Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222526731

Identifier: 222526731

GI number: 222526731

Start: 4365052

End: 4365540

Strand: Direct

Name: 222526731

Synonym: Chy400_3505

Alternate gene names: NA

Gene position: 4365052-4365540 (Clockwise)

Preceding gene: 222526730

Following gene: 222526733

Centisome position: 82.84

GC content: 56.44

Gene sequence:

>489_bases
ATGAAGATTACATTGCGCATGATGGTCCTGGCCGTATTAACGGCGATGGCAATGGTGCTGGCTGCCTGCGGTGGTGGCGG
GAGTAGCGGTGGCTCTACCGGTGGTGGTTCCGGTAGCGGGCCGGTAACGATTGAAATCGGCTCAAAGGGTGAAGAGCTTG
CCTTTGACAAAACAGAGTTGACAGTTTCTGCCGGTCAAACTGTAACCATTCGCTTCAAGAATAACTCGGCTGTTCAGCAG
CACAACTGGATTCTGGTCAAGGGTGGTGAGGCCGAGGCTGCCAACATTGCTAACGCCGGTCTGAGCGCCGGCCCGGCGGC
CAACTATTTGCCGGCTGACAAGAGCAACATCATTGCCGAGTCGCCGCTGGCTAACGGTAACGAGACGGTAGAGGTCACCT
TCACTGCCCCAGCCGCCGGTACGTACCTCTACATTTGTACGGTGCCCGGTCACTACCCACTGATGCAGGGTAAGCTGGTC
GTTAACTAA

Upstream 100 bases:

>100_bases
TCTGAAAGAGCGGTGCTGATCAGCTTGACAATGGTTAAGATAGTGGTATAAATGTTGACGTGTATACTTGTGATAGATGC
CACAAGGAAGGAAGCAACCG

Downstream 100 bases:

>100_bases
AAATACAGTTTCGCTGAAACGCCGGAATCCAGGGCACGACTATATGCCCTGGATTTCTATTGTTGGCGAATTCAAACGGA
ACACTATACAATCCTTAATA

Product: blue (type 1) copper domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MKITLRMMVLAVLTAMAMVLAACGGGGSSGGSTGGGSGSGPVTIEIGSKGEELAFDKTELTVSAGQTVTIRFKNNSAVQQ
HNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYPLMQGKLV
VN

Sequences:

>Translated_162_residues
MKITLRMMVLAVLTAMAMVLAACGGGGSSGGSTGGGSGSGPVTIEIGSKGEELAFDKTELTVSAGQTVTIRFKNNSAVQQ
HNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYPLMQGKLV
VN
>Mature_162_residues
MKITLRMMVLAVLTAMAMVLAACGGGGSSGGSTGGGSGSGPVTIEIGSKGEELAFDKTELTVSAGQTVTIRFKNNSAVQQ
HNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYPLMQGKLV
VN

Specific function: Can donate electrons to cytochrome c-554

COG id: COG3241

COG function: function code C; Azurin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 plastocyanin-like domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): AURA_CHLAA (Q8RMH6)

Other databases:

- EMBL:   AF494277
- EMBL:   CP000909
- PIR:   B42418
- RefSeq:   YP_001636825.1
- PDB:   2AAN
- PDBsum:   2AAN
- ProteinModelPortal:   Q8RMH6
- SMR:   Q8RMH6
- GeneID:   5825050
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_3248
- HOGENOM:   HBG653810
- OMA:   VCAVSID
- ProtClustDB:   CLSK974143
- GO:   GO:0006810
- InterPro:   IPR000923
- InterPro:   IPR008972
- Gene3D:   G3DSA:2.60.40.420

Pfam domain/function: PF00127 Copper-bind; SSF49503 Cupredoxin

EC number: NA

Molecular weight: Translated: 16371; Mature: 16371

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS00196 COPPER_BLUE; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITLRMMVLAVLTAMAMVLAACGGGGSSGGSTGGGSGSGPVTIEIGSKGEELAFDKTEL
CEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCEEE
TVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAE
EEECCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
SPLANGNETVEVTFTAPAAGTYLYICTVPGHYPLMQGKLVVN
CCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEECCEEEEC
>Mature Secondary Structure
MKITLRMMVLAVLTAMAMVLAACGGGGSSGGSTGGGSGSGPVTIEIGSKGEELAFDKTEL
CEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCEEE
TVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAE
EEECCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
SPLANGNETVEVTFTAPAAGTYLYICTVPGHYPLMQGKLVVN
CCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10338005