| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526992
Identifier: 222526992
GI number: 222526992
Start: 4690150
End: 4691136
Strand: Direct
Name: 222526992
Synonym: Chy400_3770
Alternate gene names: NA
Gene position: 4690150-4691136 (Clockwise)
Preceding gene: 222526991
Following gene: 222526993
Centisome position: 89.01
GC content: 62.82
Gene sequence:
>987_bases ATGGTCACCGACCTGTCACTCCCCCAAATCGAACGCATTGTCACCCGCATCCTGCCGGGAACGCGGGTACGCGATGCTGC ACCACTCGGTGCGCGGAGCCTGCTGATCACGGCGACTGACCGTCAGTTTGTGCTACGGTTACCGGTCGGGGTAGATCAGT GGGCAGGGGAAGCGTTGCAAACTGAAGCGCTCGCGCTCCGTTCGTTACAGGCCGAGATCGATCTTCCCCTGCCATCAGTG TTGGGGATGACCCCTGCTGTTGCCGATGATCCACCGGCACTGGCCCTGAGTTATCTTGCCGGTACCCCACTCTCTGAAAT AATCACCGCCGTTGAGGAGGACGCGCGCTTTGCAATCGGCGAGGCGCTGGCAACGGTAATGACTCGTATCCACAGCTATC AGGCCCCACAGTACGGTCAAATCCACCCCGACAACCTGCCGACGCTGACCCCACAATCACCTGCCCCTGGGGCTGACGTG GCGTATCTGCGGCAGCGGGCAGCCACTGCCATCGATGCCGCCGTTGCCCAGGGCCGCATGACACCCGACCAGAGCGACTG GCTCCAGCGTCGGCTTGGCGAATGGCTGACCACCACCGCCCGCCCGGCCTGCCTGGTTCACGGCGATCTGCACCCGCGGC GGCTGATCGTGCGCCGGCGCGAACGGGACTGGCGTCTGGTTGGGGTGGTGGGATGGGGATTCGCCCAAACCTGGCGACCC GCCTGGGATCACGCGACGCTCCATCTCAACTTTGCCGACCCTGAGTACTTCGGTCTGCGCGTTGGCTACGGCGCAGCCTA CAACGAAACCACCGACCGTCGCTACGATCAGGTGCGCGAGTTTGCCCTCCTTCCCTACCGGCTCACCCTGTTGATCGAAC GTGAATGTGTCGATCTGGCGCTCAACATCGCCACCGGTCTGGATACCGTACAGGCACCACCTATCGTAGCGACACCCGAT ACACCTGGAGAGAACAGCGATGAATAA
Upstream 100 bases:
>100_bases ACCGAGATGAATACACCGGCAGAGATTGATCGGTTTGTAGCCGCATTGGCTGCCATATAGCAGGTCAGGCTTTGGCCTGT GTGCGACTGAGTTGAAGCGT
Downstream 100 bases:
>100_bases CGAGGAACCACCGATTTTTACCTATTCGCAGCCGGGCAAGATTGGCGTCAATCTACCGGCAGCCGGCGTGGCACCAACCC CGCTACCCGACGATCTGCTA
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MVTDLSLPQIERIVTRILPGTRVRDAAPLGARSLLITATDRQFVLRLPVGVDQWAGEALQTEALALRSLQAEIDLPLPSV LGMTPAVADDPPALALSYLAGTPLSEIITAVEEDARFAIGEALATVMTRIHSYQAPQYGQIHPDNLPTLTPQSPAPGADV AYLRQRAATAIDAAVAQGRMTPDQSDWLQRRLGEWLTTTARPACLVHGDLHPRRLIVRRRERDWRLVGVVGWGFAQTWRP AWDHATLHLNFADPEYFGLRVGYGAAYNETTDRRYDQVREFALLPYRLTLLIERECVDLALNIATGLDTVQAPPIVATPD TPGENSDE
Sequences:
>Translated_328_residues MVTDLSLPQIERIVTRILPGTRVRDAAPLGARSLLITATDRQFVLRLPVGVDQWAGEALQTEALALRSLQAEIDLPLPSV LGMTPAVADDPPALALSYLAGTPLSEIITAVEEDARFAIGEALATVMTRIHSYQAPQYGQIHPDNLPTLTPQSPAPGADV AYLRQRAATAIDAAVAQGRMTPDQSDWLQRRLGEWLTTTARPACLVHGDLHPRRLIVRRRERDWRLVGVVGWGFAQTWRP AWDHATLHLNFADPEYFGLRVGYGAAYNETTDRRYDQVREFALLPYRLTLLIERECVDLALNIATGLDTVQAPPIVATPD TPGENSDE >Mature_328_residues MVTDLSLPQIERIVTRILPGTRVRDAAPLGARSLLITATDRQFVLRLPVGVDQWAGEALQTEALALRSLQAEIDLPLPSV LGMTPAVADDPPALALSYLAGTPLSEIITAVEEDARFAIGEALATVMTRIHSYQAPQYGQIHPDNLPTLTPQSPAPGADV AYLRQRAATAIDAAVAQGRMTPDQSDWLQRRLGEWLTTTARPACLVHGDLHPRRLIVRRRERDWRLVGVVGWGFAQTWRP AWDHATLHLNFADPEYFGLRVGYGAAYNETTDRRYDQVREFALLPYRLTLLIERECVDLALNIATGLDTVQAPPIVATPD TPGENSDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36146; Mature: 36146
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTDLSLPQIERIVTRILPGTRVRDAAPLGARSLLITATDRQFVLRLPVGVDQWAGEALQ CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCHHHCCHHHH TEALALRSLQAEIDLPLPSVLGMTPAVADDPPALALSYLAGTPLSEIITAVEEDARFAIG HHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH EALATVMTRIHSYQAPQYGQIHPDNLPTLTPQSPAPGADVAYLRQRAATAIDAAVAQGRM HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC TPDQSDWLQRRLGEWLTTTARPACLVHGDLHPRRLIVRRRERDWRLVGVVGWGFAQTWRP CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEECCHHHHCCC AWDHATLHLNFADPEYFGLRVGYGAAYNETTDRRYDQVREFALLPYRLTLLIERECVDLA CCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEHHHHHHHH LNIATGLDTVQAPPIVATPDTPGENSDE HHHHHCCCCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure MVTDLSLPQIERIVTRILPGTRVRDAAPLGARSLLITATDRQFVLRLPVGVDQWAGEALQ CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCHHHCCHHHH TEALALRSLQAEIDLPLPSVLGMTPAVADDPPALALSYLAGTPLSEIITAVEEDARFAIG HHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH EALATVMTRIHSYQAPQYGQIHPDNLPTLTPQSPAPGADVAYLRQRAATAIDAAVAQGRM HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC TPDQSDWLQRRLGEWLTTTARPACLVHGDLHPRRLIVRRRERDWRLVGVVGWGFAQTWRP CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEECCHHHHCCC AWDHATLHLNFADPEYFGLRVGYGAAYNETTDRRYDQVREFALLPYRLTLLIERECVDLA CCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEHHHHHHHH LNIATGLDTVQAPPIVATPDTPGENSDE HHHHHCCCCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA