BacMap

Definition	Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession	NC_012032
Length	5,268,950

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The map label for this gene is natA [H]

Identifier: 222526799

GI number: 222526799

Start: 4450968

End: 4451960

Strand: Direct

Name: natA [H]

Synonym: Chy400_3573

Alternate gene names: 222526799

Gene position: 4450968-4451960 (Clockwise)

Preceding gene: 222526798

Following gene: 222526800

Centisome position: 84.48

GC content: 56.5

Gene sequence:

>993_bases
ATGAACGTAGCCACCGAACCGGCCATTGTTGTCCATCAATTGAGCAAAATCTACGAGGTTCCTGAGCGTGATCCGGGTTT
ACTGGCCGCAGTGCGTAGCCTGTTTCGGCGACGGGTGCGTGCCATCCCGGCGGTGTCCGCTGTCAGTTTCACCATTCAAC
CGGGTGAAGTGGTTGGATTTCTCGGTCCGAATGGGGCCGGGAAAACTACCACCCTCAAGATGCTGACCGGCCTGCTCCAT
CCAACCGCCGGTGATGTGCGTGTCTTCGGCTACATTCCGTCTCGCCGCGAACCGGCTTTCTTGCGCCGGATTACGCTGGT
GATGGGTAATCGCAATCAGTTACAGTGGGACCTTCCGGCACTCGATTCGTTTGAGCTACTGCGGGCAATCTATCGCTTAC
CACCGGCAGCATTTCGGGCGACTCGTGATGAATTGATTGAGTTGCTCGAAGTTGGCCATCTGGTGCGCAAACCGGTGCGT
AATCTTTCGCTCGGTGAGCGTATGAAGATGGAGATTATCGGCGCGCTGCTGCACCGTCCACAGGCATTGTTTCTCGATGA
ACCGACCCTCGGCCTCGACGTAACAATGCAGCGGCGGATTCGGGCGTTTGTGGCCGAATACAATCGGCGTACCGGAGCAA
CAGTATTGCTCACCAGTCACTATATGGCGGATGTCGAGGCTCTCTGTCGGCGGGTAATTGTGATCCATCACGGGCAAGTC
CTCTTCGACGGGCCACTGCACAATCTGGTCGATCAGTTTGCTGCCTATCGCAAACTGATTGTGACCCTCAGCGAAAGTGG
GAGCGATCTATCCCGCTTCGGTGAGGTGATCGATCAGGATGGCCTGCGGTACACCTTGCGCATCCCGAAAGCGACAGCTC
CGGCGGTGACGGCCCGGATTCTGGCTGAAGTACCCGTTGCTGATGTGACGGTTGAGGAACCGCCGATTGATGATGTTATT
GAGCAGGTGTTTGCGGTAGGTGCGAGTCATTAA

Upstream 100 bases:

>100_bases
CAGGTGCCGCGATTGCGCATTTTGCCGCTACCCTTCACCGATCCGTACCCTCAACTGCAAGGTAAAAGACGATACCCAAT
CAGGCATCGGGAGATATTGT

Downstream 100 bases:

>100_bases
GACCGGCAAAGGCGACATATGTCTGGAATTATTGATTTTTATCGGGCCGCGATGAAACAGGCAATCCTGGTGCAATTTCA
GTATCGGGCGGCCAACTATT

Product: ABC transporter-like protein

Products: NA

Alternate protein names: Na(+) ABC transporter [H]

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MNVATEPAIVVHQLSKIYEVPERDPGLLAAVRSLFRRRVRAIPAVSAVSFTIQPGEVVGFLGPNGAGKTTTLKMLTGLLH
PTAGDVRVFGYIPSRREPAFLRRITLVMGNRNQLQWDLPALDSFELLRAIYRLPPAAFRATRDELIELLEVGHLVRKPVR
NLSLGERMKMEIIGALLHRPQALFLDEPTLGLDVTMQRRIRAFVAEYNRRTGATVLLTSHYMADVEALCRRVIVIHHGQV
LFDGPLHNLVDQFAAYRKLIVTLSESGSDLSRFGEVIDQDGLRYTLRIPKATAPAVTARILAEVPVADVTVEEPPIDDVI
EQVFAVGASH

Sequences:

>Translated_330_residues
MNVATEPAIVVHQLSKIYEVPERDPGLLAAVRSLFRRRVRAIPAVSAVSFTIQPGEVVGFLGPNGAGKTTTLKMLTGLLH
PTAGDVRVFGYIPSRREPAFLRRITLVMGNRNQLQWDLPALDSFELLRAIYRLPPAAFRATRDELIELLEVGHLVRKPVR
NLSLGERMKMEIIGALLHRPQALFLDEPTLGLDVTMQRRIRAFVAEYNRRTGATVLLTSHYMADVEALCRRVIVIHHGQV
LFDGPLHNLVDQFAAYRKLIVTLSESGSDLSRFGEVIDQDGLRYTLRIPKATAPAVTARILAEVPVADVTVEEPPIDDVI
EQVFAVGASH
>Mature_330_residues
MNVATEPAIVVHQLSKIYEVPERDPGLLAAVRSLFRRRVRAIPAVSAVSFTIQPGEVVGFLGPNGAGKTTTLKMLTGLLH
PTAGDVRVFGYIPSRREPAFLRRITLVMGNRNQLQWDLPALDSFELLRAIYRLPPAAFRATRDELIELLEVGHLVRKPVR
NLSLGERMKMEIIGALLHRPQALFLDEPTLGLDVTMQRRIRAFVAEYNRRTGATVLLTSHYMADVEALCRRVIVIHHGQV
LFDGPLHNLVDQFAAYRKLIVTLSESGSDLSRFGEVIDQDGLRYTLRIPKATAPAVTARILAEVPVADVTVEEPPIDDVI
EQVFAVGASH

Specific function: Involved in ATP-dependent electrogenic sodium extrusion [H]

COG id: COG4586

COG function: function code R; ABC-type uncharacterized transport system, ATPase component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27477115, Length=224, Percent_Identity=33.4821428571429, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI27436953, Length=285, Percent_Identity=28.0701754385965, Blast_Score=111, Evalue=7e-25,
Organism=Homo sapiens, GI153792144, Length=265, Percent_Identity=30.188679245283, Blast_Score=111, Evalue=8e-25,
Organism=Homo sapiens, GI27262624, Length=308, Percent_Identity=27.9220779220779, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI27262626, Length=308, Percent_Identity=27.9220779220779, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI6005701, Length=264, Percent_Identity=29.1666666666667, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI45446740, Length=245, Percent_Identity=32.2448979591837, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI47078218, Length=245, Percent_Identity=32.2448979591837, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI116734710, Length=275, Percent_Identity=32, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI150417984, Length=277, Percent_Identity=29.2418772563177, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI21536376, Length=252, Percent_Identity=30.952380952381, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI27881501, Length=225, Percent_Identity=28.4444444444444, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI30795238, Length=225, Percent_Identity=28.4444444444444, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI105990541, Length=250, Percent_Identity=30.4, Blast_Score=88, Evalue=9e-18,
Organism=Homo sapiens, GI31657092, Length=223, Percent_Identity=28.6995515695067, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI73747915, Length=209, Percent_Identity=27.7511961722488, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI9665248, Length=225, Percent_Identity=25.7777777777778, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI11967969, Length=216, Percent_Identity=27.3148148148148, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI73747917, Length=167, Percent_Identity=29.3413173652695, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI48994943, Length=218, Percent_Identity=33.0275229357798, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1786319, Length=222, Percent_Identity=28.8288288288288, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI87081782, Length=241, Percent_Identity=28.6307053941909, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1789593, Length=227, Percent_Identity=32.15859030837, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1788165, Length=210, Percent_Identity=30.4761904761905, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI87081791, Length=300, Percent_Identity=26, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1786398, Length=218, Percent_Identity=29.3577981651376, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1790190, Length=211, Percent_Identity=31.7535545023697, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788761, Length=200, Percent_Identity=29, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1787712, Length=197, Percent_Identity=26.9035532994924, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789864, Length=230, Percent_Identity=30.4347826086957, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1789873, Length=218, Percent_Identity=32.1100917431193, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787759, Length=224, Percent_Identity=30.8035714285714, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1790467, Length=218, Percent_Identity=28.4403669724771, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1788506, Length=227, Percent_Identity=29.5154185022026, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI87081834, Length=190, Percent_Identity=30.5263157894737, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87081709, Length=219, Percent_Identity=23.7442922374429, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789891, Length=211, Percent_Identity=27.0142180094787, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI145693107, Length=284, Percent_Identity=28.8732394366197, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1790525, Length=216, Percent_Identity=24.0740740740741, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1786253, Length=213, Percent_Identity=25.8215962441315, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787758, Length=218, Percent_Identity=27.5229357798165, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786345, Length=208, Percent_Identity=28.8461538461538, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787112, Length=225, Percent_Identity=29.3333333333333, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787370, Length=224, Percent_Identity=24.5535714285714, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1786703, Length=200, Percent_Identity=28, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI87082267, Length=203, Percent_Identity=25.1231527093596, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1786803, Length=209, Percent_Identity=27.7511961722488, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1788897, Length=220, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1787500, Length=235, Percent_Identity=24.6808510638298, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789991, Length=232, Percent_Identity=28.448275862069, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788450, Length=289, Percent_Identity=25.9515570934256, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1789751, Length=216, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1788210, Length=221, Percent_Identity=28.0542986425339, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI48995001, Length=204, Percent_Identity=25.9803921568627, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788053, Length=191, Percent_Identity=27.7486910994764, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI2367384, Length=235, Percent_Identity=25.531914893617, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI1787792, Length=211, Percent_Identity=27.9620853080569, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=356, Percent_Identity=27.247191011236, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17510237, Length=263, Percent_Identity=27.3764258555133, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71983523, Length=222, Percent_Identity=28.8288288288288, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI71983516, Length=224, Percent_Identity=28.125, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71983510, Length=224, Percent_Identity=28.125, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI193202878, Length=209, Percent_Identity=27.7511961722488, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17565586, Length=243, Percent_Identity=27.9835390946502, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71992290, Length=233, Percent_Identity=27.8969957081545, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=243, Percent_Identity=26.3374485596708, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17552232, Length=238, Percent_Identity=29.4117647058824, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=281, Percent_Identity=24.5551601423488, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6319856, Length=217, Percent_Identity=26.7281105990783, Blast_Score=70, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24666092, Length=235, Percent_Identity=29.7872340425532, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24643674, Length=214, Percent_Identity=30.3738317757009, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI221512771, Length=242, Percent_Identity=28.5123966942149, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI221500365, Length=245, Percent_Identity=29.7959183673469, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI116007184, Length=245, Percent_Identity=29.7959183673469, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI116007328, Length=210, Percent_Identity=30, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28574150, Length=210, Percent_Identity=30, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28573573, Length=220, Percent_Identity=29.0909090909091, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28573571, Length=220, Percent_Identity=29.0909090909091, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24582014, Length=257, Percent_Identity=23.7354085603113, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24582012, Length=257, Percent_Identity=23.7354085603113, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24650855, Length=205, Percent_Identity=24.8780487804878, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24650853, Length=205, Percent_Identity=24.8780487804878, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281362751, Length=274, Percent_Identity=23.7226277372263, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI28571209, Length=242, Percent_Identity=23.5537190082645, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281363262, Length=211, Percent_Identity=25.5924170616114, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45552199, Length=224, Percent_Identity=29.4642857142857, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24653245, Length=211, Percent_Identity=25.5924170616114, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581407, Length=224, Percent_Identity=29.4642857142857, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI85725262, Length=197, Percent_Identity=26.3959390862944, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI19920532, Length=217, Percent_Identity=27.1889400921659, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580930, Length=217, Percent_Identity=27.1889400921659, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24641565, Length=225, Percent_Identity=28, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 36640; Mature: 36640

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVATEPAIVVHQLSKIYEVPERDPGLLAAVRSLFRRRVRAIPAVSAVSFTIQPGEVVGF
CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHEEEEECCCCEEEE
LGPNGAGKTTTLKMLTGLLHPTAGDVRVFGYIPSRREPAFLRRITLVMGNRNQLQWDLPA
ECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEECCCC
LDSFELLRAIYRLPPAAFRATRDELIELLEVGHLVRKPVRNLSLGERMKMEIIGALLHRP
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
QALFLDEPTLGLDVTMQRRIRAFVAEYNRRTGATVLLTSHYMADVEALCRRVIVIHHGQV
CEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHEECCCE
LFDGPLHNLVDQFAAYRKLIVTLSESGSDLSRFGEVIDQDGLRYTLRIPKATAPAVTARI
EECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH
LAEVPVADVTVEEPPIDDVIEQVFAVGASH
HHHCCCCCEEECCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNVATEPAIVVHQLSKIYEVPERDPGLLAAVRSLFRRRVRAIPAVSAVSFTIQPGEVVGF
CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHEEEEECCCCEEEE
LGPNGAGKTTTLKMLTGLLHPTAGDVRVFGYIPSRREPAFLRRITLVMGNRNQLQWDLPA
ECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEECCCC
LDSFELLRAIYRLPPAAFRATRDELIELLEVGHLVRKPVRNLSLGERMKMEIIGALLHRP
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
QALFLDEPTLGLDVTMQRRIRAFVAEYNRRTGATVLLTSHYMADVEALCRRVIVIHHGQV
CEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHEECCCE
LFDGPLHNLVDQFAAYRKLIVTLSESGSDLSRFGEVIDQDGLRYTLRIPKATAPAVTARI
EECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH
LAEVPVADVTVEEPPIDDVIEQVFAVGASH
HHHCCCCCEEECCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9106203; 9274031; 9384377 [H]