Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222526812
Identifier: 222526812
GI number: 222526812
Start: 4461042
End: 4461932
Strand: Direct
Name: 222526812
Synonym: Chy400_3586
Alternate gene names: NA
Gene position: 4461042-4461932 (Clockwise)
Preceding gene: 222526810
Following gene: 222526813
Centisome position: 84.67
GC content: 54.43
Gene sequence:
>891_bases ATGCCACTGCCTTTCATCCCTCTCATTTTGTTGGGTGGCTCGGTAATTGCCGGCATCAAGGGCGCCGTTGATACTTTCTC TGCCATTCAACAGATCAACGAACTACAAGAGGCGTACAACGAGCGACGAGCTGAATACGAAGAACGTAGAGCAGAGTACG AAAAAGCTCACAATCGCCTTGTTGTTCGTATGAATGAACTCAACGATCTGCGCCTGCGTGCATATGATACGATCAAAGAA GCTGCTGAGTTTCTGAAACGGGCAAAAGTCAAGAAGCGACATCTTGCTGAACGAATTGCCAGGCCGCGTCTGGAACAACC CGACAATTGGCAAGGTGCCCACGTTGATCCCATCGAGGCATTTCAGGCTGTGCTTAAAGCGGGTGGGGCCGGCACAGCAA CAGCCGCAACGGTCTACAGCACTGTTGGCACTTTGGGTGTCGCCTCAACCGGTACAGCGATCAGCACGTTGAGTGGAGCC GCTGCCACCAATGCGACACTGGCCTGGCTGGGTGGAGGTGCGCTGGCTGCCGGTGGTGGCGGGATGGCACTCGGTACGGC TGTGCTCGGCGGATTGGTTGCCGGTCCGGCCCTGTTGACTGCCGGTTTCTTCGCCCAGGGAACAGTTGCTCAGATTAAAA CTAAAGTCGAACGACAGATCGCAGAGATGGGAGCCGCTGAAGAGGAGATGCAAAATCGCATTGCTGAATACAAGGTTATT CAAGACCGTATCGAAGAGCTGGAGATGACGATCAAGCAGATGAACGCTACCCTGACCGACATGCTCGCCACTGCCGATCC GAACCGTGATCAAGACCTGTTTGAGATAGCAAGGGTTGCGAAGGGGCTGGCTGAGGCCATTGATGTGAAGACATTACCAC AGGCAGCCTGA
Upstream 100 bases:
>100_bases CTACGCTATTTTGATACTAATAGCCTATTGCTAACCATCCTTTCAGGCAGATACATTATGACCAGTATTCGTTCAGTTTT CATTGTTGCGGAGGAGACCA
Downstream 100 bases:
>100_bases GACAGAGGAATAACTATGAGCAATCCTGCACAGCATATTATTCGATACGCCGCTCGCCAGGTGCCCGCGCTCGACGCCAT CTCGGTCATTACCGCCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MPLPFIPLILLGGSVIAGIKGAVDTFSAIQQINELQEAYNERRAEYEERRAEYEKAHNRLVVRMNELNDLRLRAYDTIKE AAEFLKRAKVKKRHLAERIARPRLEQPDNWQGAHVDPIEAFQAVLKAGGAGTATAATVYSTVGTLGVASTGTAISTLSGA AATNATLAWLGGGALAAGGGGMALGTAVLGGLVAGPALLTAGFFAQGTVAQIKTKVERQIAEMGAAEEEMQNRIAEYKVI QDRIEELEMTIKQMNATLTDMLATADPNRDQDLFEIARVAKGLAEAIDVKTLPQAA
Sequences:
>Translated_296_residues MPLPFIPLILLGGSVIAGIKGAVDTFSAIQQINELQEAYNERRAEYEERRAEYEKAHNRLVVRMNELNDLRLRAYDTIKE AAEFLKRAKVKKRHLAERIARPRLEQPDNWQGAHVDPIEAFQAVLKAGGAGTATAATVYSTVGTLGVASTGTAISTLSGA AATNATLAWLGGGALAAGGGGMALGTAVLGGLVAGPALLTAGFFAQGTVAQIKTKVERQIAEMGAAEEEMQNRIAEYKVI QDRIEELEMTIKQMNATLTDMLATADPNRDQDLFEIARVAKGLAEAIDVKTLPQAA >Mature_295_residues PLPFIPLILLGGSVIAGIKGAVDTFSAIQQINELQEAYNERRAEYEERRAEYEKAHNRLVVRMNELNDLRLRAYDTIKEA AEFLKRAKVKKRHLAERIARPRLEQPDNWQGAHVDPIEAFQAVLKAGGAGTATAATVYSTVGTLGVASTGTAISTLSGAA ATNATLAWLGGGALAAGGGGMALGTAVLGGLVAGPALLTAGFFAQGTVAQIKTKVERQIAEMGAAEEEMQNRIAEYKVIQ DRIEELEMTIKQMNATLTDMLATADPNRDQDLFEIARVAKGLAEAIDVKTLPQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31585; Mature: 31453
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPFIPLILLGGSVIAGIKGAVDTFSAIQQINELQEAYNERRAEYEERRAEYEKAHNRL CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE VVRMNELNDLRLRAYDTIKEAAEFLKRAKVKKRHLAERIARPRLEQPDNWQGAHVDPIEA EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH FQAVLKAGGAGTATAATVYSTVGTLGVASTGTAISTLSGAAATNATLAWLGGGALAAGGG HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHCCCEEEEECCCCEECCCC GMALGTAVLGGLVAGPALLTAGFFAQGTVAQIKTKVERQIAEMGAAEEEMQNRIAEYKVI HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QDRIEELEMTIKQMNATLTDMLATADPNRDQDLFEIARVAKGLAEAIDVKTLPQAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PLPFIPLILLGGSVIAGIKGAVDTFSAIQQINELQEAYNERRAEYEERRAEYEKAHNRL CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE VVRMNELNDLRLRAYDTIKEAAEFLKRAKVKKRHLAERIARPRLEQPDNWQGAHVDPIEA EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH FQAVLKAGGAGTATAATVYSTVGTLGVASTGTAISTLSGAAATNATLAWLGGGALAAGGG HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHCCCEEEEECCCCEECCCC GMALGTAVLGGLVAGPALLTAGFFAQGTVAQIKTKVERQIAEMGAAEEEMQNRIAEYKVI HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QDRIEELEMTIKQMNATLTDMLATADPNRDQDLFEIARVAKGLAEAIDVKTLPQAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA