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The map label for this gene is sdpR [H]

Identifier: 222526752

GI number: 222526752

Start: 4389399

End: 4389698

Strand: Direct

Name: sdpR [H]

Synonym: Chy400_3526

Alternate gene names: 222526752

Gene position: 4389399-4389698 (Clockwise)

Preceding gene: 222526751

Following gene: 222526753

Centisome position: 83.31

GC content: 53.67

Gene sequence:

>300_bases
ATGGAACAGTCGATAACTCGCACTCTTCAGGCACTCTCGGATCCGACGCGGCGGGCGATCATTCGAATGCTCAACGAGCG
CGATATGACCGCTGGCGAAATTGCTGCCCACTTCGCGATCTCGGCACCGAGTGTTTCTCATCATTTGAATGTATTGAAAA
CAGCCGATCTGGTGACTGCCGAGCGACAGGGGCAGCGGATTGTGTATCGGTTAAATGCTACGGTTTTGCAAGAGATGCTC
AGTAGCTTGCTGGATTTATTGCGCATCGGCGTCGAGCGGAAGGAGGACGGACATGCGTAA

Upstream 100 bases:

>100_bases
AACTTGTTGAAAGAGAAGAATGAAATCCATGGGGCTAGACAGTGAGGATAGAGTACGGTATACTCATGTCAGGAATATTT
AGAAACTTGGCTAAATGTCT

Downstream 100 bases:

>100_bases
TCTACGGTTGATGCTGGTCGTTGTGGTGCTGATGTGGGGGTTTGGTCTGATCATGCTACCGTCCATTCCCGATCCGGCGC
CTATCCACTGGAATGCTGTA

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MEQSITRTLQALSDPTRRAIIRMLNERDMTAGEIAAHFAISAPSVSHHLNVLKTADLVTAERQGQRIVYRLNATVLQEML
SSLLDLLRIGVERKEDGHA

Sequences:

>Translated_99_residues
MEQSITRTLQALSDPTRRAIIRMLNERDMTAGEIAAHFAISAPSVSHHLNVLKTADLVTAERQGQRIVYRLNATVLQEML
SSLLDLLRIGVERKEDGHA
>Mature_99_residues
MEQSITRTLQALSDPTRRAIIRMLNERDMTAGEIAAHFAISAPSVSHHLNVLKTADLVTAERQGQRIVYRLNATVLQEML
SSLLDLLRIGVERKEDGHA

Specific function: Represses the transcription of the sdpIR operon and of several other operons that probably contribute to delaying commitment to sporulation [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11062; Mature: 11062

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQSITRTLQALSDPTRRAIIRMLNERDMTAGEIAAHFAISAPSVSHHLNVLKTADLVTA
CCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ERQGQRIVYRLNATVLQEMLSSLLDLLRIGVERKEDGHA
HHCCCEEEEHHCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEQSITRTLQALSDPTRRAIIRMLNERDMTAGEIAAHFAISAPSVSHHLNVLKTADLVTA
CCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ERQGQRIVYRLNATVLQEMLSSLLDLLRIGVERKEDGHA
HHCCCEEEEHHCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]