| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yebA [H]
Identifier: 222527098
GI number: 222527098
Start: 4824305
End: 4826704
Strand: Reverse
Name: yebA [H]
Synonym: Chy400_3878
Alternate gene names: 222527098
Gene position: 4826704-4824305 (Counterclockwise)
Preceding gene: 222527099
Following gene: 222527089
Centisome position: 91.61
GC content: 59.04
Gene sequence:
>2400_bases ATGAACCGTTCTTCGTTGTCAGTTTCAACCAGTTCGCTGAACATCTGGTGGATGCTACCGGGTCTTGGGCTGATTGGGCT TTTAACCGGTGCGGTTATTCGTAGCCTGGCTATCTCCGGCTGGGCCACAGGTCTGTCGATTTTGCCCGCGGTCGGCACGA TGGCGTTCGTGGTTAGCCTGGTGTTGGTAAACTGGCAACGTCTTCATCGCTGGGCGGCCCACACGGTCTCGTTCCTGTTG GCGTGGGTCTGGATTGTGCAACAGGTCGGCCCCTTGCTCGATGAGCGCCTGACCAGTTGGCGCGATCAGGCTGCCGAGCT GGTGATTCGGATTATTGGCTGGGTCCGCGTGCTCGCCAGTGGTGGTCGTGGCGAAGATATTGTGCTGTTTGTTGTTGCAC TTGCCTTTCTTTCGTGGTGGCTGGTCTACGCAACAGTGTGGGCAGTCTTTCGCCAACGCCGTCCCTGGCTGCCTGTCATC GCGAACGGTACGGTATTTCTGGTTAACTATACCTATGTCCTGCCTAAACCGGATACAGAAGCACTGGTGTTGATTGCCTG TGCTTTGTTGCTGCTGGTGTATCACCACGTGATGCAGCGTCGAGCTGCCTGGGAAGCTCAACAGATCAATTATCCAGACC TGTTGCCCCTCCGCGCAATGTGGGCAGCAACAGTTGTGGGGGTAGTGCTCATCCTGCTAACGGCTTTTCTTCCCTCAACC ATTACCAGCGAACGTGCAGCGCAGACATGGGAGACGCTACGCATCCCGTTTCGCATGGCTCGTGCCGCGTGGGAAGATGC CTTTAGCACCATTAATGCCCCACCCGGTGCCGGGAGCATCTCGTTTACTGCCCGCACGGCGCCGCTCGGTGGGGCGCGAT CACCGGGTCTCGATCTAGTGATGACGGTACGCTCATCACGCCTTGAATACTGGCGAGCCGTTGCGTTTGATCGCTACGAC GGTTCGGGCTGGGTTAATACGACGGGGGAATTGGCTCGTTCGGCCCTGGGTGTCGCTACTGCCGAACAGGCGCGGACGCC ACTGGCTGCCGGTGAAACGCTGCCGGTGACTGATCGGCGAGCGCGGCGATTGATTACTCAAACGATCACGCTGGCCCAAG AGCGGAATGATGATCTGCTGTCTTTTGGTGGAACACCGGTGCAATTCAGCTTGCCGGCTCAGGTTGAGCACCTGGTTGGC CGTGACGAGAATGGCGGTATCACGCCGATTTACGATGATGTATCACTGGTCACCTCGCTGACGCCACTCAGTGCAGAAAC GACCTATACCGTGACGGCGTTGGTTTCGGTTGCTGATGTGCAGAGCCTGCGGAATGCCGGCACCGATTACCCGCAGTGGG TTCGGGAACGCTACCTGCAATTACCGCCTGACTTGCCGGCACGCGTGCGGGCTGAAGCAGCGCGGGTGATTGCCGCAGCT AATGCCGAAACACCCTACGATCAGGCGATTGCGATTCAGGATTACCTACGCCGCCTGACCTACAGCGAGGACATCCCTCC TCCACCCAGCAATGTTGATCTGGTCGACTGGTTCCTCTTCGAGCAGCGAGCCGGCTATTGCGACTACTTTGCCTCGGCGA TGGTGGTGATGCTGCGTTCGGTTGGGGTTCCGGCGCGGTGGGTGCGTGGCTACGCCAGTGGTGATTATGACCCAGAACAG GGTATCTACCTGGTACGCGAGAACGTTGCGCATAGCTGGCCCGAAGTCTACTTCCCCGGTATTGGCTGGGAACGGTTTGA GCTAACAGCGGCGAGTTATACCTCGCTTCCAGAGCGGCCTTTGCAATCAGCATTCGGTGAGGAAGAAGAGGGAGTTGCCG GCAGCTTCGGCGGCACCGTGCCCGACCCAGGTCGCTTCGAGGAGCTTGAGGACGATCTCACTGCCAGCGGTGTGAATAGT GGTGCTGCCAGCTCGACAGCAGCGAACAATCCCTCTGCGGCTGGCAGTAGCCTACTGACCGGCTGGTTCTCTGTGGTATT GGTTATACTGATGGGGATTGGCCTGATTATGCTCAGTGTCCGGTTGTGGCTTGCGCACGAATTGCGCGGTCTCCGCCTGT CTGCTGCGGCCTATGCAGAGATGGGCTGGCTGGCCAATATTGCCGGTCTGCCTCAACACCCCGCAGAGACGCCGGCGGAA TATGCACAACGTCTGGCACACCTGTTTCCTGAACACGCAACGACCATTCACGGTATCGCAACCGCCTACATTGCCGAGCG TTATCGCCGTGGTGCGGTGACCCGCGTGCCAACCGAAGACCGTCGTCAGGCATTGCGACGGGCACTGACTCGTTACGCCA TCCAAACCGCCTTCCAACGCCTCTGGCTGCCACTACGCCGGGGAGATCGCGTAGGGGCGGGTTCCAAACCTGCCCGGTAG
Upstream 100 bases:
>100_bases CTGAACTGCGTGGGCAGACGCTGGACGCTCTGGCACCACAGCTCTGGCAGAATACGTTACACGCATTTCCCCGTCTGTCC ACTGCTTTAGGATAGCAAGT
Downstream 100 bases:
>100_bases GGGCGGGTTCTCAACCCGCCCAGGGTTCTAAACCCACCGTGGGGTCTAAACCCGCCCAGGGTTCTCAGCCCGCCCCTGAC CGGCTGGTTTTCGGTGGTAC
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 799; Mature: 799
Protein sequence:
>799_residues MNRSSLSVSTSSLNIWWMLPGLGLIGLLTGAVIRSLAISGWATGLSILPAVGTMAFVVSLVLVNWQRLHRWAAHTVSFLL AWVWIVQQVGPLLDERLTSWRDQAAELVIRIIGWVRVLASGGRGEDIVLFVVALAFLSWWLVYATVWAVFRQRRPWLPVI ANGTVFLVNYTYVLPKPDTEALVLIACALLLLVYHHVMQRRAAWEAQQINYPDLLPLRAMWAATVVGVVLILLTAFLPST ITSERAAQTWETLRIPFRMARAAWEDAFSTINAPPGAGSISFTARTAPLGGARSPGLDLVMTVRSSRLEYWRAVAFDRYD GSGWVNTTGELARSALGVATAEQARTPLAAGETLPVTDRRARRLITQTITLAQERNDDLLSFGGTPVQFSLPAQVEHLVG RDENGGITPIYDDVSLVTSLTPLSAETTYTVTALVSVADVQSLRNAGTDYPQWVRERYLQLPPDLPARVRAEAARVIAAA NAETPYDQAIAIQDYLRRLTYSEDIPPPPSNVDLVDWFLFEQRAGYCDYFASAMVVMLRSVGVPARWVRGYASGDYDPEQ GIYLVRENVAHSWPEVYFPGIGWERFELTAASYTSLPERPLQSAFGEEEEGVAGSFGGTVPDPGRFEELEDDLTASGVNS GAASSTAANNPSAAGSSLLTGWFSVVLVILMGIGLIMLSVRLWLAHELRGLRLSAAAYAEMGWLANIAGLPQHPAETPAE YAQRLAHLFPEHATTIHGIATAYIAERYRRGAVTRVPTEDRRQALRRALTRYAIQTAFQRLWLPLRRGDRVGAGSKPAR
Sequences:
>Translated_799_residues MNRSSLSVSTSSLNIWWMLPGLGLIGLLTGAVIRSLAISGWATGLSILPAVGTMAFVVSLVLVNWQRLHRWAAHTVSFLL AWVWIVQQVGPLLDERLTSWRDQAAELVIRIIGWVRVLASGGRGEDIVLFVVALAFLSWWLVYATVWAVFRQRRPWLPVI ANGTVFLVNYTYVLPKPDTEALVLIACALLLLVYHHVMQRRAAWEAQQINYPDLLPLRAMWAATVVGVVLILLTAFLPST ITSERAAQTWETLRIPFRMARAAWEDAFSTINAPPGAGSISFTARTAPLGGARSPGLDLVMTVRSSRLEYWRAVAFDRYD GSGWVNTTGELARSALGVATAEQARTPLAAGETLPVTDRRARRLITQTITLAQERNDDLLSFGGTPVQFSLPAQVEHLVG RDENGGITPIYDDVSLVTSLTPLSAETTYTVTALVSVADVQSLRNAGTDYPQWVRERYLQLPPDLPARVRAEAARVIAAA NAETPYDQAIAIQDYLRRLTYSEDIPPPPSNVDLVDWFLFEQRAGYCDYFASAMVVMLRSVGVPARWVRGYASGDYDPEQ GIYLVRENVAHSWPEVYFPGIGWERFELTAASYTSLPERPLQSAFGEEEEGVAGSFGGTVPDPGRFEELEDDLTASGVNS GAASSTAANNPSAAGSSLLTGWFSVVLVILMGIGLIMLSVRLWLAHELRGLRLSAAAYAEMGWLANIAGLPQHPAETPAE YAQRLAHLFPEHATTIHGIATAYIAERYRRGAVTRVPTEDRRQALRRALTRYAIQTAFQRLWLPLRRGDRVGAGSKPAR >Mature_799_residues MNRSSLSVSTSSLNIWWMLPGLGLIGLLTGAVIRSLAISGWATGLSILPAVGTMAFVVSLVLVNWQRLHRWAAHTVSFLL AWVWIVQQVGPLLDERLTSWRDQAAELVIRIIGWVRVLASGGRGEDIVLFVVALAFLSWWLVYATVWAVFRQRRPWLPVI ANGTVFLVNYTYVLPKPDTEALVLIACALLLLVYHHVMQRRAAWEAQQINYPDLLPLRAMWAATVVGVVLILLTAFLPST ITSERAAQTWETLRIPFRMARAAWEDAFSTINAPPGAGSISFTARTAPLGGARSPGLDLVMTVRSSRLEYWRAVAFDRYD GSGWVNTTGELARSALGVATAEQARTPLAAGETLPVTDRRARRLITQTITLAQERNDDLLSFGGTPVQFSLPAQVEHLVG RDENGGITPIYDDVSLVTSLTPLSAETTYTVTALVSVADVQSLRNAGTDYPQWVRERYLQLPPDLPARVRAEAARVIAAA NAETPYDQAIAIQDYLRRLTYSEDIPPPPSNVDLVDWFLFEQRAGYCDYFASAMVVMLRSVGVPARWVRGYASGDYDPEQ GIYLVRENVAHSWPEVYFPGIGWERFELTAASYTSLPERPLQSAFGEEEEGVAGSFGGTVPDPGRFEELEDDLTASGVNS GAASSTAANNPSAAGSSLLTGWFSVVLVILMGIGLIMLSVRLWLAHELRGLRLSAAAYAEMGWLANIAGLPQHPAETPAE YAQRLAHLFPEHATTIHGIATAYIAERYRRGAVTRVPTEDRRQALRRALTRYAIQTAFQRLWLPLRRGDRVGAGSKPAR
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002931 [H]
Pfam domain/function: PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 87901; Mature: 87901
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSSLSVSTSSLNIWWMLPGLGLIGLLTGAVIRSLAISGWATGLSILPAVGTMAFVVSL CCCCCCEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVNWQRLHRWAAHTVSFLLAWVWIVQQVGPLLDERLTSWRDQAAELVIRIIGWVRVLAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGRGEDIVLFVVALAFLSWWLVYATVWAVFRQRRPWLPVIANGTVFLVNYTYVLPKPDTE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEEEEEEECCCCHH ALVLIACALLLLVYHHVMQRRAAWEAQQINYPDLLPLRAMWAATVVGVVLILLTAFLPST HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ITSERAAQTWETLRIPFRMARAAWEDAFSTINAPPGAGSISFTARTAPLGGARSPGLDLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEE MTVRSSRLEYWRAVAFDRYDGSGWVNTTGELARSALGVATAEQARTPLAAGETLPVTDRR HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH ARRLITQTITLAQERNDDLLSFGGTPVQFSLPAQVEHLVGRDENGGITPIYDDVSLVTSL HHHHHHHHHHHHHHCCCCHHHCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCHHHHHHC TPLSAETTYTVTALVSVADVQSLRNAGTDYPQWVRERYLQLPPDLPARVRAEAARVIAAA CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC NAETPYDQAIAIQDYLRRLTYSEDIPPPPSNVDLVDWFLFEQRAGYCDYFASAMVVMLRS CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH VGVPARWVRGYASGDYDPEQGIYLVRENVAHSWPEVYFPGIGWERFELTAASYTSLPERP CCCCHHHHHCCCCCCCCCCCCEEEEEHHHHCCCCCCEECCCCCCCEEEEHHHHCCCCCHH LQSAFGEEEEGVAGSFGGTVPDPGRFEELEDDLTASGVNSGAASSTAANNPSAAGSSLLT HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH GWFSVVLVILMGIGLIMLSVRLWLAHELRGLRLSAAAYAEMGWLANIAGLPQHPAETPAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCCCCCCCHHH YAQRLAHLFPEHATTIHGIATAYIAERYRRGAVTRVPTEDRRQALRRALTRYAIQTAFQR HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LWLPLRRGDRVGAGSKPAR HHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNRSSLSVSTSSLNIWWMLPGLGLIGLLTGAVIRSLAISGWATGLSILPAVGTMAFVVSL CCCCCCEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVNWQRLHRWAAHTVSFLLAWVWIVQQVGPLLDERLTSWRDQAAELVIRIIGWVRVLAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGRGEDIVLFVVALAFLSWWLVYATVWAVFRQRRPWLPVIANGTVFLVNYTYVLPKPDTE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEEEEEEECCCCHH ALVLIACALLLLVYHHVMQRRAAWEAQQINYPDLLPLRAMWAATVVGVVLILLTAFLPST HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ITSERAAQTWETLRIPFRMARAAWEDAFSTINAPPGAGSISFTARTAPLGGARSPGLDLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEE MTVRSSRLEYWRAVAFDRYDGSGWVNTTGELARSALGVATAEQARTPLAAGETLPVTDRR HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH ARRLITQTITLAQERNDDLLSFGGTPVQFSLPAQVEHLVGRDENGGITPIYDDVSLVTSL HHHHHHHHHHHHHHCCCCHHHCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCHHHHHHC TPLSAETTYTVTALVSVADVQSLRNAGTDYPQWVRERYLQLPPDLPARVRAEAARVIAAA CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC NAETPYDQAIAIQDYLRRLTYSEDIPPPPSNVDLVDWFLFEQRAGYCDYFASAMVVMLRS CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH VGVPARWVRGYASGDYDPEQGIYLVRENVAHSWPEVYFPGIGWERFELTAASYTSLPERP CCCCHHHHHCCCCCCCCCCCCEEEEEHHHHCCCCCCEECCCCCCCEEEEHHHHCCCCCHH LQSAFGEEEEGVAGSFGGTVPDPGRFEELEDDLTASGVNSGAASSTAANNPSAAGSSLLT HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH GWFSVVLVILMGIGLIMLSVRLWLAHELRGLRLSAAAYAEMGWLANIAGLPQHPAETPAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCCCCCCCHHH YAQRLAHLFPEHATTIHGIATAYIAERYRRGAVTRVPTEDRRQALRRALTRYAIQTAFQR HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LWLPLRRGDRVGAGSKPAR HHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]