Click here to switch to the map view.

The map label for this gene is sdpI [H]

Identifier: 222526753

GI number: 222526753

Start: 4389691

End: 4390332

Strand: Direct

Name: sdpI [H]

Synonym: Chy400_3527

Alternate gene names: 222526753

Gene position: 4389691-4390332 (Clockwise)

Preceding gene: 222526752

Following gene: 222526754

Centisome position: 83.31

GC content: 54.05

Gene sequence:

>642_bases
ATGCGTAATCTACGGTTGATGCTGGTCGTTGTGGTGCTGATGTGGGGGTTTGGTCTGATCATGCTACCGTCCATTCCCGA
TCCGGCGCCTATCCACTGGAATGCTGTAGGTGAGGTAGATGGCTATGGCAGTCCGTGGATTGTAGCTTTGTTGCCACCAA
TCATGGCAACAATCATGGCTCTCCTGGCATTGGTGTTGCCACGCATCGACCCACGTGGTCAGGGGTATACGGGATTTTTC
CGTACCTATGCGCTGATTATGAACAGTCTGGTGCTGTTTTTTGCCGGGTTACAGGTCATTACGATTGGCGTGGCTGTGGG
ATGGCCGGTCAGCGTTCCGCGTCTACTAAGTGTGGGAATGTCACTCTTGATCATCGTGTTGGGTAACGAGTTAGGACGGG
TAACTCCCAACTATTTTGTCGGTATTCGTACACCGTGGACACTCGCCGATCCCGACGTCTGGCGCAAGACACATCGGGTT
GGGGCCAGGTTGTTTGTCGCTGGTGGTGGCCTGGCTGCTCTGTCCAGTCTGGTGGTGCCTGAAGCGTGGCTCTTCGTGGC
AACCTTGTTATTCGTGATCGTACCGGTGCTGGCAACGATTCCGTATTCGTATGTGGTCTGGCGGCAATTACGGAGTGGTT
AA

Upstream 100 bases:

>100_bases
CAGCGGATTGTGTATCGGTTAAATGCTACGGTTTTGCAAGAGATGCTCAGTAGCTTGCTGGATTTATTGCGCATCGGCGT
CGAGCGGAAGGAGGACGGAC

Downstream 100 bases:

>100_bases
GTATTTGCCGCGAAGAAGAGAAGGAAACGTGAATGGCTGCTCTCAATTGGCGAGGTATAGGCTGGTTTACTGGATTAGCA
ATGGGCTTCGCGTGGCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MRNLRLMLVVVVLMWGFGLIMLPSIPDPAPIHWNAVGEVDGYGSPWIVALLPPIMATIMALLALVLPRIDPRGQGYTGFF
RTYALIMNSLVLFFAGLQVITIGVAVGWPVSVPRLLSVGMSLLIIVLGNELGRVTPNYFVGIRTPWTLADPDVWRKTHRV
GARLFVAGGGLAALSSLVVPEAWLFVATLLFVIVPVLATIPYSYVVWRQLRSG

Sequences:

>Translated_213_residues
MRNLRLMLVVVVLMWGFGLIMLPSIPDPAPIHWNAVGEVDGYGSPWIVALLPPIMATIMALLALVLPRIDPRGQGYTGFF
RTYALIMNSLVLFFAGLQVITIGVAVGWPVSVPRLLSVGMSLLIIVLGNELGRVTPNYFVGIRTPWTLADPDVWRKTHRV
GARLFVAGGGLAALSSLVVPEAWLFVATLLFVIVPVLATIPYSYVVWRQLRSG
>Mature_213_residues
MRNLRLMLVVVVLMWGFGLIMLPSIPDPAPIHWNAVGEVDGYGSPWIVALLPPIMATIMALLALVLPRIDPRGQGYTGFF
RTYALIMNSLVLFFAGLQVITIGVAVGWPVSVPRLLSVGMSLLIIVLGNELGRVTPNYFVGIRTPWTLADPDVWRKTHRV
GARLFVAGGGLAALSSLVVPEAWLFVATLLFVIVPVLATIPYSYVVWRQLRSG

Specific function: Immunity protein that provides protection for the cell against the toxic effects of its own sdpC killing factor, and that functions as a receptor/signal transduction protein as well. Once sdpC accumulates in the extracellular milieu, sdpI binds to sdpC, c

COG id: COG5658

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012867 [H]

Pfam domain/function: PF07853 DUF1648 [H]

EC number: NA

Molecular weight: Translated: 23287; Mature: 23287

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLRLMLVVVVLMWGFGLIMLPSIPDPAPIHWNAVGEVDGYGSPWIVALLPPIMATIMA
CCCHHHHHHHHHHHHHHHHEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
LLALVLPRIDPRGQGYTGFFRTYALIMNSLVLFFAGLQVITIGVAVGWPVSVPRLLSVGM
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SLLIIVLGNELGRVTPNYFVGIRTPWTLADPDVWRKTHRVGARLFVAGGGLAALSSLVVP
HHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHH
EAWLFVATLLFVIVPVLATIPYSYVVWRQLRSG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MRNLRLMLVVVVLMWGFGLIMLPSIPDPAPIHWNAVGEVDGYGSPWIVALLPPIMATIMA
CCCHHHHHHHHHHHHHHHHEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
LLALVLPRIDPRGQGYTGFFRTYALIMNSLVLFFAGLQVITIGVAVGWPVSVPRLLSVGM
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SLLIIVLGNELGRVTPNYFVGIRTPWTLADPDVWRKTHRVGARLFVAGGGLAALSSLVVP
HHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHH
EAWLFVATLLFVIVPVLATIPYSYVVWRQLRSG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]