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The map label for this gene is ybeY [C]

Identifier: 222526810

GI number: 222526810

Start: 4460008

End: 4460472

Strand: Direct

Name: ybeY [C]

Synonym: Chy400_3584

Alternate gene names: 222526810

Gene position: 4460008-4460472 (Clockwise)

Preceding gene: 222526809

Following gene: 222526812

Centisome position: 84.65

GC content: 60.0

Gene sequence:

>465_bases
ATGATCTACACTATCGAAGTGCAACTGGATGAAGGTATCACCGCCGATAGCGAGCTGGTTGAACGCGCTGCGGCGGCAGT
GCTGGCCGCCGAGCAGATGCCGGAAGGCTGTGAGGTTGGAATTCGCATCACCACCGATGATGAGCTTCACCGTCTGAATC
GCGATTTTCGCGGGGTTGATGCGCCAACCGATGTTCTTTCGTTTGCCGATGATGGGCACGATAGCCGCTTTGTGGTCGCA
CCGGATCAGCCACGCTACCTCGGCGATATTGCGATCTCGTACCAGCGGGTCCTGGCCCAGGCCGCCGAGTACGGCCACAG
TCCGGCTCGCGAACTGGCGTATCTGACAGTGCATGGCGTTCTGCACCTGCTCGGCTACGACCACGAGCAAGGCCCCGCTG
AAGCGGCACGCATGCGTACCCGCGAAGAAGAGATCATGACTATCCTTGGTCTGCCACGCGAGTAG

Upstream 100 bases:

>100_bases
CGCTCGATGAAGCGCTCCAGCGGGTTTCATTCGAGCGGGAACGTGATGTGCTGTTGTTGGCCCGGCAGGCACTCTGTGAT
GCGAGCGGTAATGCAAAGGT

Downstream 100 bases:

>100_bases
TATCTGTTTCACGGATGATATTTGTGTTGGAATGGGGGTGGAAGGCATTCCTTCCGCCCTCATTGCATGTCACTCGCCTA
TCGCTGATTGCGGTTCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MIYTIEVQLDEGITADSELVERAAAAVLAAEQMPEGCEVGIRITTDDELHRLNRDFRGVDAPTDVLSFADDGHDSRFVVA
PDQPRYLGDIAISYQRVLAQAAEYGHSPARELAYLTVHGVLHLLGYDHEQGPAEAARMRTREEEIMTILGLPRE

Sequences:

>Translated_154_residues
MIYTIEVQLDEGITADSELVERAAAAVLAAEQMPEGCEVGIRITTDDELHRLNRDFRGVDAPTDVLSFADDGHDSRFVVA
PDQPRYLGDIAISYQRVLAQAAEYGHSPARELAYLTVHGVLHLLGYDHEQGPAEAARMRTREEEIMTILGLPRE
>Mature_154_residues
MIYTIEVQLDEGITADSELVERAAAAVLAAEQMPEGCEVGIRITTDDELHRLNRDFRGVDAPTDVLSFADDGHDSRFVVA
PDQPRYLGDIAISYQRVLAQAAEYGHSPARELAYLTVHGVLHLLGYDHEQGPAEAARMRTREEEIMTILGLPRE

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family

Homologues:

Organism=Escherichia coli, GI1786880, Length=98, Percent_Identity=43.8775510204082, Blast_Score=70, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RRMF_CHLAA (A9WJ51)

Other databases:

- EMBL:   CP000909
- RefSeq:   YP_001636899.1
- ProteinModelPortal:   A9WJ51
- SMR:   A9WJ51
- GeneID:   5825125
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_3323
- HOGENOM:   HBG734136
- OMA:   HGILHIT
- ProtClustDB:   CLSK974845
- HAMAP:   MF_00009
- InterPro:   IPR023091
- InterPro:   IPR020549
- InterPro:   IPR002036
- Gene3D:   G3DSA:3.40.390.30
- TIGRFAMs:   TIGR00043

Pfam domain/function: PF02130 UPF0054

EC number: NA

Molecular weight: Translated: 17073; Mature: 17073

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS01306 UPF0054

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYTIEVQLDEGITADSELVERAAAAVLAAEQMPEGCEVGIRITTDDELHRLNRDFRGVD
CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCC
APTDVLSFADDGHDSRFVVAPDQPRYLGDIAISYQRVLAQAAEYGHSPARELAYLTVHGV
CHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LHLLGYDHEQGPAEAARMRTREEEIMTILGLPRE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIYTIEVQLDEGITADSELVERAAAAVLAAEQMPEGCEVGIRITTDDELHRLNRDFRGVD
CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCC
APTDVLSFADDGHDSRFVVAPDQPRYLGDIAISYQRVLAQAAEYGHSPARELAYLTVHGV
CHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LHLLGYDHEQGPAEAARMRTREEEIMTILGLPRE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA