| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526751
Identifier: 222526751
GI number: 222526751
Start: 4388307
End: 4388813
Strand: Direct
Name: 222526751
Synonym: Chy400_3525
Alternate gene names: NA
Gene position: 4388307-4388813 (Clockwise)
Preceding gene: 222526749
Following gene: 222526752
Centisome position: 83.29
GC content: 59.37
Gene sequence:
>507_bases ATGATCTGTAACCCTGGCTCTGCTACCCCTGGTGTTGGTTGTGCAAGCGACCTGTGCGTCCGGGTGACATCACTATCGTT CAGGTGTGATCCTCGTGCTACGGTGTTAACAGGTATGCCATTGGCGAGTCGCCGGTGGATTGGTGTGGGTGTAGGGGCGA CGCATGCGTCGCCCCTACTGGCGCTGGTGCCGGGAAGCCATGCATTACCCATAACTGGCGTCAACCACGTGCGTATCAGC GAGTATGAACGCCACGGGTGCTGTTGTGGGCAACTGGCCCGGTGGCAACGCGCAGCTCCAGCCGTGCTATCACGTACTGG AAAGGTTGCCTTACGCGCCCATCATGTGCGTGTCGCAGGGTTTGGAGTGCGGCAGCCATGCTGCCGCGCCAGCCGTACAC ACGATCCGGCGCGTGTCACAACGTTCCTCATCCTGGTCACGGAGAAACTGGATGTGATCGTTTCGATCAGCGAGTCGGTC CGGCATGAATGCGATACCTGTGTGTAA
Upstream 100 bases:
>100_bases AGGGATCATATCTGCTCCTTATTATCAATAATAATATCGTTATCATTTATTCTAACAATAACCATACATCGTCGTCAAGA GGGATCGAGTCGGGTAAAAG
Downstream 100 bases:
>100_bases ACGTTTGGTTATACCAGGTTCGTGCCTGCGCACCATTGGCTACAGCCAGCACCTGACGGCGGTTGAGAGGATGCCTCCAC GCAGGCTGGAAGTCTGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MICNPGSATPGVGCASDLCVRVTSLSFRCDPRATVLTGMPLASRRWIGVGVGATHASPLLALVPGSHALPITGVNHVRIS EYERHGCCCGQLARWQRAAPAVLSRTGKVALRAHHVRVAGFGVRQPCCRASRTHDPARVTTFLILVTEKLDVIVSISESV RHECDTCV
Sequences:
>Translated_168_residues MICNPGSATPGVGCASDLCVRVTSLSFRCDPRATVLTGMPLASRRWIGVGVGATHASPLLALVPGSHALPITGVNHVRIS EYERHGCCCGQLARWQRAAPAVLSRTGKVALRAHHVRVAGFGVRQPCCRASRTHDPARVTTFLILVTEKLDVIVSISESV RHECDTCV >Mature_168_residues MICNPGSATPGVGCASDLCVRVTSLSFRCDPRATVLTGMPLASRRWIGVGVGATHASPLLALVPGSHALPITGVNHVRIS EYERHGCCCGQLARWQRAAPAVLSRTGKVALRAHHVRVAGFGVRQPCCRASRTHDPARVTTFLILVTEKLDVIVSISESV RHECDTCV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17917; Mature: 17917
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICNPGSATPGVGCASDLCVRVTSLSFRCDPRATVLTGMPLASRRWIGVGVGATHASPLL CCCCCCCCCCCCCCHHHHHHHEEHEEEECCCCCEEEECCCCCCCCEEEEECCCCCCCCEE ALVPGSHALPITGVNHVRISEYERHGCCCGQLARWQRAAPAVLSRTGKVALRAHHVRVAG EECCCCCCCEECCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHCCCCEEEEEEEEEEEC FGVRQPCCRASRTHDPARVTTFLILVTEKLDVIVSISESVRHECDTCV CCCCCHHHHCCCCCCCHHHHEEEEEEECCCEEEEECHHHHHHHCCCCC >Mature Secondary Structure MICNPGSATPGVGCASDLCVRVTSLSFRCDPRATVLTGMPLASRRWIGVGVGATHASPLL CCCCCCCCCCCCCCHHHHHHHEEHEEEECCCCCEEEECCCCCCCCEEEEECCCCCCCCEE ALVPGSHALPITGVNHVRISEYERHGCCCGQLARWQRAAPAVLSRTGKVALRAHHVRVAG EECCCCCCCEECCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHCCCCEEEEEEEEEEEC FGVRQPCCRASRTHDPARVTTFLILVTEKLDVIVSISESVRHECDTCV CCCCCHHHHCCCCCCCHHHHEEEEEEECCCEEEEECHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA