| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526731
Identifier: 222526731
GI number: 222526731
Start: 4365052
End: 4365540
Strand: Direct
Name: 222526731
Synonym: Chy400_3505
Alternate gene names: NA
Gene position: 4365052-4365540 (Clockwise)
Preceding gene: 222526730
Following gene: 222526733
Centisome position: 82.84
GC content: 56.44
Gene sequence:
>489_bases ATGAAGATTACATTGCGCATGATGGTCCTGGCCGTATTAACGGCGATGGCAATGGTGCTGGCTGCCTGCGGTGGTGGCGG GAGTAGCGGTGGCTCTACCGGTGGTGGTTCCGGTAGCGGGCCGGTAACGATTGAAATCGGCTCAAAGGGTGAAGAGCTTG CCTTTGACAAAACAGAGTTGACAGTTTCTGCCGGTCAAACTGTAACCATTCGCTTCAAGAATAACTCGGCTGTTCAGCAG CACAACTGGATTCTGGTCAAGGGTGGTGAGGCCGAGGCTGCCAACATTGCTAACGCCGGTCTGAGCGCCGGCCCGGCGGC CAACTATTTGCCGGCTGACAAGAGCAACATCATTGCCGAGTCGCCGCTGGCTAACGGTAACGAGACGGTAGAGGTCACCT TCACTGCCCCAGCCGCCGGTACGTACCTCTACATTTGTACGGTGCCCGGTCACTACCCACTGATGCAGGGTAAGCTGGTC GTTAACTAA
Upstream 100 bases:
>100_bases TCTGAAAGAGCGGTGCTGATCAGCTTGACAATGGTTAAGATAGTGGTATAAATGTTGACGTGTATACTTGTGATAGATGC CACAAGGAAGGAAGCAACCG
Downstream 100 bases:
>100_bases AAATACAGTTTCGCTGAAACGCCGGAATCCAGGGCACGACTATATGCCCTGGATTTCTATTGTTGGCGAATTCAAACGGA ACACTATACAATCCTTAATA
Product: blue (type 1) copper domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKITLRMMVLAVLTAMAMVLAACGGGGSSGGSTGGGSGSGPVTIEIGSKGEELAFDKTELTVSAGQTVTIRFKNNSAVQQ HNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYPLMQGKLV VN
Sequences:
>Translated_162_residues MKITLRMMVLAVLTAMAMVLAACGGGGSSGGSTGGGSGSGPVTIEIGSKGEELAFDKTELTVSAGQTVTIRFKNNSAVQQ HNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYPLMQGKLV VN >Mature_162_residues MKITLRMMVLAVLTAMAMVLAACGGGGSSGGSTGGGSGSGPVTIEIGSKGEELAFDKTELTVSAGQTVTIRFKNNSAVQQ HNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYPLMQGKLV VN
Specific function: Can donate electrons to cytochrome c-554
COG id: COG3241
COG function: function code C; Azurin
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 plastocyanin-like domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AURA_CHLAA (Q8RMH6)
Other databases:
- EMBL: AF494277 - EMBL: CP000909 - PIR: B42418 - RefSeq: YP_001636825.1 - PDB: 2AAN - PDBsum: 2AAN - ProteinModelPortal: Q8RMH6 - SMR: Q8RMH6 - GeneID: 5825050 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_3248 - HOGENOM: HBG653810 - OMA: VCAVSID - ProtClustDB: CLSK974143 - GO: GO:0006810 - InterPro: IPR000923 - InterPro: IPR008972 - Gene3D: G3DSA:2.60.40.420
Pfam domain/function: PF00127 Copper-bind; SSF49503 Cupredoxin
EC number: NA
Molecular weight: Translated: 16371; Mature: 16371
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: PS00196 COPPER_BLUE; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITLRMMVLAVLTAMAMVLAACGGGGSSGGSTGGGSGSGPVTIEIGSKGEELAFDKTEL CEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCEEE TVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAE EEECCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC SPLANGNETVEVTFTAPAAGTYLYICTVPGHYPLMQGKLVVN CCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEECCEEEEC >Mature Secondary Structure MKITLRMMVLAVLTAMAMVLAACGGGGSSGGSTGGGSGSGPVTIEIGSKGEELAFDKTEL CEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCEEE TVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAE EEECCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC SPLANGNETVEVTFTAPAAGTYLYICTVPGHYPLMQGKLVVN CCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10338005