLRHADYGAYPSFFLTHEPTAAMLKTNSNWLYTSAYAQWRDEIEKAYTWLAKLLGPVQGS HHHHCCCCCCCCEEEECCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC SIVARSAPFPGVSITDYANGKRIIVNYTTRQITLAGTTIPPRDAVLIERP CEEEECCCCCCCEEEECCCCCEEEEEEEEEEEEEEECCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA