| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527105
Identifier: 222527105
GI number: 222527105
Start: 4834828
End: 4836645
Strand: Direct
Name: 222527105
Synonym: Chy400_3886
Alternate gene names: NA
Gene position: 4834828-4836645 (Clockwise)
Preceding gene: 222527100
Following gene: 222527106
Centisome position: 91.76
GC content: 57.59
Gene sequence:
>1818_bases ATGCGCCTGGATGACCGGCTGGGAGCACAACCGCACAGCTTTTACGTTCTGAATAAGCGGCACCCGGTTGCTCCAGCAAC GTTCTATGGTATAGTATCTCCTGCTATGGAAGAATCAACCAATGGACGCATTGTTGCGGCATTACACGACTTTCAGCGCT TGCGCTGGCGTGCCGATATTGAGCATCTGCTGGCCCGTTTGCAAGGCCGGTCTGATGATTTGTTGCCGTTTGAAGAGGTG CGTCAACGTGTACACGCAAAACTGGCCGGTGAACGCCAACTGCGCGAGATTCCACTCAATGCGATTGTCGGCAGTGTTGG TCGTTATCACGACTTCAACCGCAGTTTTTTGCCACGCCGCGACGATAACTGGCAACGCTGGTCGCGGGTGATGGCAGCCG TTGACAGTTTGCACGGCTGGCCACCGATTGAAGTCTACCAGATTGGCGACGCCTACTTCGTTATCGATGGCAATCACCGC GTCTCTGTTGCCCGTCAGATGGGGATGAATCACATCCAGGCGTATGTTGTGCCATTGAAGGCACGAGCGCCAGTTGACCC GTCGATGACTCTGGAAGAGATCATTATTGCCGGTGAATACGCCGATTTTCTCGAAGCGACCCGCCTCGATGAATTACGCC CCGGCTGTGATTTGCGGGTCACGGTTGCCGGTCAGTACGATAAATTACGCCAGCAGATCGAGCACATTCAGCAGCGACTC ACGACAGCCGATCACACACCATCGCTCTCTGAAGCGGCATGCGTCTGGTACGATCAGGTCTATCGGCCAATAGCCGAACT GATCCACGAGCGCGGTCTGCTGCGCGATTTTCCCCAGCGCAGCACCACCGATCTCTATCTCTGGCTCTGCGATCACCGCG ATGAGCTGAGCAAACAGTTGGGCTGGGACATTAGCCTCACCCAGGCAATCGAAGACCTGACAGAGGCGCCAGGACGGGCT GAACAATTGCTTGACCGGATGATCCCCGACAACCTCGAACCGGCGGTTCCAGCCGGTGTCTGGCGACGAAACCGTACTCT CGATCCGGCATCCTGGCTCTTTCGCGAGGTGCTGGTGCCGGTAAACGGCACGCCGGATGGGTGGCAGGTTCTCGAACAGA TTCTGGCCTGGGCACAACGCGAGCCGATACGACCGCTCGGTATCCACGTGGTACGCAGTGTCAATCAACGCAATTCAGCA GCCGCTCAGGCGGTGGCCCGTGAGTTTATCGAACGCTGTGCTGCCGCCGGTGTCCACGGCGAGTGTGCGATTGACGTCGG TACTATCGACCGAATCATCCGCGAGCGTACACGCCTGGTCGATCTGGTAGCGATTCAGGTCAATCACCCACCCGGACGCT CGCCACTGGCCAGGCTGACGTCTGGTCTGCGCACTATTCTCCGCTGCTCGGTACGCCCGGTCTTAACGGTGCCGCGTGCG GTAGAGCATGTTGAGCGGCTGTTGCTGGCGTATGATGGTAGTCGCAAAGCTGAAGAAGCGTTGTACCTGGCCACGTACCT GGCCGCACGCTGGCAATTGTCACTCAATGTGGTCACTGTCCTTGAAGGAAAAGCTGAAGCGGAACAGGTGCGATTACGGG CATTTCGCTATCTCGAACGGTATAACATTGCCGCCGGTTATATCCTCGAACGGGGTGAACCGGCGGCAGCGATTATCCAT GCTGCCGAGCAGACCCGCAGTGATCTGGTGGTGATGGGAGGCTACGGTCATCGCGATCCGTTAAGTGATCTGGTGATCGG CTCGACCACCGAAGCTCTGCTGCGCAGCCGCCGGCTACCGACAATTATCTGCCAGTAA
Upstream 100 bases:
>100_bases CCGGCACGGAATGGCACTGACGATAGTCGGTAGCACTTCTCGCTGCGATACCGGCAGACTGAGAGCAAGATATACTGTCG TTGGCGATTGACAGGCGTGC
Downstream 100 bases:
>100_bases AATTCGTGCGCACCTTTTGGCATCTCTCAACGGTATATATAGTAGAGCCGTCATTTCAGCGCGAGGGATGCATGATCTCA CTACGAATCCACGAACAACC
Product: UspA domain-containing protein
Products: NA
Alternate protein names: UspA Domain Protein; UspA Domain-Containing Protein; Two Domain Fusion Protein; ParB Domain Protein Nuclease
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MRLDDRLGAQPHSFYVLNKRHPVAPATFYGIVSPAMEESTNGRIVAALHDFQRLRWRADIEHLLARLQGRSDDLLPFEEV RQRVHAKLAGERQLREIPLNAIVGSVGRYHDFNRSFLPRRDDNWQRWSRVMAAVDSLHGWPPIEVYQIGDAYFVIDGNHR VSVARQMGMNHIQAYVVPLKARAPVDPSMTLEEIIIAGEYADFLEATRLDELRPGCDLRVTVAGQYDKLRQQIEHIQQRL TTADHTPSLSEAACVWYDQVYRPIAELIHERGLLRDFPQRSTTDLYLWLCDHRDELSKQLGWDISLTQAIEDLTEAPGRA EQLLDRMIPDNLEPAVPAGVWRRNRTLDPASWLFREVLVPVNGTPDGWQVLEQILAWAQREPIRPLGIHVVRSVNQRNSA AAQAVAREFIERCAAAGVHGECAIDVGTIDRIIRERTRLVDLVAIQVNHPPGRSPLARLTSGLRTILRCSVRPVLTVPRA VEHVERLLLAYDGSRKAEEALYLATYLAARWQLSLNVVTVLEGKAEAEQVRLRAFRYLERYNIAAGYILERGEPAAAIIH AAEQTRSDLVVMGGYGHRDPLSDLVIGSTTEALLRSRRLPTIICQ
Sequences:
>Translated_605_residues MRLDDRLGAQPHSFYVLNKRHPVAPATFYGIVSPAMEESTNGRIVAALHDFQRLRWRADIEHLLARLQGRSDDLLPFEEV RQRVHAKLAGERQLREIPLNAIVGSVGRYHDFNRSFLPRRDDNWQRWSRVMAAVDSLHGWPPIEVYQIGDAYFVIDGNHR VSVARQMGMNHIQAYVVPLKARAPVDPSMTLEEIIIAGEYADFLEATRLDELRPGCDLRVTVAGQYDKLRQQIEHIQQRL TTADHTPSLSEAACVWYDQVYRPIAELIHERGLLRDFPQRSTTDLYLWLCDHRDELSKQLGWDISLTQAIEDLTEAPGRA EQLLDRMIPDNLEPAVPAGVWRRNRTLDPASWLFREVLVPVNGTPDGWQVLEQILAWAQREPIRPLGIHVVRSVNQRNSA AAQAVAREFIERCAAAGVHGECAIDVGTIDRIIRERTRLVDLVAIQVNHPPGRSPLARLTSGLRTILRCSVRPVLTVPRA VEHVERLLLAYDGSRKAEEALYLATYLAARWQLSLNVVTVLEGKAEAEQVRLRAFRYLERYNIAAGYILERGEPAAAIIH AAEQTRSDLVVMGGYGHRDPLSDLVIGSTTEALLRSRRLPTIICQ >Mature_605_residues MRLDDRLGAQPHSFYVLNKRHPVAPATFYGIVSPAMEESTNGRIVAALHDFQRLRWRADIEHLLARLQGRSDDLLPFEEV RQRVHAKLAGERQLREIPLNAIVGSVGRYHDFNRSFLPRRDDNWQRWSRVMAAVDSLHGWPPIEVYQIGDAYFVIDGNHR VSVARQMGMNHIQAYVVPLKARAPVDPSMTLEEIIIAGEYADFLEATRLDELRPGCDLRVTVAGQYDKLRQQIEHIQQRL TTADHTPSLSEAACVWYDQVYRPIAELIHERGLLRDFPQRSTTDLYLWLCDHRDELSKQLGWDISLTQAIEDLTEAPGRA EQLLDRMIPDNLEPAVPAGVWRRNRTLDPASWLFREVLVPVNGTPDGWQVLEQILAWAQREPIRPLGIHVVRSVNQRNSA AAQAVAREFIERCAAAGVHGECAIDVGTIDRIIRERTRLVDLVAIQVNHPPGRSPLARLTSGLRTILRCSVRPVLTVPRA VEHVERLLLAYDGSRKAEEALYLATYLAARWQLSLNVVTVLEGKAEAEQVRLRAFRYLERYNIAAGYILERGEPAAAIIH AAEQTRSDLVVMGGYGHRDPLSDLVIGSTTEALLRSRRLPTIICQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68588; Mature: 68588
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLDDRLGAQPHSFYVLNKRHPVAPATFYGIVSPAMEESTNGRIVAALHDFQRLRWRADI CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCHHHHCCCCCEEEEHHHHHHHHHHHHHH EHLLARLQGRSDDLLPFEEVRQRVHAKLAGERQLREIPLNAIVGSVGRYHDFNRSFLPRR HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCC DDNWQRWSRVMAAVDSLHGWPPIEVYQIGDAYFVIDGNHRVSVARQMGMNHIQAYVVPLK CCCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCHHHHHHHHCHHHHEEEEEEEE ARAPVDPSMTLEEIIIAGEYADFLEATRLDELRPGCDLRVTVAGQYDKLRQQIEHIQQRL CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH TTADHTPSLSEAACVWYDQVYRPIAELIHERGLLRDFPQRSTTDLYLWLCDHRDELSKQL HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEEECCHHHHHHHH GWDISLTQAIEDLTEAPGRAEQLLDRMIPDNLEPAVPAGVWRRNRTLDPASWLFREVLVP CCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCC VNGTPDGWQVLEQILAWAQREPIRPLGIHVVRSVNQRNSAAAQAVAREFIERCAAAGVHG CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ECAIDVGTIDRIIRERTRLVDLVAIQVNHPPGRSPLARLTSGLRTILRCSVRPVLTVPRA CEEEEHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH VEHVERLLLAYDGSRKAEEALYLATYLAARWQLSLNVVTVLEGKAEAEQVRLRAFRYLER HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHH YNIAAGYILERGEPAAAIIHAAEQTRSDLVVMGGYGHRDPLSDLVIGSTTEALLRSRRLP HCCHHHEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCHHHHHHHCCCC TIICQ EEECC >Mature Secondary Structure MRLDDRLGAQPHSFYVLNKRHPVAPATFYGIVSPAMEESTNGRIVAALHDFQRLRWRADI CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCHHHHCCCCCEEEEHHHHHHHHHHHHHH EHLLARLQGRSDDLLPFEEVRQRVHAKLAGERQLREIPLNAIVGSVGRYHDFNRSFLPRR HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCC DDNWQRWSRVMAAVDSLHGWPPIEVYQIGDAYFVIDGNHRVSVARQMGMNHIQAYVVPLK CCCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCHHHHHHHHCHHHHEEEEEEEE ARAPVDPSMTLEEIIIAGEYADFLEATRLDELRPGCDLRVTVAGQYDKLRQQIEHIQQRL CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH TTADHTPSLSEAACVWYDQVYRPIAELIHERGLLRDFPQRSTTDLYLWLCDHRDELSKQL HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEEECCHHHHHHHH GWDISLTQAIEDLTEAPGRAEQLLDRMIPDNLEPAVPAGVWRRNRTLDPASWLFREVLVP CCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCC VNGTPDGWQVLEQILAWAQREPIRPLGIHVVRSVNQRNSAAAQAVAREFIERCAAAGVHG CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ECAIDVGTIDRIIRERTRLVDLVAIQVNHPPGRSPLARLTSGLRTILRCSVRPVLTVPRA CEEEEHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH VEHVERLLLAYDGSRKAEEALYLATYLAARWQLSLNVVTVLEGKAEAEQVRLRAFRYLER HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHH YNIAAGYILERGEPAAAIIHAAEQTRSDLVVMGGYGHRDPLSDLVIGSTTEALLRSRRLP HCCHHHEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCHHHHHHHCCCC TIICQ EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA