| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yesQ [H]
Identifier: 222527383
GI number: 222527383
Start: 5170829
End: 5171758
Strand: Direct
Name: yesQ [H]
Synonym: Chy400_4173
Alternate gene names: 222527383
Gene position: 5170829-5171758 (Clockwise)
Preceding gene: 222527382
Following gene: 222527384
Centisome position: 98.14
GC content: 51.61
Gene sequence:
>930_bases ATGCCACGGCTCCGCTTTGACTATCTATGGCGGATTTTGTGGGGAGTCCACAACCGGCCCGGCATCGTTCCGGTAAGCCT GTTGTACGCTGTTTTAACGGCAATCGGCTTTGTGTACCTCTACCCATTGCTGTTCATGGCGATTACCAGCTTCAAGAGTC CAGAGGATTTGTTGAATCCGATGGTGCAATGGGTACCGACACAGCTCTACCTGGGAAACTACATCAAGGCATGGCGCGTG CTCGATTACCTGGAAGCCTTGCGGGCGACCATTCTCGTCAGTATTGCGCCGACTACCCTCCAGGTCGTTGTCTGTGCGCT GATCGGCTACGGACTGGCCCGCTACCGGTTGTGGGGAAAATCGCTCCTCTTCGTGCTGATTTTTGCAACATTTGTGATCC CACCCCAGAACACCGTCATTCCCCAAATGCTTAATTATCGGTATCTGAACCTGTTGGGGAATGGTCTGGCTCTGCTGATT CCGGCAGCACTGGGCCAGGGCTTCAAGAGCGCAATCTTCATTCTCATCTTCTACCAGAACTTTCTCTCATTACCAAAGGC ACTTGAAGAGGCAGCCCGTCTTGATGGTGCATCGGATCTCGGTATCTTCTGGCGGATTGCCCTTCCCGGCGCAACCCCGG CATTTATTGTCTCGTTCGTCTTTTCGGTGGTCTGGTACTGGAACGAGACCTACCTGACCACCGTGTTTCTGGAAGGAGGG ATTCAGACACTCCCAATGCAGCTCGCCAAATTTACCCAGGCGTATGAAAACCTCTATCCATCGGGCATGGTTAATATGTT CGACCGCCTTAATGAAGCAGTCAAAATGAGTGGTACATTTCTGACCATTTTGCCACTGCTGATTCTGTACTTTATCTTGC AACGTTGGTTTGTCGAATCGATTGAACGATCAGGACTGGCCGGTGAATAA
Upstream 100 bases:
>100_bases GGACTGTTGATCGCGACATTTCTGGTTCTCCGTCCGCGTACCCGGGATTAAGCCAATGGATACCACCATCCGAACCCATA CCAGTAAAAGGCACCGGATC
Downstream 100 bases:
>100_bases ACTGCTTTTCTGGAATTTGCTGCTAGGGATCGCGTTATTGGTCACGGCGTGTTATGCACCGAATGAACAACGTCCAGTGC CAACGGCCAATCTCACGATC
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MPRLRFDYLWRILWGVHNRPGIVPVSLLYAVLTAIGFVYLYPLLFMAITSFKSPEDLLNPMVQWVPTQLYLGNYIKAWRV LDYLEALRATILVSIAPTTLQVVVCALIGYGLARYRLWGKSLLFVLIFATFVIPPQNTVIPQMLNYRYLNLLGNGLALLI PAALGQGFKSAIFILIFYQNFLSLPKALEEAARLDGASDLGIFWRIALPGATPAFIVSFVFSVVWYWNETYLTTVFLEGG IQTLPMQLAKFTQAYENLYPSGMVNMFDRLNEAVKMSGTFLTILPLLILYFILQRWFVESIERSGLAGE
Sequences:
>Translated_309_residues MPRLRFDYLWRILWGVHNRPGIVPVSLLYAVLTAIGFVYLYPLLFMAITSFKSPEDLLNPMVQWVPTQLYLGNYIKAWRV LDYLEALRATILVSIAPTTLQVVVCALIGYGLARYRLWGKSLLFVLIFATFVIPPQNTVIPQMLNYRYLNLLGNGLALLI PAALGQGFKSAIFILIFYQNFLSLPKALEEAARLDGASDLGIFWRIALPGATPAFIVSFVFSVVWYWNETYLTTVFLEGG IQTLPMQLAKFTQAYENLYPSGMVNMFDRLNEAVKMSGTFLTILPLLILYFILQRWFVESIERSGLAGE >Mature_308_residues PRLRFDYLWRILWGVHNRPGIVPVSLLYAVLTAIGFVYLYPLLFMAITSFKSPEDLLNPMVQWVPTQLYLGNYIKAWRVL DYLEALRATILVSIAPTTLQVVVCALIGYGLARYRLWGKSLLFVLIFATFVIPPQNTVIPQMLNYRYLNLLGNGLALLIP AALGQGFKSAIFILIFYQNFLSLPKALEEAARLDGASDLGIFWRIALPGATPAFIVSFVFSVVWYWNETYLTTVFLEGGI QTLPMQLAKFTQAYENLYPSGMVNMFDRLNEAVKMSGTFLTILPLLILYFILQRWFVESIERSGLAGE
Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0395
COG function: function code G; ABC-type sugar transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787571, Length=274, Percent_Identity=24.0875912408759, Blast_Score=73, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 35092; Mature: 34961
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLRFDYLWRILWGVHNRPGIVPVSLLYAVLTAIGFVYLYPLLFMAITSFKSPEDLLNP CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH MVQWVPTQLYLGNYIKAWRVLDYLEALRATILVSIAPTTLQVVVCALIGYGLARYRLWGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SLLFVLIFATFVIPPQNTVIPQMLNYRYLNLLGNGLALLIPAALGQGFKSAIFILIFYQN HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHH FLSLPKALEEAARLDGASDLGIFWRIALPGATPAFIVSFVFSVVWYWNETYLTTVFLEGG HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHEEECCC IQTLPMQLAKFTQAYENLYPSGMVNMFDRLNEAVKMSGTFLTILPLLILYFILQRWFVES HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH IERSGLAGE HHHCCCCCC >Mature Secondary Structure PRLRFDYLWRILWGVHNRPGIVPVSLLYAVLTAIGFVYLYPLLFMAITSFKSPEDLLNP CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH MVQWVPTQLYLGNYIKAWRVLDYLEALRATILVSIAPTTLQVVVCALIGYGLARYRLWGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SLLFVLIFATFVIPPQNTVIPQMLNYRYLNLLGNGLALLIPAALGQGFKSAIFILIFYQN HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHH FLSLPKALEEAARLDGASDLGIFWRIALPGATPAFIVSFVFSVVWYWNETYLTTVFLEGG HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHEEECCC IQTLPMQLAKFTQAYENLYPSGMVNMFDRLNEAVKMSGTFLTILPLLILYFILQRWFVES HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH IERSGLAGE HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]