| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526800
Identifier: 222526800
GI number: 222526800
Start: 4451979
End: 4452782
Strand: Direct
Name: 222526800
Synonym: Chy400_3574
Alternate gene names: NA
Gene position: 4451979-4452782 (Clockwise)
Preceding gene: 222526799
Following gene: 222526801
Centisome position: 84.49
GC content: 56.22
Gene sequence:
>804_bases ATGTCTGGAATTATTGATTTTTATCGGGCCGCGATGAAACAGGCAATCCTGGTGCAATTTCAGTATCGGGCGGCCAACTA TTTCTACATAATCGGCATGATCAGCGAGCCGATCATCTATCTGGTGGTCTGGAGTGTGGTTGCGGCTGCGCAGGGTGGGA CGGTCGGCGGGTACGATGCCGGTGCTTTCGCCGCCTACTATATCGTCTGGACGCTGGTACGCAATATGAATATCGTCTTT ACGCCATACGGTTGGGAGCAGCGGATTCGCACCGGTGAGTTGTCGGCAGTGCTCTTGCGTCCACTGCATCCATTGCACTA CGACATCGCCTTTTTTGCCGGCTGGAAGGTGGTCGTCATTCTGTTCTGGTTGCCGATTGCCGCAGTGCTGGCGTGGCTCT TCCGGCCAACCCTTGCCCCAACCTGGCTTGAGATCGCAGTATTTGCCGTCGCCATCTGGGGTGCATTTCTCATCCGTATG ATGTTTCTCTGGTTGCTGGGCCTGATTTCCTTCTGGACGACCCGCGTGGCGGCGATCTACGAACTCTTCTTTGCCTTTGA ATTGTTTCTTTCCGGGCGCATCGCACCGCTGGCGCTCTTCCCTGAGTGGGCGCGCACACTGGCCGATTGGCTGCCATTTC GCTGGACGTTTGGTTTTCCCATCGAGGCTCTGATTGGGCAATTAAGTGTCGCCGGCTTGATCGGTGGCCTGGCGATGCAG GCATTCTGGATACTCCTCGGTTTGGGACTGGTGCTACTGGTCTGGCGTCGTGCTGTGCAACGCTACACGGCGGTTGGTGG TTAA
Upstream 100 bases:
>100_bases ACCCGTTGCTGATGTGACGGTTGAGGAACCGCCGATTGATGATGTTATTGAGCAGGTGTTTGCGGTAGGTGCGAGTCATT AAGACCGGCAAAGGCGACAT
Downstream 100 bases:
>100_bases GCAAGGTGTTGTATAGCAGAGAGATGAAGGGCGTGGTATGGAGCTGGTGCGCTTAATTGCCATCTTTGCCCGGGTTGGCA TCCTCAACGAGATGCAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter Inner Membrane Subunit; ABC Transporter Permease; ABC-2 Type Transport System Permease Protein; Multidrug ABC Transporter; Abc Transporter Permease Protein; ABC Transporter Permease Protein; ABC-Type Transport System Permease Component-Like; Integral Membrane Protein
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSGIIDFYRAAMKQAILVQFQYRAANYFYIIGMISEPIIYLVVWSVVAAAQGGTVGGYDAGAFAAYYIVWTLVRNMNIVF TPYGWEQRIRTGELSAVLLRPLHPLHYDIAFFAGWKVVVILFWLPIAAVLAWLFRPTLAPTWLEIAVFAVAIWGAFLIRM MFLWLLGLISFWTTRVAAIYELFFAFELFLSGRIAPLALFPEWARTLADWLPFRWTFGFPIEALIGQLSVAGLIGGLAMQ AFWILLGLGLVLLVWRRAVQRYTAVGG
Sequences:
>Translated_267_residues MSGIIDFYRAAMKQAILVQFQYRAANYFYIIGMISEPIIYLVVWSVVAAAQGGTVGGYDAGAFAAYYIVWTLVRNMNIVF TPYGWEQRIRTGELSAVLLRPLHPLHYDIAFFAGWKVVVILFWLPIAAVLAWLFRPTLAPTWLEIAVFAVAIWGAFLIRM MFLWLLGLISFWTTRVAAIYELFFAFELFLSGRIAPLALFPEWARTLADWLPFRWTFGFPIEALIGQLSVAGLIGGLAMQ AFWILLGLGLVLLVWRRAVQRYTAVGG >Mature_266_residues SGIIDFYRAAMKQAILVQFQYRAANYFYIIGMISEPIIYLVVWSVVAAAQGGTVGGYDAGAFAAYYIVWTLVRNMNIVFT PYGWEQRIRTGELSAVLLRPLHPLHYDIAFFAGWKVVVILFWLPIAAVLAWLFRPTLAPTWLEIAVFAVAIWGAFLIRMM FLWLLGLISFWTTRVAAIYELFFAFELFLSGRIAPLALFPEWARTLADWLPFRWTFGFPIEALIGQLSVAGLIGGLAMQA FWILLGLGLVLLVWRRAVQRYTAVGG
Specific function: Unknown
COG id: COG4587
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30234; Mature: 30103
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGIIDFYRAAMKQAILVQFQYRAANYFYIIGMISEPIIYLVVWSVVAAAQGGTVGGYDA CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCH GAFAAYYIVWTLVRNMNIVFTPYGWEQRIRTGELSAVLLRPLHPLHYDIAFFAGWKVVVI HHHHHHHHHHHHHHCCCEEECCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH LFWLPIAAVLAWLFRPTLAPTWLEIAVFAVAIWGAFLIRMMFLWLLGLISFWTTRVAAIY HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELFFAFELFLSGRIAPLALFPEWARTLADWLPFRWTFGFPIEALIGQLSVAGLIGGLAMQ HHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHH AFWILLGLGLVLLVWRRAVQRYTAVGG HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SGIIDFYRAAMKQAILVQFQYRAANYFYIIGMISEPIIYLVVWSVVAAAQGGTVGGYDA CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCH GAFAAYYIVWTLVRNMNIVFTPYGWEQRIRTGELSAVLLRPLHPLHYDIAFFAGWKVVVI HHHHHHHHHHHHHHCCCEEECCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH LFWLPIAAVLAWLFRPTLAPTWLEIAVFAVAIWGAFLIRMMFLWLLGLISFWTTRVAAIY HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELFFAFELFLSGRIAPLALFPEWARTLADWLPFRWTFGFPIEALIGQLSVAGLIGGLAMQ HHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHH AFWILLGLGLVLLVWRRAVQRYTAVGG HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA