Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is yesQ [H]

Identifier: 222527383

GI number: 222527383

Start: 5170829

End: 5171758

Strand: Direct

Name: yesQ [H]

Synonym: Chy400_4173

Alternate gene names: 222527383

Gene position: 5170829-5171758 (Clockwise)

Preceding gene: 222527382

Following gene: 222527384

Centisome position: 98.14

GC content: 51.61

Gene sequence:

>930_bases
ATGCCACGGCTCCGCTTTGACTATCTATGGCGGATTTTGTGGGGAGTCCACAACCGGCCCGGCATCGTTCCGGTAAGCCT
GTTGTACGCTGTTTTAACGGCAATCGGCTTTGTGTACCTCTACCCATTGCTGTTCATGGCGATTACCAGCTTCAAGAGTC
CAGAGGATTTGTTGAATCCGATGGTGCAATGGGTACCGACACAGCTCTACCTGGGAAACTACATCAAGGCATGGCGCGTG
CTCGATTACCTGGAAGCCTTGCGGGCGACCATTCTCGTCAGTATTGCGCCGACTACCCTCCAGGTCGTTGTCTGTGCGCT
GATCGGCTACGGACTGGCCCGCTACCGGTTGTGGGGAAAATCGCTCCTCTTCGTGCTGATTTTTGCAACATTTGTGATCC
CACCCCAGAACACCGTCATTCCCCAAATGCTTAATTATCGGTATCTGAACCTGTTGGGGAATGGTCTGGCTCTGCTGATT
CCGGCAGCACTGGGCCAGGGCTTCAAGAGCGCAATCTTCATTCTCATCTTCTACCAGAACTTTCTCTCATTACCAAAGGC
ACTTGAAGAGGCAGCCCGTCTTGATGGTGCATCGGATCTCGGTATCTTCTGGCGGATTGCCCTTCCCGGCGCAACCCCGG
CATTTATTGTCTCGTTCGTCTTTTCGGTGGTCTGGTACTGGAACGAGACCTACCTGACCACCGTGTTTCTGGAAGGAGGG
ATTCAGACACTCCCAATGCAGCTCGCCAAATTTACCCAGGCGTATGAAAACCTCTATCCATCGGGCATGGTTAATATGTT
CGACCGCCTTAATGAAGCAGTCAAAATGAGTGGTACATTTCTGACCATTTTGCCACTGCTGATTCTGTACTTTATCTTGC
AACGTTGGTTTGTCGAATCGATTGAACGATCAGGACTGGCCGGTGAATAA

Upstream 100 bases:

>100_bases
GGACTGTTGATCGCGACATTTCTGGTTCTCCGTCCGCGTACCCGGGATTAAGCCAATGGATACCACCATCCGAACCCATA
CCAGTAAAAGGCACCGGATC

Downstream 100 bases:

>100_bases
ACTGCTTTTCTGGAATTTGCTGCTAGGGATCGCGTTATTGGTCACGGCGTGTTATGCACCGAATGAACAACGTCCAGTGC
CAACGGCCAATCTCACGATC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MPRLRFDYLWRILWGVHNRPGIVPVSLLYAVLTAIGFVYLYPLLFMAITSFKSPEDLLNPMVQWVPTQLYLGNYIKAWRV
LDYLEALRATILVSIAPTTLQVVVCALIGYGLARYRLWGKSLLFVLIFATFVIPPQNTVIPQMLNYRYLNLLGNGLALLI
PAALGQGFKSAIFILIFYQNFLSLPKALEEAARLDGASDLGIFWRIALPGATPAFIVSFVFSVVWYWNETYLTTVFLEGG
IQTLPMQLAKFTQAYENLYPSGMVNMFDRLNEAVKMSGTFLTILPLLILYFILQRWFVESIERSGLAGE

Sequences:

>Translated_309_residues
MPRLRFDYLWRILWGVHNRPGIVPVSLLYAVLTAIGFVYLYPLLFMAITSFKSPEDLLNPMVQWVPTQLYLGNYIKAWRV
LDYLEALRATILVSIAPTTLQVVVCALIGYGLARYRLWGKSLLFVLIFATFVIPPQNTVIPQMLNYRYLNLLGNGLALLI
PAALGQGFKSAIFILIFYQNFLSLPKALEEAARLDGASDLGIFWRIALPGATPAFIVSFVFSVVWYWNETYLTTVFLEGG
IQTLPMQLAKFTQAYENLYPSGMVNMFDRLNEAVKMSGTFLTILPLLILYFILQRWFVESIERSGLAGE
>Mature_308_residues
PRLRFDYLWRILWGVHNRPGIVPVSLLYAVLTAIGFVYLYPLLFMAITSFKSPEDLLNPMVQWVPTQLYLGNYIKAWRVL
DYLEALRATILVSIAPTTLQVVVCALIGYGLARYRLWGKSLLFVLIFATFVIPPQNTVIPQMLNYRYLNLLGNGLALLIP
AALGQGFKSAIFILIFYQNFLSLPKALEEAARLDGASDLGIFWRIALPGATPAFIVSFVFSVVWYWNETYLTTVFLEGGI
QTLPMQLAKFTQAYENLYPSGMVNMFDRLNEAVKMSGTFLTILPLLILYFILQRWFVESIERSGLAGE

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=274, Percent_Identity=24.0875912408759, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35092; Mature: 34961

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLRFDYLWRILWGVHNRPGIVPVSLLYAVLTAIGFVYLYPLLFMAITSFKSPEDLLNP
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MVQWVPTQLYLGNYIKAWRVLDYLEALRATILVSIAPTTLQVVVCALIGYGLARYRLWGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SLLFVLIFATFVIPPQNTVIPQMLNYRYLNLLGNGLALLIPAALGQGFKSAIFILIFYQN
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHH
FLSLPKALEEAARLDGASDLGIFWRIALPGATPAFIVSFVFSVVWYWNETYLTTVFLEGG
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHEEECCC
IQTLPMQLAKFTQAYENLYPSGMVNMFDRLNEAVKMSGTFLTILPLLILYFILQRWFVES
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IERSGLAGE
HHHCCCCCC
>Mature Secondary Structure 
PRLRFDYLWRILWGVHNRPGIVPVSLLYAVLTAIGFVYLYPLLFMAITSFKSPEDLLNP
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MVQWVPTQLYLGNYIKAWRVLDYLEALRATILVSIAPTTLQVVVCALIGYGLARYRLWGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SLLFVLIFATFVIPPQNTVIPQMLNYRYLNLLGNGLALLIPAALGQGFKSAIFILIFYQN
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHH
FLSLPKALEEAARLDGASDLGIFWRIALPGATPAFIVSFVFSVVWYWNETYLTTVFLEGG
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHEEECCC
IQTLPMQLAKFTQAYENLYPSGMVNMFDRLNEAVKMSGTFLTILPLLILYFILQRWFVES
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IERSGLAGE
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]