| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526733
Identifier: 222526733
GI number: 222526733
Start: 4366304
End: 4367236
Strand: Direct
Name: 222526733
Synonym: Chy400_3507
Alternate gene names: NA
Gene position: 4366304-4367236 (Clockwise)
Preceding gene: 222526731
Following gene: 222526745
Centisome position: 82.87
GC content: 54.98
Gene sequence:
>933_bases ATGTTTCATCGCCTCCCGTTTCTAAGCCAACGGATTGGTAACTTTGTAAGCTGGCGTCGTATTCCGCCACCACGCCGGAA GCTCTGGCTGCTTGGCACGGTCTTGATGCTGGTTGGTGCCGGCTTGCTAATCTATGTTTTATTCACCACACTACAAATAG AATATTATCGATGGGCGGCGCGCGGTGACTCGCCGCTACCTGCGCCACAGTTGACCACCAGTGGCTTTCGTCCGGCTGAT GCACGCCCGTTGCCGCTCCTGGCTGATGATACCGTTGCTGTCCCTGCACCAACTGCCGTCGGTGGCATGATTAATTCGAC GACTGTTACGAATGGTGTTCAGGCGATAGTGCCACGTTCAACCGGTGCCTTTGCCGGTGTGGACAGTGGCTTGCTGATTT CTGAGCCACCTGCACCGGTGCAAACCGATTGGGTGGCGACGGTTGAACGGCTGGTTATTCCGAAGATTAACGTTGACTCG AAAGTTATCGAGGTGGGCTGGGAGACGATTGAGGAAAATGGTCAGTTGATTTCGGTCTGGCAGGTTGCCGAATTCGCTGT GGGTCAACATCGCGGCTCGGCCAATCCCGGTGATGGCGACAACATTGTACTGGCGGGTCACGTTGGCGGCTATGGTCGGG TTTTCAAAGACCTCTTTTATCTCCAACCCGGTGATGAAGTGATTGTGTACAGTCGTGGCCAGCCTTACCGCTACATCGTT CACGAGCGTATTATCGTTGATGAAGAGGGAGTACCCGCCGAGCAGCGGCTGGCAAATGCACGCTACATTGCTCCCACCGG GTATGAAGTGGTGACGATGGTAACGTGTTGGCCGCCAAGTGGGCCGGACAAGTTCAAGCAGCGGGTGATTATACGGGCAT TACCGGTAACACCAGACGATGATGATACAACCACTCCTGGCAGCCGTCCCTAA
Upstream 100 bases:
>100_bases ACAACCCACATCCCGCCTCAGCGATCATACGTATATCAATCAGAACACATAGGGACGTGATATACTGAACACAAGAGTTG TGATATGAGGGTTAGCCATC
Downstream 100 bases:
>100_bases TCGTGGTGTGCTTCGTTGATTTGAGTCGTCTCAAGCATCTGCAGAATACTGGCTCCGCGGATGAAAACCCGGCGTAGTCC GGCAGGGCGGCTGGCGGCCA
Product: peptidase C60 sortase A and B
Products: NA
Alternate protein names: Sortase Family Protein
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MFHRLPFLSQRIGNFVSWRRIPPPRRKLWLLGTVLMLVGAGLLIYVLFTTLQIEYYRWAARGDSPLPAPQLTTSGFRPAD ARPLPLLADDTVAVPAPTAVGGMINSTTVTNGVQAIVPRSTGAFAGVDSGLLISEPPAPVQTDWVATVERLVIPKINVDS KVIEVGWETIEENGQLISVWQVAEFAVGQHRGSANPGDGDNIVLAGHVGGYGRVFKDLFYLQPGDEVIVYSRGQPYRYIV HERIIVDEEGVPAEQRLANARYIAPTGYEVVTMVTCWPPSGPDKFKQRVIIRALPVTPDDDDTTTPGSRP
Sequences:
>Translated_310_residues MFHRLPFLSQRIGNFVSWRRIPPPRRKLWLLGTVLMLVGAGLLIYVLFTTLQIEYYRWAARGDSPLPAPQLTTSGFRPAD ARPLPLLADDTVAVPAPTAVGGMINSTTVTNGVQAIVPRSTGAFAGVDSGLLISEPPAPVQTDWVATVERLVIPKINVDS KVIEVGWETIEENGQLISVWQVAEFAVGQHRGSANPGDGDNIVLAGHVGGYGRVFKDLFYLQPGDEVIVYSRGQPYRYIV HERIIVDEEGVPAEQRLANARYIAPTGYEVVTMVTCWPPSGPDKFKQRVIIRALPVTPDDDDTTTPGSRP >Mature_310_residues MFHRLPFLSQRIGNFVSWRRIPPPRRKLWLLGTVLMLVGAGLLIYVLFTTLQIEYYRWAARGDSPLPAPQLTTSGFRPAD ARPLPLLADDTVAVPAPTAVGGMINSTTVTNGVQAIVPRSTGAFAGVDSGLLISEPPAPVQTDWVATVERLVIPKINVDS KVIEVGWETIEENGQLISVWQVAEFAVGQHRGSANPGDGDNIVLAGHVGGYGRVFKDLFYLQPGDEVIVYSRGQPYRYIV HERIIVDEEGVPAEQRLANARYIAPTGYEVVTMVTCWPPSGPDKFKQRVIIRALPVTPDDDDTTTPGSRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33946; Mature: 33946
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHRLPFLSQRIGNFVSWRRIPPPRRKLWLLGTVLMLVGAGLLIYVLFTTLQIEYYRWAA CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEC RGDSPLPAPQLTTSGFRPADARPLPLLADDTVAVPAPTAVGGMINSTTVTNGVQAIVPRS CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEECCCCHHHCCCCCCCCCCCCEEEEEECC TGAFAGVDSGLLISEPPAPVQTDWVATVERLVIPKINVDSKVIEVGWETIEENGQLISVW CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCCCEEEEE QVAEFAVGQHRGSANPGDGDNIVLAGHVGGYGRVFKDLFYLQPGDEVIVYSRGQPYRYIV HHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHEECCCCEEEEEECCCCEEEEE HERIIVDEEGVPAEQRLANARYIAPTGYEVVTMVTCWPPSGPDKFKQRVIIRALPVTPDD EEEEEECCCCCCHHHHHCCCEEECCCCCEEEEEEEECCCCCHHHHHHEEEEEEECCCCCC DDTTTPGSRP CCCCCCCCCC >Mature Secondary Structure MFHRLPFLSQRIGNFVSWRRIPPPRRKLWLLGTVLMLVGAGLLIYVLFTTLQIEYYRWAA CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEC RGDSPLPAPQLTTSGFRPADARPLPLLADDTVAVPAPTAVGGMINSTTVTNGVQAIVPRS CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEECCCCHHHCCCCCCCCCCCCEEEEEECC TGAFAGVDSGLLISEPPAPVQTDWVATVERLVIPKINVDSKVIEVGWETIEENGQLISVW CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCCCEEEEE QVAEFAVGQHRGSANPGDGDNIVLAGHVGGYGRVFKDLFYLQPGDEVIVYSRGQPYRYIV HHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHEECCCCEEEEEECCCCEEEEE HERIIVDEEGVPAEQRLANARYIAPTGYEVVTMVTCWPPSGPDKFKQRVIIRALPVTPDD EEEEEECCCCCCHHHHHCCCEEECCCCCEEEEEEEECCCCCHHHHHHEEEEEEECCCCCC DDTTTPGSRP CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA