Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222526801

Identifier: 222526801

GI number: 222526801

Start: 4452820

End: 4453605

Strand: Direct

Name: 222526801

Synonym: Chy400_3575

Alternate gene names: NA

Gene position: 4452820-4453605 (Clockwise)

Preceding gene: 222526800

Following gene: 222526808

Centisome position: 84.51

GC content: 55.6

Gene sequence:

>786_bases
ATGGAGCTGGTGCGCTTAATTGCCATCTTTGCCCGGGTTGGCATCCTCAACGAGATGCAATACCGGGTTAATTTCTTCTT
CCAGATGCTGGAGTCGGCGATTAGTCTGGCGACCGGACTGATCGGTCTGGGGCTGGTCTTTCAACACACCACCATTCTGG
CCGGTTGGCAACCGGCGGAATTGCTGGTCGTGATGGGGATTTACGTGCTGATGAGTGGCATCGTGCAGGCGGTGATTCAG
CCGAATATGTTGCGGCTGGCGCAGGATGTGCTTGAGGGCAAGCTCGATTATGCCCTCACGAAACCGGTCGATAGCCAGTT
GCTGGTGAGTATTCGGGAATGGCAGGCGTGGCGCTTTACCAATGTCGTATTGGGCTTGCTGGTCGTCGGATGGGCGCTCG
TCTCTTTGCAGGCAAGTGTCAGTTTAGGGCAGATCGTGCTCTTTGTCCTTATGCTGGGCTGTGGGGTAGTGGCGCTCTAT
GCTTTCTGGCTGATTCTGGCCACGACCAGTTTTTGGGTCATTCAGATCGAAAGTTTGATCAATTTGTTTGAAGGTATTTT
TGCCGCCGGACGCTGGCCGACCAGTATCTACCCTGGCTGGTTGCGCGCAATCCTGACCTTTCTGGTGCCGGTTGCGTTTG
CAGTCACCGTTCCGGCAGAAGCGCTTACCGCTCGTTTGAACAGTTCAACGCTGGCGTTAGCGGTTGGCGTGAGTTTCACC
CTCTTCTTGCTGGCGCGTCTGCTATGGCGATGGGGTGTCCGTCGCTATAGTGGTGCCAGTGCCTGA

Upstream 100 bases:

>100_bases
TTGGGACTGGTGCTACTGGTCTGGCGTCGTGCTGTGCAACGCTACACGGCGGTTGGTGGTTAAGCAAGGTGTTGTATAGC
AGAGAGATGAAGGGCGTGGT

Downstream 100 bases:

>100_bases
AGCCATCACCAGTGTGATACGGTTGCCGGCAATAATGCCCGTGTGGACAACGGTATCACGCTGGTTTGTAATGGTCTACC
TGTTGTGCTGATCGCGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC-Type Transport System Permease Component; Permease Component; ABC Transporter; Abc-Type Transport System Permease Component; Multidrug Efflux Associated Membrane Protein

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MELVRLIAIFARVGILNEMQYRVNFFFQMLESAISLATGLIGLGLVFQHTTILAGWQPAELLVVMGIYVLMSGIVQAVIQ
PNMLRLAQDVLEGKLDYALTKPVDSQLLVSIREWQAWRFTNVVLGLLVVGWALVSLQASVSLGQIVLFVLMLGCGVVALY
AFWLILATTSFWVIQIESLINLFEGIFAAGRWPTSIYPGWLRAILTFLVPVAFAVTVPAEALTARLNSSTLALAVGVSFT
LFLLARLLWRWGVRRYSGASA

Sequences:

>Translated_261_residues
MELVRLIAIFARVGILNEMQYRVNFFFQMLESAISLATGLIGLGLVFQHTTILAGWQPAELLVVMGIYVLMSGIVQAVIQ
PNMLRLAQDVLEGKLDYALTKPVDSQLLVSIREWQAWRFTNVVLGLLVVGWALVSLQASVSLGQIVLFVLMLGCGVVALY
AFWLILATTSFWVIQIESLINLFEGIFAAGRWPTSIYPGWLRAILTFLVPVAFAVTVPAEALTARLNSSTLALAVGVSFT
LFLLARLLWRWGVRRYSGASA
>Mature_261_residues
MELVRLIAIFARVGILNEMQYRVNFFFQMLESAISLATGLIGLGLVFQHTTILAGWQPAELLVVMGIYVLMSGIVQAVIQ
PNMLRLAQDVLEGKLDYALTKPVDSQLLVSIREWQAWRFTNVVLGLLVVGWALVSLQASVSLGQIVLFVLMLGCGVVALY
AFWLILATTSFWVIQIESLINLFEGIFAAGRWPTSIYPGWLRAILTFLVPVAFAVTVPAEALTARLNSSTLALAVGVSFT
LFLLARLLWRWGVRRYSGASA

Specific function: Unknown

COG id: COG3694

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28807; Mature: 28807

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCHHHCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA